; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G06100 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G06100
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTubulin-specific chaperone A
Genome locationChr6:5375459..5378839
RNA-Seq ExpressionCSPI06G06100
SyntenyCSPI06G06100
Gene Ontology termsGO:0007021 - tubulin complex assembly (biological process)
GO:0007023 - post-chaperonin tubulin folding pathway (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0048487 - beta-tubulin binding (molecular function)
InterPro domainsIPR004226 - Tubulin binding cofactor A
IPR036126 - Tubulin binding cofactor A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039980.1 tubulin-folding cofactor A [Cucumis melo var. makuwa]2.3e-5094.69Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLK+ALAELEKST+EKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST

Query:  INDVESFLKPIEE
        IND+ESFLKP EE
Subjt:  INDVESFLKPIEE

TYK24522.1 tubulin-folding cofactor A [Cucumis melo var. makuwa]3.1e-7170.35Show/hide
Query:  MHNFQYAKISSAVGSSILTLKFFFFFTGKNTSHA----LSLRAAQLAGSPSHSSDYLSRRTSTPSCARTNSLPAAFLPSIPPNPSTGFSGSPPAILCAAG
        MHNFQYAKISS+VG      +     + K+   +    LSL    L  +    +             R NS PAA LPSIP +P TGFSGS  AIL AAG
Subjt:  MHNFQYAKISSAVGSSILTLKFFFFFTGKNTSHA----LSLRAAQLAGSPSHSSDYLSRRTSTPSCARTNSLPAAFLPSIPPNPSTGFSGSPPAILCAAG

Query:  SYRRYSHRILALGMATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKST
        +YRR+S+RILALGMATVKNLKIKTATCKRILKELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLK+ALAELEKST
Subjt:  SYRRYSHRILALGMATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKST

Query:  QEKGPEFDDARSTINDVESFLKPIEE
        +EKGPEFDDARSTIND+ESFLKP EE
Subjt:  QEKGPEFDDARSTINDVESFLKPIEE

XP_004145016.1 tubulin-folding cofactor A isoform X2 [Cucumis sativus]3.3e-5799.17Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST

Query:  INDVESFLKPIEELCSGFVTA
        INDVESFLKPIEELCSG VTA
Subjt:  INDVESFLKPIEELCSGFVTA

XP_008460084.1 PREDICTED: tubulin-folding cofactor A [Cucumis melo]5.1e-5093.81Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLK+ALA+LEKST+EKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST

Query:  INDVESFLKPIEE
        IND+ESFLKP EE
Subjt:  INDVESFLKPIEE

XP_022155762.1 tubulin-folding cofactor A [Momordica charantia]1.7e-4587.61Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
        MATV+NLKIKTATCKRI+KEL SYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLE +LADLK ALAELE+STQEKGPEFD+ARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST

Query:  INDVESFLKPIEE
        I++VE+FLK  EE
Subjt:  INDVESFLKPIEE

TrEMBL top hitse value%identityAlignment
A0A0A0KER0 Tubulin-specific chaperone A3.0e-11299.1Show/hide
Query:  SSAVGSSILTLKFFFFFTGKNTSHALSLRAAQLAGSPSHSSDYLSRRTSTPSCARTNSLPAAFLPSIPPNPSTGFSGSPPAILCAAGSYRRYSHRILALG
        SSAVGSSILTLK FFFFTGKNTSHALSLRAAQLAGSPSHSSDYLSRRTSTPSCARTNSLPAAFLPSIPPNPSTGFSGSPPAILCAAGSYRRYSHRILALG
Subjt:  SSAVGSSILTLKFFFFFTGKNTSHALSLRAAQLAGSPSHSSDYLSRRTSTPSCARTNSLPAAFLPSIPPNPSTGFSGSPPAILCAAGSYRRYSHRILALG

Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST

Query:  INDVESFLKPIEELCSGFVTA
        INDVESFLKPIEELCSG VTA
Subjt:  INDVESFLKPIEELCSGFVTA

A0A1S3CBQ5 Tubulin-specific chaperone A2.5e-5093.81Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLK+ALA+LEKST+EKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST

Query:  INDVESFLKPIEE
        IND+ESFLKP EE
Subjt:  INDVESFLKPIEE

A0A5A7T9L5 Tubulin-specific chaperone A1.1e-5094.69Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
        MATVKNLKIKTATCKRILKELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLK+ALAELEKST+EKGPEFDDARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST

Query:  INDVESFLKPIEE
        IND+ESFLKP EE
Subjt:  INDVESFLKPIEE

A0A5D3DLX2 Tubulin-specific chaperone A1.5e-7170.35Show/hide
Query:  MHNFQYAKISSAVGSSILTLKFFFFFTGKNTSHA----LSLRAAQLAGSPSHSSDYLSRRTSTPSCARTNSLPAAFLPSIPPNPSTGFSGSPPAILCAAG
        MHNFQYAKISS+VG      +     + K+   +    LSL    L  +    +             R NS PAA LPSIP +P TGFSGS  AIL AAG
Subjt:  MHNFQYAKISSAVGSSILTLKFFFFFTGKNTSHA----LSLRAAQLAGSPSHSSDYLSRRTSTPSCARTNSLPAAFLPSIPPNPSTGFSGSPPAILCAAG

Query:  SYRRYSHRILALGMATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKST
        +YRR+S+RILALGMATVKNLKIKTATCKRILKELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLK+ALAELEKST
Subjt:  SYRRYSHRILALGMATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKST

Query:  QEKGPEFDDARSTINDVESFLKPIEE
        +EKGPEFDDARSTIND+ESFLKP EE
Subjt:  QEKGPEFDDARSTINDVESFLKPIEE

A0A6J1DQ83 Tubulin-specific chaperone A8.3e-4687.61Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
        MATV+NLKIKTATCKRI+KEL SYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLE +LADLK ALAELE+STQEKGPEFD+ARST
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST

Query:  INDVESFLKPIEE
        I++VE+FLK  EE
Subjt:  INDVESFLKPIEE

SwissProt top hitse value%identityAlignment
O04350 Tubulin-folding cofactor A2.2e-4078.1Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
        MAT++NLKIKT+TCKRI+KEL SYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLE ALADLK  LAELE++ +++GPE +DA+ T
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST

Query:  INDVE
        + DVE
Subjt:  INDVE

O75347 Tubulin-specific chaperone A3.1e-1342.16Show/hide
Query:  VKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTIND
        V+ +KIKT   KR++KE   YEKE +++  K   M+ +  + YD+K+Q  +L ESRMM+PDC +RLE A  DL+  L E EK  +E   E+ +AR  ++ 
Subjt:  VKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTIND

Query:  VE
        V+
Subjt:  VE

P48428 Tubulin-specific chaperone A8.9e-1341.18Show/hide
Query:  VKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTIND
        V+ +KIKT   +R++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+PDC +RLE A  DL+  L E EK  +E   E+ +AR  ++ 
Subjt:  VKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTIND

Query:  VE
        V+
Subjt:  VE

P80585 Tubulin-specific chaperone A6.2e-1444.12Show/hide
Query:  VKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTIND
        ++ +KIKT   KR+ KE   YEKE +++  K   MK +  D Y +K+Q  +L ESRMM+PDC +RLE A ADL   L E EK  +E   E+ +ARS +  
Subjt:  VKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTIND

Query:  VE
        V+
Subjt:  VE

Q6PEC1 Tubulin-specific chaperone A3.1e-1342.16Show/hide
Query:  VKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTIND
        V+ +KIKT   KR++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+PDC +RLE A  DL+  L E EK  +E   E+ +AR  ++ 
Subjt:  VKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTIND

Query:  VE
        V+
Subjt:  VE

Arabidopsis top hitse value%identityAlignment
AT2G30410.1 tubulin folding cofactor A (KIESEL)1.6e-4178.1Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
        MAT++NLKIKT+TCKRI+KEL SYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLE ALADLK  LAELE++ +++GPE +DA+ T
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST

Query:  INDVE
        + DVE
Subjt:  INDVE

AT2G30410.2 tubulin folding cofactor A (KIESEL)1.6e-4178.1Show/hide
Query:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST
        MAT++NLKIKT+TCKRI+KEL SYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLE ALADLK  LAELE++ +++GPE +DA+ T
Subjt:  MATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARST

Query:  INDVE
        + DVE
Subjt:  INDVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAACTTCCAATATGCCAAAATTAGTTCTGCGGTTGGCTCAAGTATTCTCACTTTAAAGTTCTTCTTCTTCTTCACGGGAAAAAACACCTCCCACGCTCTCTCTCT
GCGCGCCGCTCAACTTGCCGGATCTCCCTCTCACTCTAGCGATTATCTCTCTCGCCGGACGTCGACTCCCAGCTGTGCACGTACGAACTCCCTCCCGGCCGCGTTTCTTC
CGTCTATACCGCCAAACCCGAGCACTGGTTTTTCTGGCTCGCCCCCTGCTATTCTTTGCGCCGCTGGGTCTTATCGTCGCTATTCTCACCGGATCTTGGCTTTGGGTATG
GCTACTGTAAAGAACCTTAAGATTAAGACAGCTACCTGCAAACGCATTCTCAAGGAGTTGTTTTCTTATGAGAAGGAGGTTGAGAGAGAAGCTGCCAAAACTGCTGACAT
GAAAGAAAAAGGTGCTGACCCTTATGACCTTAAACAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTAGAGTTTGCCTTAGCTG
ATCTGAAAGATGCCCTGGCTGAACTGGAAAAATCAACACAAGAGAAAGGTCCAGAGTTCGATGATGCTCGGAGTACAATCAACGATGTTGAAAGTTTCCTAAAGCCAATA
GAGGAATTGTGTAGTGGGTTTGTCACCGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATAACTTCCAATATGCCAAAATTAGTTCTGCGGTTGGCTCAAGTATTCTCACTTTAAAGTTCTTCTTCTTCTTCACGGGAAAAAACACCTCCCACGCTCTCTCTCT
GCGCGCCGCTCAACTTGCCGGATCTCCCTCTCACTCTAGCGATTATCTCTCTCGCCGGACGTCGACTCCCAGCTGTGCACGTACGAACTCCCTCCCGGCCGCGTTTCTTC
CGTCTATACCGCCAAACCCGAGCACTGGTTTTTCTGGCTCGCCCCCTGCTATTCTTTGCGCCGCTGGGTCTTATCGTCGCTATTCTCACCGGATCTTGGCTTTGGGTATG
GCTACTGTAAAGAACCTTAAGATTAAGACAGCTACCTGCAAACGCATTCTCAAGGAGTTGTTTTCTTATGAGAAGGAGGTTGAGAGAGAAGCTGCCAAAACTGCTGACAT
GAAAGAAAAAGGTGCTGACCCTTATGACCTTAAACAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTCTAGAGTTTGCCTTAGCTG
ATCTGAAAGATGCCCTGGCTGAACTGGAAAAATCAACACAAGAGAAAGGTCCAGAGTTCGATGATGCTCGGAGTACAATCAACGATGTTGAAAGTTTCCTAAAGCCAATA
GAGGAATTGTGTAGTGGGTTTGTCACCGCCTGA
Protein sequenceShow/hide protein sequence
MHNFQYAKISSAVGSSILTLKFFFFFTGKNTSHALSLRAAQLAGSPSHSSDYLSRRTSTPSCARTNSLPAAFLPSIPPNPSTGFSGSPPAILCAAGSYRRYSHRILALGM
ATVKNLKIKTATCKRILKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLEFALADLKDALAELEKSTQEKGPEFDDARSTINDVESFLKPI
EELCSGFVTA