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CSPI06G06330 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G06330
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description10 kDa chaperonin-like
Genome locationChr6:5536997..5539802
RNA-Seq ExpressionCSPI06G06330
SyntenyCSPI06G06330
Gene Ontology termsGO:0051085 - chaperone cofactor-dependent protein refolding (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR011032 - GroES-like superfamily
IPR020818 - GroES chaperonin family
IPR037124 - GroES chaperonin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34095.1 chloroplast chaperonin [Cucumis melo subsp. melo]5.1e-6699.25Show/hide
Query:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
        MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
Subjt:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVV+
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

KAE8646718.1 hypothetical protein Csa_005009 [Cucumis sativus]3.4e-62100Show/hide
Query:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
        MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
Subjt:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKA
        KVLFSDISAYEVDLGTDAKHVFCKA
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKA

XP_004145027.1 10 kDa chaperonin 1, chloroplastic [Cucumis sativus]2.3e-66100Show/hide
Query:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
        MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
Subjt:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

XP_023006781.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita maxima]1.1e-6092.48Show/hide
Query:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
        MASMFLTVKPFVNK + PT SN+R+ STRR SLKVCAV KKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG+LGQGK
Subjt:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

XP_038906447.1 10 kDa chaperonin 1, chloroplastic-like [Benincasa hispida]1.7e-6193.23Show/hide
Query:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
        MASMFLTVKPFVNK + PTFSNQRLHSTRR SLKVCAV KKLEP KVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILS GADAG+LG+GK
Subjt:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

TrEMBL top hitse value%identityAlignment
A0A0A0KET7 Uncharacterized protein1.1e-66100Show/hide
Query:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
        MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
Subjt:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

A0A1S4E2Q1 10 kDa chaperonin-like1.1e-66100Show/hide
Query:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
        MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
Subjt:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

A0A5D3DLT2 Chloroplast chaperonin1.1e-66100Show/hide
Query:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
        MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
Subjt:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

A0A6J1KWR7 10 kDa chaperonin 1, chloroplastic-like5.3e-6192.48Show/hide
Query:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
        MASMFLTVKPFVNK + PT SN+R+ STRR SLKVCAV KKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG+LGQGK
Subjt:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

E5GC96 Chloroplast chaperonin2.5e-6699.25Show/hide
Query:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
        MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK
Subjt:  MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGK

Query:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
        KVLFSDISAYEVDLGTDAKHVFCKASDLLAVV+
Subjt:  KVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

SwissProt top hitse value%identityAlignment
A5GNB0 10 kDa chaperonin7.7e-0937Show/hide
Query:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGDLGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV
        L  + V P GDRV +++ E  EK+AGG+LLP +A   E+  +GE++  G           A ++G G KVL+S  +  ++ LG+D ++V     D+LAVV
Subjt:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGDLGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV

O80504 10 kDa chaperonin 2, chloroplastic1.2e-3861.15Show/hide
Query:  MASMFLTVKP-----FVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG-
        MAS F+   P     F  K  TP+ +N  L  +RR  L++ A+  K EP KVVPQ DRVL+RLE+LP KS+GGVLLPK+AVKFERYL GEI+S G++ G 
Subjt:  MASMFLTVKP-----FVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG-

Query:  DLGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
         +G GK+VLFSD+SAYEVDLGTDA+H FCK SDLLA+VE
Subjt:  DLGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

Q0I7U2 10 kDa chaperonin7.7e-0937Show/hide
Query:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGDLGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV
        L  + V P GDRV +++ E  EK+AGG+LLP +A   E+  +GE++  G           A ++G G KVL+S  +  ++ LG+D ++V     D+LAVV
Subjt:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGDLGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV

Q7TV92 10 kDa chaperonin1.0e-0838Show/hide
Query:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGDLGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV
        L  + V P GDRV I++ E  EK+AGG+LLP +A   E+  +GE+   G           A ++G G KVL+S  +  ++ LG+D ++V     D+LAVV
Subjt:  LEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTG---------ADAGDLGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVV

Q9M1C2 10 kDa chaperonin 1, chloroplastic7.6e-4165.22Show/hide
Query:  MASMFLTV-KPFVN---KFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDL
        MAS F+TV KPF++   K   PT   Q L   RR S ++ AV  K EPAKVVPQ DRVL+RLE LPEKS+GGVLLPKSAVKFERYL GE++S G++ G++
Subjt:  MASMFLTV-KPFVN---KFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDL

Query:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLLAVVE
          GKKVLFSD+SAYEVD GT DAKH FCK SDLLA+V+
Subjt:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLLAVVE

Arabidopsis top hitse value%identityAlignment
AT2G44650.1 chloroplast chaperonin 108.7e-4061.15Show/hide
Query:  MASMFLTVKP-----FVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG-
        MAS F+   P     F  K  TP+ +N  L  +RR  L++ A+  K EP KVVPQ DRVL+RLE+LP KS+GGVLLPK+AVKFERYL GEI+S G++ G 
Subjt:  MASMFLTVKP-----FVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAG-

Query:  DLGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE
         +G GK+VLFSD+SAYEVDLGTDA+H FCK SDLLA+VE
Subjt:  DLGQGKKVLFSDISAYEVDLGTDAKHVFCKASDLLAVVE

AT3G60210.1 GroES-like family protein5.4e-4265.22Show/hide
Query:  MASMFLTV-KPFVN---KFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDL
        MAS F+TV KPF++   K   PT   Q L   RR S ++ AV  K EPAKVVPQ DRVL+RLE LPEKS+GGVLLPKSAVKFERYL GE++S G++ G++
Subjt:  MASMFLTV-KPFVN---KFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDL

Query:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLLAVVE
          GKKVLFSD+SAYEVD GT DAKH FCK SDLLA+V+
Subjt:  GQGKKVLFSDISAYEVDLGT-DAKHVFCKASDLLAVVE

AT5G20720.1 chaperonin 206.7e-0829.37Show/hide
Query:  KFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVK----FERYLLGEILSTGADAGDL--GQGKKVLFSDI
        KF +      R    RR+ +K  +V    +   + P GDRVL++++E  EK+ GG+LLP +A       E   +GE  + G +  D+    G ++++S  
Subjt:  KFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVK----FERYLLGEILSTGADAGDL--GQGKKVLFSDI

Query:  SAYEVDLGTDAKHVFCKASDLLAVVE
        +  EV+   D KH+  K  D++ ++E
Subjt:  SAYEVDLGTDAKHVFCKASDLLAVVE

AT5G20720.2 chaperonin 206.7e-0829.37Show/hide
Query:  KFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVK----FERYLLGEILSTGADAGDL--GQGKKVLFSDI
        KF +      R    RR+ +K  +V    +   + P GDRVL++++E  EK+ GG+LLP +A       E   +GE  + G +  D+    G ++++S  
Subjt:  KFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVK----FERYLLGEILSTGADAGDL--GQGKKVLFSDI

Query:  SAYEVDLGTDAKHVFCKASDLLAVVE
        +  EV+   D KH+  K  D++ ++E
Subjt:  SAYEVDLGTDAKHVFCKASDLLAVVE

AT5G20720.3 chaperonin 206.7e-0829.37Show/hide
Query:  KFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVK----FERYLLGEILSTGADAGDL--GQGKKVLFSDI
        KF +      R    RR+ +K  +V    +   + P GDRVL++++E  EK+ GG+LLP +A       E   +GE  + G +  D+    G ++++S  
Subjt:  KFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVK----FERYLLGEILSTGADAGDL--GQGKKVLFSDI

Query:  SAYEVDLGTDAKHVFCKASDLLAVVE
        +  EV+   D KH+  K  D++ ++E
Subjt:  SAYEVDLGTDAKHVFCKASDLLAVVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTATGTTCTTGACTGTGAAGCCTTTTGTGAACAAATTTGAAACACCCACTTTCTCTAATCAGAGATTACACAGCACTCGGAGAATTTCCCTTAAAGTCTGTGC
AGTGGGGAAGAAATTGGAACCCGCCAAGGTTGTTCCACAAGGGGATAGAGTTCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTTCTACTTCCCAAGT
CAGCTGTTAAATTCGAGCGTTATCTTTTAGGAGAGATCCTCTCTACAGGTGCTGATGCCGGGGATTTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGACATAAGTGCTTAT
GAGGTGGATTTAGGCACAGATGCAAAACACGTCTTCTGCAAAGCAAGTGATTTACTGGCTGTAGTTGAGTAA
mRNA sequenceShow/hide mRNA sequence
TAGTATTGTAATTAATTCCTTTCTCTACCAAATAAAATAGATGTTGGGTTTAGGGTTTAGAATCTTATAGAACATTCTAGATTGATAATCCATTTTATCGTTACACAATC
TCTACCCATCTCTTCCACTTGGACGGGTTTAACGCATTTCCATTTCCGTTGCCTCTGCAGCTTCTTCCAAACCTCTTGCCTCCGCCGTTTAGCTTACTACCTTATCCATG
GCGTCTATGTTCTTGACTGTGAAGCCTTTTGTGAACAAATTTGAAACACCCACTTTCTCTAATCAGAGATTACACAGCACTCGGAGAATTTCCCTTAAAGTCTGTGCAGT
GGGGAAGAAATTGGAACCCGCCAAGGTTGTTCCACAAGGGGATAGAGTTCTCATTCGGCTCGAGGAGCTTCCTGAGAAATCAGCAGGAGGAGTTCTACTTCCCAAGTCAG
CTGTTAAATTCGAGCGTTATCTTTTAGGAGAGATCCTCTCTACAGGTGCTGATGCCGGGGATTTGGGGCAAGGAAAGAAGGTTCTTTTCTCAGACATAAGTGCTTATGAG
GTGGATTTAGGCACAGATGCAAAACACGTCTTCTGCAAAGCAAGTGATTTACTGGCTGTAGTTGAGTAAGCTTTAGGTTACCCTTATTCTTTTGTAAGGCAGAAGGATTT
TTCATTGCTGTGGCTACAAAATGTAGTTGAATATTATATATTTTTGAAGTCTCTGACTCAGTTCCATGGAGATACTATTTCTCTCAGCCTAAAAGATATTCAGTCTGCTT
TCACTAATTTATAGAATTTTGATTTCTCAATGGTAAAA
Protein sequenceShow/hide protein sequence
MASMFLTVKPFVNKFETPTFSNQRLHSTRRISLKVCAVGKKLEPAKVVPQGDRVLIRLEELPEKSAGGVLLPKSAVKFERYLLGEILSTGADAGDLGQGKKVLFSDISAY
EVDLGTDAKHVFCKASDLLAVVE