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CSPI06G06540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G06540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAgglutinin domain-containing protein
Genome locationChr6:5679262..5679768
RNA-Seq ExpressionCSPI06G06540
SyntenyCSPI06G06540
Gene Ontology termsNA
InterPro domainsIPR004991 - Aerolysin-like toxin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646724.1 hypothetical protein Csa_005243 [Cucumis sativus]1.3e-3962.59Show/hide
Query:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT
        MAT+ A N    E  MAVSLKY+ E SK WESS+  G G   S+KA IPEI +  I+++YN E S+TWG+TI+E  REV ATYTV VPP TR KVTL AT
Subjt:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT

Query:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP
        KAKCD+ FSYTQRD+L +GR+V T+ DDGLY+ V T+ FDYQNKPLP
Subjt:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP

XP_004140600.1 uncharacterized protein LOC101212789 [Cucumis sativus]4.3e-5472.79Show/hide
Query:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT
        MAT++A+NGG  EASMA+SLKYVVE SKCWESS+   WG + SVKA +PEI E G+E+N+NEE+S +WG+TIT+ MREVMATYTVNVPPMT+ KVTL AT
Subjt:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT

Query:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP
        KAKCDV FSYTQRDVL DG  VI DCDDGLY+ V+TYNFDY+NKP P
Subjt:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP

XP_004145086.3 uncharacterized protein LOC105434387 [Cucumis sativus]3.0e-3961.9Show/hide
Query:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT
        MAT+ A N    E  MAVSL+Y+ E SK WESS+  G G   S+KA IPEI +  I+++YN E S+TWG+TI+E  REV ATYTV VPP TR KVTL AT
Subjt:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT

Query:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP
        KAKCD+ FSYTQRD+L +GR+V T+ DDGLY+ V T+ FDYQNKPLP
Subjt:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP

XP_011656733.2 uncharacterized protein LOC101208849 [Cucumis sativus]3.0e-3961.22Show/hide
Query:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT
        MAT+ A N    E  MAVSLKY+ E SK WESS+  G G   S+KA IPEI +  I+++YN E ++TWG+TI+E  REV ATYTV VPP TR KVTL AT
Subjt:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT

Query:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP
        KAKCD+ FSYTQRD+L +GR+V  +CDDGLY+ V T+ FDYQNKP P
Subjt:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP

XP_038875125.1 uncharacterized protein LOC120067657 [Benincasa hispida]1.5e-5475.51Show/hide
Query:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT
        MAT  A+NG   E SMAVSLKYVVETSKCWESS+ AGWG   S+KA IPEIAE GIE+NYNEE+SHTWG+TITE M+EVM TYTV+VP  TR KVTL  T
Subjt:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT

Query:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP
        KAKCDV FSYT+RDV  DG+QVITDCDDGLY  VN+Y FDYQNKPLP
Subjt:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP

TrEMBL top hitse value%identityAlignment
A0A0A0K975 Uncharacterized protein2.1e-7597.28Show/hide
Query:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT
        MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVS+KA IPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYT+NVPPMTRRKVTLSAT
Subjt:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT

Query:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP
        KAKCDVLF YTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP
Subjt:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP

A0A0A0KD53 Uncharacterized protein1.4e-3961.22Show/hide
Query:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT
        MAT+ A N    E  MAVSLKY+ E SK WESS+  G G   S+KA IPEI +  I+++YN E ++TWG+TI+E  REV ATYTV VPP TR KVTL AT
Subjt:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT

Query:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP
        KAKCD+ FSYTQRD+L +GR+V  +CDDGLY+ V T+ FDYQNKP P
Subjt:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP

A0A0A0KEW1 Agglutinin domain-containing protein1.4e-3961.9Show/hide
Query:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT
        MAT+ A N    E  MAVSL+Y+ E SK WESS+  G G   S+KA IPEI +  I+++YN E S+TWG+TI+E  REV ATYTV VPP TR KVTL AT
Subjt:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT

Query:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP
        KAKCD+ FSYTQRD+L +GR+V T+ DDGLY+ V T+ FDYQNKPLP
Subjt:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP

A0A0A0KEW7 Uncharacterized protein2.1e-5472.79Show/hide
Query:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT
        MAT++A+NGG  EASMA+SLKYVVE SKCWESS+   WG + SVKA +PEI E G+E+N+NEE+S +WG+TIT+ MREVMATYTVNVPPMT+ KVTL AT
Subjt:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT

Query:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP
        KAKCDV FSYTQRDVL DG  VI DCDDGLY+ V+TYNFDY+NKP P
Subjt:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP

A0A1S4E3C5 uncharacterized protein LOC1034989653.9e-3757.82Show/hide
Query:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT
        MAT+ A N    E +MA+SL+Y+ E+SK WESS+  G G   S+KA IP + E  I+++YN E S+ WG+TI+E  +EV +TYTV VPP TR KVTL AT
Subjt:  MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSAT

Query:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP
        KAKCD+ FSYTQRD+L +GR+V  +CDDGLY+ V T+ FDYQNK LP
Subjt:  KAKCDVLFSYTQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCAAGTATGCTAGCAATGGCGGCATGAGCGAGGCATCTATGGCAGTAAGTTTGAAGTACGTAGTTGAAACTTCTAAATGTTGGGAATCTTCAATCATTGCGGG
TTGGGGTGCGATGGTGTCCGTTAAAGCCGAGATTCCTGAAATTGCAGAATTTGGGATTGAACTCAACTATAATGAAGAGAGAAGTCACACTTGGGGACAAACCATTACAG
AGTACATGAGAGAAGTGATGGCAACATATACTGTTAATGTACCACCAATGACAAGGAGGAAAGTGACTCTTAGTGCAACTAAGGCCAAATGCGATGTTCTGTTTTCGTAC
ACGCAGCGAGACGTTCTCGTCGATGGAAGACAAGTTATTACAGACTGTGATGATGGTCTTTACTCTGAAGTTAATACCTACAACTTTGATTACCAGAACAAGCCTCTTCC
ACATGAACACCCATGTGATCATCTTAATGAATCAAACCTTCCTGCCCAACAACCATATTTAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCAAGTATGCTAGCAATGGCGGCATGAGCGAGGCATCTATGGCAGTAAGTTTGAAGTACGTAGTTGAAACTTCTAAATGTTGGGAATCTTCAATCATTGCGGG
TTGGGGTGCGATGGTGTCCGTTAAAGCCGAGATTCCTGAAATTGCAGAATTTGGGATTGAACTCAACTATAATGAAGAGAGAAGTCACACTTGGGGACAAACCATTACAG
AGTACATGAGAGAAGTGATGGCAACATATACTGTTAATGTACCACCAATGACAAGGAGGAAAGTGACTCTTAGTGCAACTAAGGCCAAATGCGATGTTCTGTTTTCGTAC
ACGCAGCGAGACGTTCTCGTCGATGGAAGACAAGTTATTACAGACTGTGATGATGGTCTTTACTCTGAAGTTAATACCTACAACTTTGATTACCAGAACAAGCCTCTTCC
ACATGAACACCCATGTGATCATCTTAATGAATCAAACCTTCCTGCCCAACAACCATATTTAATTTAA
Protein sequenceShow/hide protein sequence
MATKYASNGGMSEASMAVSLKYVVETSKCWESSIIAGWGAMVSVKAEIPEIAEFGIELNYNEERSHTWGQTITEYMREVMATYTVNVPPMTRRKVTLSATKAKCDVLFSY
TQRDVLVDGRQVITDCDDGLYSEVNTYNFDYQNKPLPHEHPCDHLNESNLPAQQPYLI