; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G06570 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G06570
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAgglutinin domain-containing protein
Genome locationChr6:5694315..5694857
RNA-Seq ExpressionCSPI06G06570
SyntenyCSPI06G06570
Gene Ontology termsNA
InterPro domainsIPR008998 - Agglutinin domain
IPR036242 - Agglutinin domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039927.1 uncharacterized protein E6C27_scaffold122G002070 [Cucumis melo var. makuwa]7.3e-9287.64Show/hide
Query:  ELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEPI
        ELP+FIGLQCKNYNNKYLRY+YEDNEAHGL QFSSDTVVSGYAKF+VEKA +G GYVHIRSLYNNKYWVRRSPTE+WITANADEPDENE TWTCTLFEPI
Subjt:  ELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEPI

Query:  RVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE
         VD CNNSG TIRLRHV L H+LCLWRIPPPYEAC+FAAS DHDES LDIFTVFDWDSLFVLPK IA KGDNG YLR+
Subjt:  RVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE

XP_002264858.1 PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera]8.1e-5959.32Show/hide
Query:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP
        M LP ++ L+ K YNNKYLRYI+ED + HG  QFS + VV+ Y+K++VE+A  G G VHIR  YNNKYWVR S   WWI A ADEPDE++ +W+CTLFEP
Subjt:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP

Query:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYL
        + VD       T+R RHVQLGH+ CLWR+PPPY +CLFA ST  D    D+ T+ DW+SL +LPKHIA KGDNG YL
Subjt:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYL

XP_004140685.1 uncharacterized protein LOC101213433 [Cucumis sativus]3.0e-10698.88Show/hide
Query:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP
        MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP
Subjt:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP

Query:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE
        I+VDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLR+
Subjt:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE

XP_008460024.1 PREDICTED: uncharacterized protein LOC103498962 [Cucumis melo]2.5e-9288.2Show/hide
Query:  ELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEPI
        ELP+FIGLQCKNYNNKYLRY+YEDNEAHGL QFSSDTVVSGYAKF+VEKA +G GYVHIRSLYNNKYWVRRSPTE+WITANADEPDENE TWTCTLFEPI
Subjt:  ELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEPI

Query:  RVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE
         VD CNNSGLTIRLRHV L H+LCLWRIPPPYEAC+FAAS DHDES LDIFTVFDWDSLFVLPK IA KGDNG YLR+
Subjt:  RVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE

XP_034690547.1 uncharacterized protein LOC117918132 [Vitis riparia]1.1e-5859.32Show/hide
Query:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP
        M LP ++ L+ K YNN+YLRYI+ED + HG  QFS + VV+ Y+KF+VE+A  G G VHIR  YNNKYWVR S   WWI A ADEPDE++ +W+CTLFEP
Subjt:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP

Query:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYL
        + VD       T+R RHVQLGH+ CLWR+PPPY +CLFA ST  D    D+ T+ DW+SL +LPKHIA KGDNG YL
Subjt:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYL

TrEMBL top hitse value%identityAlignment
A0A0A0KA14 Uncharacterized protein1.5e-10698.88Show/hide
Query:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP
        MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP
Subjt:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP

Query:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE
        I+VDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLR+
Subjt:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE

A0A1S3CB39 uncharacterized protein LOC1034989621.2e-9288.2Show/hide
Query:  ELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEPI
        ELP+FIGLQCKNYNNKYLRY+YEDNEAHGL QFSSDTVVSGYAKF+VEKA +G GYVHIRSLYNNKYWVRRSPTE+WITANADEPDENE TWTCTLFEPI
Subjt:  ELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEPI

Query:  RVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE
         VD CNNSGLTIRLRHV L H+LCLWRIPPPYEAC+FAAS DHDES LDIFTVFDWDSLFVLPK IA KGDNG YLR+
Subjt:  RVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE

A0A438FWC7 Uncharacterized protein1.9e-5858.76Show/hide
Query:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP
        M LP ++ L+ K YN KYLRYI+ED + HG  QFS + VV+ Y+K++VE+A  G G VHIR  YNNKYWVR S   WWI A ADEPDE++ +W+CTLFEP
Subjt:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP

Query:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYL
        + VD       T+R RHVQLGH+ CLWR+PPPY +CLFA ST  D    D+ T+ DW+SL +LPKHIA KGDNG YL
Subjt:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYL

A0A5D3DLV2 Uncharacterized protein3.5e-9287.64Show/hide
Query:  ELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEPI
        ELP+FIGLQCKNYNNKYLRY+YEDNEAHGL QFSSDTVVSGYAKF+VEKA +G GYVHIRSLYNNKYWVRRSPTE+WITANADEPDENE TWTCTLFEPI
Subjt:  ELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEPI

Query:  RVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE
         VD CNNSG TIRLRHV L H+LCLWRIPPPYEAC+FAAS DHDES LDIFTVFDWDSLFVLPK IA KGDNG YLR+
Subjt:  RVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLRE

F6HZZ6 Uncharacterized protein3.9e-5959.32Show/hide
Query:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP
        M LP ++ L+ K YNNKYLRYI+ED + HG  QFS + VV+ Y+K++VE+A  G G VHIR  YNNKYWVR S   WWI A ADEPDE++ +W+CTLFEP
Subjt:  MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEP

Query:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYL
        + VD       T+R RHVQLGH+ CLWR+PPPY +CLFA ST  D    D+ T+ DW+SL +LPKHIA KGDNG YL
Subjt:  IRVDSCNNSGLTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTACCAGAGTTCATTGGGTTGCAATGCAAAAACTATAACAACAAATACTTGCGCTACATCTATGAAGACAATGAGGCACATGGTTTGCATCAATTCTCCAGCGA
CACCGTGGTGAGCGGCTATGCAAAATTCAAGGTGGAAAAGGCAAATATTGGGAACGGATACGTTCATATCCGATCCCTCTACAACAACAAATATTGGGTTCGTCGATCTC
CAACTGAATGGTGGATCACTGCCAATGCCGACGAGCCAGATGAGAATGAATGCACATGGACATGCACATTATTCGAACCTATTCGAGTAGATAGCTGCAACAACAGTGGT
CTTACAATTCGCCTCCGCCACGTTCAACTCGGCCACTTTTTATGTCTTTGGCGGATCCCCCCACCCTACGAGGCTTGCTTGTTTGCAGCGTCTACAGATCATGACGAATC
GCACTTAGACATCTTTACAGTCTTTGATTGGGATTCTCTCTTCGTTTTACCCAAACACATTGCTATCAAAGGTGACAATGGCTGCTACCTTAGGGAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACTACCAGAGTTCATTGGGTTGCAATGCAAAAACTATAACAACAAATACTTGCGCTACATCTATGAAGACAATGAGGCACATGGTTTGCATCAATTCTCCAGCGA
CACCGTGGTGAGCGGCTATGCAAAATTCAAGGTGGAAAAGGCAAATATTGGGAACGGATACGTTCATATCCGATCCCTCTACAACAACAAATATTGGGTTCGTCGATCTC
CAACTGAATGGTGGATCACTGCCAATGCCGACGAGCCAGATGAGAATGAATGCACATGGACATGCACATTATTCGAACCTATTCGAGTAGATAGCTGCAACAACAGTGGT
CTTACAATTCGCCTCCGCCACGTTCAACTCGGCCACTTTTTATGTCTTTGGCGGATCCCCCCACCCTACGAGGCTTGCTTGTTTGCAGCGTCTACAGATCATGACGAATC
GCACTTAGACATCTTTACAGTCTTTGATTGGGATTCTCTCTTCGTTTTACCCAAACACATTGCTATCAAAGGTGACAATGGCTGCTACCTTAGGGAAAAATAG
Protein sequenceShow/hide protein sequence
MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHIRSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEPIRVDSCNNSG
LTIRLRHVQLGHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFDWDSLFVLPKHIAIKGDNGCYLREK