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CSPI06G06590 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G06590
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAgglutinin domain-containing protein
Genome locationChr6:5695779..5696217
RNA-Seq ExpressionCSPI06G06590
SyntenyCSPI06G06590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039927.1 uncharacterized protein E6C27_scaffold122G002070 [Cucumis melo var. makuwa]1.5e-4485.59Show/hide
Query:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKI-SLNMEDGIY
        VSVKL+VET VI+SS+PIIFEETLAIGPE FSGEYDWGED NLTKKV+TVHKVLVQPCS VRVNLVATQASYDVPFSYTQNDTLIS   I +  MEDGIY
Subjt:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKI-SLNMEDGIY

Query:  KGVNLYNFKFE
        KGVN+YNFKFE
Subjt:  KGVNLYNFKFE

KAA8521726.1 hypothetical protein F0562_012399 [Nyssa sinensis]1.2e-2250.89Show/hide
Query:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK
        VS+KL + TS I++ VP+I E  + IG E F+GEY WG+    + +V+TV+ V V P S V+V+L+AT+ S DVPFSY+Q DTLI+G++I+  M+DG+Y 
Subjt:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK

Query:  GVNLYNFKFETE
        G+N +NFK+ET+
Subjt:  GVNLYNFKFETE

XP_004140685.1 uncharacterized protein LOC101213433 [Cucumis sativus]5.4e-5599.11Show/hide
Query:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK
        VS KLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK
Subjt:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK

Query:  GVNLYNFKFETE
        GVNLYNFKFETE
Subjt:  GVNLYNFKFETE

XP_008460024.1 PREDICTED: uncharacterized protein LOC103498962 [Cucumis melo]8.7e-4586.49Show/hide
Query:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKI-SLNMEDGIY
        VSVKL+VET VI+SS+PIIFEETLAIGPE FSGEYDWGED NLTKKV+TVHKVLVQPCS VRVNLVATQASYDVPFSYTQNDTLIS   I +  MEDGIY
Subjt:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKI-SLNMEDGIY

Query:  KGVNLYNFKFE
        KGVNLYNFKFE
Subjt:  KGVNLYNFKFE

XP_022953936.1 uncharacterized protein LOC111456344 [Cucurbita moschata]2.1e-2251.79Show/hide
Query:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK
        VS+KL V+T+ I++ +P IFE  + I  E FSG+Y WGE    +K V+T ++V V P + V V+L+AT+ + DVP+SYTQ DTLI+GE  +  M+DG+YK
Subjt:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK

Query:  GVNLYNFKFETE
        GVN YNFK+ET+
Subjt:  GVNLYNFKFETE

TrEMBL top hitse value%identityAlignment
A0A0A0KA14 Uncharacterized protein2.6e-5599.11Show/hide
Query:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK
        VS KLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK
Subjt:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK

Query:  GVNLYNFKFETE
        GVNLYNFKFETE
Subjt:  GVNLYNFKFETE

A0A1S3CB39 uncharacterized protein LOC1034989624.2e-4586.49Show/hide
Query:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKI-SLNMEDGIY
        VSVKL+VET VI+SS+PIIFEETLAIGPE FSGEYDWGED NLTKKV+TVHKVLVQPCS VRVNLVATQASYDVPFSYTQNDTLIS   I +  MEDGIY
Subjt:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKI-SLNMEDGIY

Query:  KGVNLYNFKFE
        KGVNLYNFKFE
Subjt:  KGVNLYNFKFE

A0A5D3DLV2 Uncharacterized protein7.2e-4585.59Show/hide
Query:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKI-SLNMEDGIY
        VSVKL+VET VI+SS+PIIFEETLAIGPE FSGEYDWGED NLTKKV+TVHKVLVQPCS VRVNLVATQASYDVPFSYTQNDTLIS   I +  MEDGIY
Subjt:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKI-SLNMEDGIY

Query:  KGVNLYNFKFE
        KGVN+YNFKFE
Subjt:  KGVNLYNFKFE

A0A5J4ZVE8 Uncharacterized protein5.9e-2350.89Show/hide
Query:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK
        VS+KL + TS I++ VP+I E  + IG E F+GEY WG+    + +V+TV+ V V P S V+V+L+AT+ S DVPFSY+Q DTLI+G++I+  M+DG+Y 
Subjt:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK

Query:  GVNLYNFKFETE
        G+N +NFK+ET+
Subjt:  GVNLYNFKFETE

A0A6J1GPH4 uncharacterized protein LOC1114563441.0e-2251.79Show/hide
Query:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK
        VS+KL V+T+ I++ +P IFE  + I  E FSG+Y WGE    +K V+T ++V V P + V V+L+AT+ + DVP+SYTQ DTLI+GE  +  M+DG+YK
Subjt:  VSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTLISGEKISLNMEDGIYK

Query:  GVNLYNFKFETE
        GVN YNFK+ET+
Subjt:  GVNLYNFKFETE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTTGGTTCGACGGTGGTGAAGGACAAAACAACCCGCTGTGATAGATGTGAAACTTTCATACAACGACACGAGGTTTCGGTGAAGCTCGACGTGGAAACAAGCGT
CATCAAATCGAGCGTTCCCATCATTTTTGAAGAGACTCTGGCGATTGGACCTGAGTTGTTTTCAGGAGAATATGATTGGGGAGAAGATACGAACTTGACAAAGAAGGTGG
ATACTGTGCACAAGGTTTTGGTGCAGCCATGCTCGAATGTTAGAGTGAATTTGGTGGCAACACAAGCTTCATATGATGTGCCATTCTCTTACACACAGAATGATACTCTC
ATTAGTGGCGAAAAGATTTCACTCAACATGGAAGATGGGATTTACAAGGGAGTTAATCTTTACAACTTTAAGTTTGAAACTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATATTTGGTTCGACGGTGGTGAAGGACAAAACAACCCGCTGTGATAGATGTGAAACTTTCATACAACGACACGAGGTTTCGGTGAAGCTCGACGTGGAAACAAGCGT
CATCAAATCGAGCGTTCCCATCATTTTTGAAGAGACTCTGGCGATTGGACCTGAGTTGTTTTCAGGAGAATATGATTGGGGAGAAGATACGAACTTGACAAAGAAGGTGG
ATACTGTGCACAAGGTTTTGGTGCAGCCATGCTCGAATGTTAGAGTGAATTTGGTGGCAACACAAGCTTCATATGATGTGCCATTCTCTTACACACAGAATGATACTCTC
ATTAGTGGCGAAAAGATTTCACTCAACATGGAAGATGGGATTTACAAGGGAGTTAATCTTTACAACTTTAAGTTTGAAACTGAATGA
Protein sequenceShow/hide protein sequence
MIFGSTVVKDKTTRCDRCETFIQRHEVSVKLDVETSVIKSSVPIIFEETLAIGPELFSGEYDWGEDTNLTKKVDTVHKVLVQPCSNVRVNLVATQASYDVPFSYTQNDTL
ISGEKISLNMEDGIYKGVNLYNFKFETE