CuGenDBv2

Gene ID	CSPI06G06980
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Vacuolar sorting-associated protein 62
Genome location	Chr6:6029633..6032831
RNA-Seq Expression	CSPI06G06980
Synteny	CSPI06G06980
Gene Ontology terms	NA
InterPro domains	IPR014807 - Cytochrome c oxidase assembly factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039892.1 Vacuolar sorting-associated protein 62 [Cucumis melo var. makuwa]

3.2e-98

95.24

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Query:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH
        MLAKRFASIFKRSSTP+ASSNSIKP+ENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAI+K RNNQAV DAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQG GILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINL+EKFAPAACVSCT CQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR

XP_004140577.1 uncharacterized protein LOC101206927 [Cucumis sativus]

2.5e-103

99.47

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Query:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH
        MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAI+KVRNNQAVIDAIGEPIDKGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR

XP_008459968.1 PREDICTED: uncharacterized protein LOC103498925 isoform X1 [Cucumis melo]

3.2e-98

95.24

Show/hide

Query:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH
        MLAKRFASIFKRSSTP+ASSNSIKP+ENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAI+K RNNQAV DAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQG GILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINL+EKFAPAACVSCT CQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR

XP_038876218.1 uncharacterized protein LOC120068500 isoform X1 [Benincasa hispida]

9.6e-95

91.53

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Query:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH
        MLAKRF SIFKRS  PHASS+SIKP+E+ VNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAI+K RNNQAVIDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDIL+MDALL+VP NEGKQKT+RINL+EKFAPAACVSCTDCQPPETE R
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR

XP_038876219.1 uncharacterized protein LOC120068500 isoform X2 [Benincasa hispida]

3.1e-93

91.53

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Query:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH
        MLAKRF SIFKRS  PHASS SIKP+E+ VNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAI+K RNNQAVIDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDIL+MDALL+VP NEGKQKT+RINL+EKFAPAACVSCTDCQPPETE R
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KF26 Uncharacterized protein

1.2e-103

99.47

Show/hide

Query:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH
        MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAI+KVRNNQAVIDAIGEPIDKGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR

A0A1S3CBF0 uncharacterized protein LOC103498925 isoform X1

1.5e-98

95.24

Show/hide

Query:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH
        MLAKRFASIFKRSSTP+ASSNSIKP+ENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAI+K RNNQAV DAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQG GILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINL+EKFAPAACVSCT CQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR

A0A5D3DMW4 Vacuolar sorting-associated protein 62

1.5e-98

95.24

Show/hide

Query:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH
        MLAKRFASIFKRSSTP+ASSNSIKP+ENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAI+K RNNQAV DAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQG GILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINL+EKFAPAACVSCT CQPPETEKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR

A0A6J1GQN1 uncharacterized protein LOC111456591 isoform X1

1.5e-88

84.29

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Query:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH
        MLAKR  SIFKRS TP+ASS+S++P+E  VNKSWGR AVSFVL+TVTGGVALSALDDLAIYHSCSSKAI+K +NN+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAP--AACVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGI+QLKAVRNGE+SWISFLRPRDWDIL+MDALL+VPENEGKQ+T+RINL+EKFAP  AACV+CTDCQ PE EKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAP--AACVSCTDCQPPETEKR

A0A6J1JQM9 uncharacterized protein LOC111488050 isoform X1

7.7e-90

85.86

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Query:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH
        MLAKRF SIFKRS TP+ASS+S++P+E  VNKSWGRKAVSFVL+TVTGGVALSALDDLAIYHSCSSKAI+K +NN+A+IDAIGEPI KGPWYNASLAVAH
Subjt:  MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAH

Query:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAA--CVSCTDCQPPETEKR
        KRHSLSCTFPVSGPQGTGI+QLKAVRNGEDSWISFLRPRDWDIL+MDALL+VPENEGKQ+TLRINL+EKFAPAA  CV+CTDCQ P  EKR
Subjt:  KRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAA--CVSCTDCQPPETEKR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G20390.1 unknown protein

1.5e-61

62.63

Show/hide

Query:  MLAKRFASIFKRSST--PHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAV
        M A+RF S FK SST  P  ++ ++         S+GRKAVSFVLITVTGGVALSALDDL+IY  CSSKA++KV N++ +I+AIGEPI+KGPWYNASLAV
Subjt:  MLAKRFASIFKRSST--PHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAV

Query:  AHKRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEK
        +H+RHS+SC+FPV GPQGTGIL LKAVRNGEDS   FL+ RDWDIL+MDAL++VP NEG Q+TLRIN+++   P+        +P E EK
Subjt:  AHKRHSLSCTFPVSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEK

AT2G20390.2 unknown protein

4.2e-56

52.65

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Query:  MLAKRFASIFKRSST--PHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAV
        M A+RF S FK SST  P  ++ ++         S+GRKAVSFVLITVTGGVALSALDDL+IY  CSSKA++KV N++ +I+AIGEPI+KGPWYNASLAV
Subjt:  MLAKRFASIFKRSST--PHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAV

Query:  AHKRHSLSCTFPVSGPQGTGILQLKAVRNG------------------------------------EDSWISFLRPRDWDILMMDALLYVPENEGKQKTL
        +H+RHS+SC+FPV GPQGTGIL LKAVRNG                                    EDS   FL+ RDWDIL+MDAL++VP NEG Q+TL
Subjt:  AHKRHSLSCTFPVSGPQGTGILQLKAVRNG------------------------------------EDSWISFLRPRDWDILMMDALLYVPENEGKQKTL

Query:  RINLSEKFAPAACVSCTDCQPPETEK
        RIN+++   P+        +P E EK
Subjt:  RINLSEKFAPAACVSCTDCQPPETEK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTGGCGAAAAGGTTCGCTTCTATATTCAAGCGCTCTTCTACTCCACATGCTTCCAGCAATTCGATAAAGCCAACGGAGAATGAGGTGAATAAATCCTGGGGTCGGAA
AGCCGTCTCCTTTGTGCTTATTACTGTTACTGGTGGTGTAGCTTTGAGTGCTTTAGATGACCTTGCCATTTATCATAGCTGTAGCAGCAAAGCTATAAAGAAAGTCAGAA
ACAATCAAGCAGTCATAGATGCTATTGGTGAACCCATTGATAAAGGTCCATGGTACAATGCATCACTTGCAGTAGCTCACAAGAGACACTCTCTATCCTGCACATTTCCA
GTATCAGGACCACAAGGCACAGGGATCCTCCAACTGAAGGCAGTTCGTAATGGAGAGGATTCCTGGATTTCTTTTCTCCGGCCTCGGGACTGGGACATTCTGATGATGGA
TGCTCTCCTTTATGTTCCTGAAAACGAAGGTAAGCAGAAAACTTTGCGTATTAATCTCAGCGAGAAGTTTGCTCCTGCTGCTTGTGTCTCATGCACCGACTGTCAGCCTC
CAGAGACAGAGAAGAGATGA

mRNA sequence

Show/hide mRNA sequence

CTCACGCATTGGTCTCGATGTATTAAGCAAAACATATATATACACACACACATATCTATATATATAAACCTAGATCAAATTTCGAGTGGGCTGGCTATACACATTTATGA
AATTAAAGGCAAACTCCTAACGATTGAGGAAGGAGCAAGGTAGTCCAAAGTTGAAAATGTTGGCGAAAAGGTTCGCTTCTATATTCAAGCGCTCTTCTACTCCACATGCT
TCCAGCAATTCGATAAAGCCAACGGAGAATGAGGTGAATAAATCCTGGGGTCGGAAAGCCGTCTCCTTTGTGCTTATTACTGTTACTGGTGGTGTAGCTTTGAGTGCTTT
AGATGACCTTGCCATTTATCATAGCTGTAGCAGCAAAGCTATAAAGAAAGTCAGAAACAATCAAGCAGTCATAGATGCTATTGGTGAACCCATTGATAAAGGTCCATGGT
ACAATGCATCACTTGCAGTAGCTCACAAGAGACACTCTCTATCCTGCACATTTCCAGTATCAGGACCACAAGGCACAGGGATCCTCCAACTGAAGGCAGTTCGTAATGGA
GAGGATTCCTGGATTTCTTTTCTCCGGCCTCGGGACTGGGACATTCTGATGATGGATGCTCTCCTTTATGTTCCTGAAAACGAAGGTAAGCAGAAAACTTTGCGTATTAA
TCTCAGCGAGAAGTTTGCTCCTGCTGCTTGTGTCTCATGCACCGACTGTCAGCCTCCAGAGACAGAGAAGAGATGAAGTTAGCTTTTTATGGATATTATGAAACTATTGT
CATAATATCCTTTGTGAAGTTGCTTTCTATTAGTTTTCTGTCCTGACATGATTTTGAGCTAACCGAAGGGTCGAAGTATTCGTTATCCCCACCAAAATAATAATTTTCTT
TGAGGTTGAGTTCAAACCGCGGTAGAAGATTTGTTATTATACAACCTTGCTGACATTAAATGTGGCAAAGTTATTATGGTTATACCGTAAAATCCAATTTGTAAAAGAAA
AACAGTAACTATTCATCTGATTTTTTTGTTCTTA

Protein sequence

Show/hide protein sequence

MLAKRFASIFKRSSTPHASSNSIKPTENEVNKSWGRKAVSFVLITVTGGVALSALDDLAIYHSCSSKAIKKVRNNQAVIDAIGEPIDKGPWYNASLAVAHKRHSLSCTFP
VSGPQGTGILQLKAVRNGEDSWISFLRPRDWDILMMDALLYVPENEGKQKTLRINLSEKFAPAACVSCTDCQPPETEKR

CSPI06G06980 (gene) of Cucumber (PI 183967) v1 genome