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CSPI06G07270 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G07270
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPlant protein of unknown function (DUF247)
Genome locationChr6:6193015..6193380
RNA-Seq ExpressionCSPI06G07270
SyntenyCSPI06G07270
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039868.1 UPF0481 protein [Cucumis melo var. makuwa]4.4e-3266.12Show/hide
Query:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKN-NLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ
        M+EVEEE T LP+Y  ++HKDQ PM+K DVVI VK+   E  +  LV V+EF S  +TIKPSIYKIPKFMKDIQP AY+P LV FGPYHHG + L  ME+
Subjt:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKN-NLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ

Query:  EKLKVFRHLVKGD--AATYES
        EK KVF+HLVKGD  AATYES
Subjt:  EKLKVFRHLVKGD--AATYES

KGN46402.1 hypothetical protein Csa_004940 [Cucumis sativus]2.6e-61100Show/hide
Query:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQE
        MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQE
Subjt:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQE

Query:  KLKVFRHLVKGDAATYESDFE
        KLKVFRHLVKGDAATYESDFE
Subjt:  KLKVFRHLVKGDAATYESDFE

XP_016902479.1 PREDICTED: uncharacterized protein LOC103499077 [Cucumis melo]3.7e-3166.94Show/hide
Query:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTEL-VLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ
        MVEVEEE+T LP+   N+HKDQ PM+K DVVI VK+ L++ L +  V V+E  SS KTIKPSIYKIPKFMKDIQ  AY+P LV FGPYHHG + L  ME+
Subjt:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTEL-VLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ

Query:  EKLKVFRHLVKGD--AATYES
        EK KVF+HLVKGD  AATYES
Subjt:  EKLKVFRHLVKGD--AATYES

XP_031742583.1 UPF0481 protein At3g47200 [Cucumis sativus]1.3e-3161.34Show/hide
Query:  MVEVEEEQTLLPMY-RRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ
        M E EE Q LLP+Y R  +HKDQLP+    VV++VK+NL+K L + V V++ GSSGKTIKPSIYKIP F+KD+   AY P +V FGPYHHG+K+L  MEQ
Subjt:  MVEVEEEQTLLPMY-RRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ

Query:  EKLKVFRHLVKGDAATYES
        EKLKVFRHLV      YES
Subjt:  EKLKVFRHLVKGDAATYES

XP_031742694.1 UPF0481 protein At3g47200-like [Cucumis sativus]1.3e-3161.34Show/hide
Query:  MVEVEEEQTLLPMY-RRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ
        M E EE Q LLP+Y R  +HKDQLP+    VV++VK+NL+K L + V V++ GSSGKTIKPSIYKIP F+KD+   AY P +V FGPYHHG+K+L  MEQ
Subjt:  MVEVEEEQTLLPMY-RRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ

Query:  EKLKVFRHLVKGDAATYES
        EKLKVFRHLV      YES
Subjt:  EKLKVFRHLVKGDAATYES

TrEMBL top hitse value%identityAlignment
A0A0A0K9F5 Uncharacterized protein6.1e-3261.34Show/hide
Query:  MVEVEEEQTLLPMY-RRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ
        M E EE Q LLP+Y R  +HKDQLP+    VV++VK+NL+K L + V V++ GSSGKTIKPSIYKIP F+KD+   AY P +V FGPYHHG+K+L  MEQ
Subjt:  MVEVEEEQTLLPMY-RRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ

Query:  EKLKVFRHLVKGDAATYES
        EKLKVFRHLV      YES
Subjt:  EKLKVFRHLVKGDAATYES

A0A0A0KDE1 Uncharacterized protein1.3e-61100Show/hide
Query:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQE
        MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQE
Subjt:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQE

Query:  KLKVFRHLVKGDAATYESDFE
        KLKVFRHLVKGDAATYESDFE
Subjt:  KLKVFRHLVKGDAATYESDFE

A0A1S4E2L7 uncharacterized protein LOC1034990771.8e-3166.94Show/hide
Query:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTEL-VLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ
        MVEVEEE+T LP+   N+HKDQ PM+K DVVI VK+ L++ L +  V V+E  SS KTIKPSIYKIPKFMKDIQ  AY+P LV FGPYHHG + L  ME+
Subjt:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTEL-VLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ

Query:  EKLKVFRHLVKGD--AATYES
        EK KVF+HLVKGD  AATYES
Subjt:  EKLKVFRHLVKGD--AATYES

A0A5A7TA99 UPF0481 protein2.1e-3266.12Show/hide
Query:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKN-NLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ
        M+EVEEE T LP+Y  ++HKDQ PM+K DVVI VK+   E  +  LV V+EF S  +TIKPSIYKIPKFMKDIQP AY+P LV FGPYHHG + L  ME+
Subjt:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKN-NLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ

Query:  EKLKVFRHLVKGD--AATYES
        EK KVF+HLVKGD  AATYES
Subjt:  EKLKVFRHLVKGD--AATYES

E5GB49 Uncharacterized protein1.8e-3166.94Show/hide
Query:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTEL-VLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ
        MVEVEEE+T LP+   N+HKDQ PM+K DVVI VK+ L++ L +  V V+E  SS KTIKPSIYKIPKFMKDIQ  AY+P LV FGPYHHG + L  ME+
Subjt:  MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTEL-VLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQ

Query:  EKLKVFRHLVKGD--AATYES
        EK KVF+HLVKGD  AATYES
Subjt:  EKLKVFRHLVKGD--AATYES

SwissProt top hitse value%identityAlignment
Q9SD53 UPF0481 protein At3g472001.8e-0436.11Show/hide
Query:  KNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFR
        +N L     E VL+ E  S+GK     I+++P+    + P AYKP++V  GPYH+G+K L  ++Q K ++ +
Subjt:  KNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFR

Arabidopsis top hitse value%identityAlignment
AT3G47210.1 Plant protein of unknown function (DUF247)1.0e-0748.94Show/hide
Query:  IYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHL
        I+++PK   ++ P AYKP++V  GPYHHG K L  ++Q KL+ F HL
Subjt:  IYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHL

AT3G47250.1 Plant protein of unknown function (DUF247)7.2e-0931.58Show/hide
Query:  VEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEK
        + + +E  L P+ +R+E         + VV  +K NL+     L+L++   S+GK     I++IP  + ++ P AYKP++V  GPYH+G+  L  ++Q K
Subjt:  VEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEK

Query:  LKVFRHLVKGDAAT
         +     V  D AT
Subjt:  LKVFRHLVKGDAAT

AT3G47250.2 Plant protein of unknown function (DUF247)7.2e-0931.58Show/hide
Query:  VEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEK
        + + +E  L P+ +R+E         + VV  +K NL+     L+L++   S+GK     I++IP  + ++ P AYKP++V  GPYH+G+  L  ++Q K
Subjt:  VEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEK

Query:  LKVFRHLVKGDAAT
         +     V  D AT
Subjt:  LKVFRHLVKGDAAT

AT3G47250.3 Plant protein of unknown function (DUF247)7.2e-0931.58Show/hide
Query:  VEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEK
        + + +E  L P+ +R+E         + VV  +K NL+     L+L++   S+GK     I++IP  + ++ P AYKP++V  GPYH+G+  L  ++Q K
Subjt:  VEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEK

Query:  LKVFRHLVKGDAAT
         +     V  D AT
Subjt:  LKVFRHLVKGDAAT

AT3G50160.1 Plant protein of unknown function (DUF247)6.7e-0731.65Show/hide
Query:  VIQVKNNLEKQLTELVLV---DEFGSSGKTIKPS-----IYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEK
        V+ +++  E++L E+ ++   D+  + G     S     IY++P ++++    +Y PQ+V  GPYHHG K L+ ME+ K
Subjt:  VIQVKNNLEKQLTELVLV---DEFGSSGKTIKPS-----IYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGGTGGAAGAGGAGCAGACGCTGCTGCCCATGTATCGCAGAAATGAACATAAAGATCAATTACCAATGAACAAGAAAGATGTGGTAATTCAAGTCAAGAACAA
TCTGGAGAAACAGTTGACGGAATTAGTACTGGTGGACGAGTTCGGATCATCAGGAAAAACCATCAAACCTTCCATTTACAAAATTCCAAAGTTCATGAAAGATATCCAAC
CGAATGCGTACAAGCCACAGTTGGTGTTGTTTGGGCCATACCATCATGGGGACAAAGATTTGGTTACAATGGAACAGGAAAAACTGAAAGTGTTTCGGCATCTGGTAAAA
GGTGATGCTGCCACTTACGAGTCAGATTTTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGGTGGAAGAGGAGCAGACGCTGCTGCCCATGTATCGCAGAAATGAACATAAAGATCAATTACCAATGAACAAGAAAGATGTGGTAATTCAAGTCAAGAACAA
TCTGGAGAAACAGTTGACGGAATTAGTACTGGTGGACGAGTTCGGATCATCAGGAAAAACCATCAAACCTTCCATTTACAAAATTCCAAAGTTCATGAAAGATATCCAAC
CGAATGCGTACAAGCCACAGTTGGTGTTGTTTGGGCCATACCATCATGGGGACAAAGATTTGGTTACAATGGAACAGGAAAAACTGAAAGTGTTTCGGCATCTGGTAAAA
GGTGATGCTGCCACTTACGAGTCAGATTTTGAGTAA
Protein sequenceShow/hide protein sequence
MVEVEEEQTLLPMYRRNEHKDQLPMNKKDVVIQVKNNLEKQLTELVLVDEFGSSGKTIKPSIYKIPKFMKDIQPNAYKPQLVLFGPYHHGDKDLVTMEQEKLKVFRHLVK
GDAATYESDFE