; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G07670 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G07670
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDUF4408 domain-containing protein
Genome locationChr6:6487153..6487725
RNA-Seq ExpressionCSPI06G07670
SyntenyCSPI06G07670
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant
IPR025520 - Domain of unknown function DUF4408


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039829.1 DUF4408 domain-containing protein [Cucumis melo var. makuwa]7.2e-8287.5Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSL-IFFFFTYWL-SSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMN
        MDVINAEKLFAIKYCYKKSQLFLYNLN+F SL I FFFTYWL SSQSHYFPPDTISSIIK+V TPPSFFSPSCLFVIVNFIVVYIVGEQKLT AKSA MN
Subjt:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSL-IFFFFTYWL-SSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMN

Query:  TMYDEYYIERTLEMK-YLNPCENMKELVVEKFVEAKEEEGISPIEDDNGIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEAVDCFS
         MYDEYYIERT+EMK YLNPCENMK+L VEK VE KEEEGI  I+DDNG+ F +KENEGDCK ANEELNKRAEAFIARVNKQRKLEAVDCFS
Subjt:  TMYDEYYIERTLEMK-YLNPCENMKELVVEKFVEAKEEEGISPIEDDNGIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEAVDCFS

KAE8646757.1 hypothetical protein Csa_004884 [Cucumis sativus]6.7e-9698.92Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFFTYWLSSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMNTM
        MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIF FFTYWLSSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMNTM
Subjt:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFFTYWLSSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMNTM

Query:  YDEYYIERTLEMKYLNPCENMKELVVEKFVEAKEEEGISPIEDDNGIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEAVD
        YDEYYIERTLEMKYLNPCENMKELVVEKFVE KEEEGISPIEDDNGIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEAVD
Subjt:  YDEYYIERTLEMKYLNPCENMKELVVEKFVEAKEEEGISPIEDDNGIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEAVD

PQQ10153.1 zinc finger E-box-binding homeobox 1 [Prunus yedoensis var. nudiflora]1.5e-1536.13Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFF----TYWLSSQSHYFPPDTISSIIKMVATPPS---FFSPSCLFVIVNFIVVYIVGEQKLTGAK
        MD IN +KL A+K  YKK      N  IF+SLI           L S SH+FP    +  +  ++ P S   FF+P CLF++VNFIVV+++GE +L+G +
Subjt:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFF----TYWLSSQSHYFPPDTISSIIKMVATPPS---FFSPSCLFVIVNFIVVYIVGEQKLTGAK

Query:  SAFMNTMYDEYYIERT----------LEMK-------YLNPCENMKELVVEKFVEAKEEEGISPIEDDN-----GIGFSEKENEGDCK------------
        S+  N MY+E Y+ERT          LE K        L+  E+  +++ EK V+  +E+     +D++     G    EKE E + K            
Subjt:  SAFMNTMYDEYYIERT----------LEMK-------YLNPCENMKELVVEKFVEAKEEEGISPIEDDN-----GIGFSEKENEGDCK------------

Query:  -------------LANEELNKRAEAFIARVNKQRKLEA
                     +  EELNKR EAFIARVNKQR LEA
Subjt:  -------------LANEELNKRAEAFIARVNKQRKLEA

XP_007221609.1 zinc finger E-box-binding homeobox 1 [Prunus persica]6.8e-1636.68Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFF----TYWLSSQSHYFPPDTISSIIKMVATPPS---FFSPSCLFVIVNFIVVYIVGEQKLTGAK
        MD I  EKL A+K  YKK      N  IF+SLI           L S SH+FP    +  +  ++ P S   FF+P CLF++VNFIVV+++GE +L+G +
Subjt:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFF----TYWLSSQSHYFPPDTISSIIKMVATPPS---FFSPSCLFVIVNFIVVYIVGEQKLTGAK

Query:  SAFMNTMYDEYYIERT-----------------LEMKYLNPCENMKELVVEKFVEAKEEEGISPIEDDN-----GIGFSEKENEGDCK------------
        S+  N MY+E Y+ERT                  E+  L+  E+  +++ EK V+  +E+     +D++     G    EKE E + K            
Subjt:  SAFMNTMYDEYYIERT-----------------LEMKYLNPCENMKELVVEKFVEAKEEEGISPIEDDN-----GIGFSEKENEGDCK------------

Query:  ----LANEELNKRAEAFIARVNKQRKLEA
            +  EELNKR EAFIARVNKQR LEA
Subjt:  ----LANEELNKRAEAFIARVNKQRKLEA

XP_038875115.1 uncharacterized protein LOC120067646 [Benincasa hispida]1.7e-6775.52Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFFTYWLSSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAK-SAFMNT
        MDVI+AEKLFAIKYCYKKSQLFLYNLN+FHSLI FFFT+WLSSQ   FPPD +SS+I MV  PPSFFSPSC FVIVNFIV+YIVGEQKL GA+ S+ MN 
Subjt:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFFTYWLSSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAK-SAFMNT

Query:  MYDEYYIERTLEMKYLNPCENMKELVVEKFVEAKEEEGISPIEDDN-GIGFSEK-ENEGDCKLANEELNKRAEAFIARVNKQRKLEAVDCFS
        MYDEYYI +T+EM  +N CENMK+L VEK VE KEEE +  +E DN G+  SEK E EGDC+LANEELNKRAEAFIARVNKQRKLEAVDC +
Subjt:  MYDEYYIERTLEMKYLNPCENMKELVVEKFVEAKEEEGISPIEDDN-GIGFSEK-ENEGDCKLANEELNKRAEAFIARVNKQRKLEAVDCFS

TrEMBL top hitse value%identityAlignment
A0A0A0K9L0 DUF4408 domain-containing protein1.8e-9998.95Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFFTYWLSSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMNTM
        MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIF FFTYWLSSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMNTM
Subjt:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFFTYWLSSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMNTM

Query:  YDEYYIERTLEMKYLNPCENMKELVVEKFVEAKEEEGISPIEDDNGIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEAVDCFSC
        YDEYYIERTLEMKYLNPCENMKELVVEKFVE KEEEGISPIEDDNGIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEAVDCFSC
Subjt:  YDEYYIERTLEMKYLNPCENMKELVVEKFVEAKEEEGISPIEDDNGIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEAVDCFSC

A0A314YTX2 Zinc finger E-box-binding homeobox 17.4e-1636.13Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFF----TYWLSSQSHYFPPDTISSIIKMVATPPS---FFSPSCLFVIVNFIVVYIVGEQKLTGAK
        MD IN +KL A+K  YKK      N  IF+SLI           L S SH+FP    +  +  ++ P S   FF+P CLF++VNFIVV+++GE +L+G +
Subjt:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFF----TYWLSSQSHYFPPDTISSIIKMVATPPS---FFSPSCLFVIVNFIVVYIVGEQKLTGAK

Query:  SAFMNTMYDEYYIERT----------LEMK-------YLNPCENMKELVVEKFVEAKEEEGISPIEDDN-----GIGFSEKENEGDCK------------
        S+  N MY+E Y+ERT          LE K        L+  E+  +++ EK V+  +E+     +D++     G    EKE E + K            
Subjt:  SAFMNTMYDEYYIERT----------LEMK-------YLNPCENMKELVVEKFVEAKEEEGISPIEDDN-----GIGFSEKENEGDCK------------

Query:  -------------LANEELNKRAEAFIARVNKQRKLEA
                     +  EELNKR EAFIARVNKQR LEA
Subjt:  -------------LANEELNKRAEAFIARVNKQRKLEA

A0A5D3DN17 DUF4408 domain-containing protein3.5e-8287.5Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSL-IFFFFTYWL-SSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMN
        MDVINAEKLFAIKYCYKKSQLFLYNLN+F SL I FFFTYWL SSQSHYFPPDTISSIIK+V TPPSFFSPSCLFVIVNFIVVYIVGEQKLT AKSA MN
Subjt:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSL-IFFFFTYWL-SSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMN

Query:  TMYDEYYIERTLEMK-YLNPCENMKELVVEKFVEAKEEEGISPIEDDNGIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEAVDCFS
         MYDEYYIERT+EMK YLNPCENMK+L VEK VE KEEEGI  I+DDNG+ F +KENEGDCK ANEELNKRAEAFIARVNKQRKLEAVDCFS
Subjt:  TMYDEYYIERTLEMK-YLNPCENMKELVVEKFVEAKEEEGISPIEDDNGIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEAVDCFS

A0A5E4EWE0 PREDICTED: L484_0101337.4e-1636.4Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFF----TYWLSSQSHYFPPDTISSIIKMVATPPS---FFSPSCLFVIVNFIVVYIVGEQKLTGAK
        MD I  EKL A+K  YKK      N  IF+SLI           L S SH+FP    +  +  ++ P S   FF+P CLF++VNFIVV+++GE +L+G +
Subjt:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFF----TYWLSSQSHYFPPDTISSIIKMVATPPS---FFSPSCLFVIVNFIVVYIVGEQKLTGAK

Query:  SAFMNTMYDEYYIERT--------------------------------LEMKYLN----------------PCENMKELVVEKFVEAKEEEGISPIEDDN
        S+  N MY+E Y+ERT                                LE K ++                 CE   E   E+ +E KEEE    IE + 
Subjt:  SAFMNTMYDEYYIERT--------------------------------LEMKYLN----------------PCENMKELVVEKFVEAKEEEGISPIEDDN

Query:  GIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEA
             E+E E    +  EELNKR EAFIARVNKQR LEA
Subjt:  GIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEA

M5XMS0 DUF4408 domain-containing protein3.3e-1636.68Show/hide
Query:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFF----TYWLSSQSHYFPPDTISSIIKMVATPPS---FFSPSCLFVIVNFIVVYIVGEQKLTGAK
        MD I  EKL A+K  YKK      N  IF+SLI           L S SH+FP    +  +  ++ P S   FF+P CLF++VNFIVV+++GE +L+G +
Subjt:  MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFF----TYWLSSQSHYFPPDTISSIIKMVATPPS---FFSPSCLFVIVNFIVVYIVGEQKLTGAK

Query:  SAFMNTMYDEYYIERT-----------------LEMKYLNPCENMKELVVEKFVEAKEEEGISPIEDDN-----GIGFSEKENEGDCK------------
        S+  N MY+E Y+ERT                  E+  L+  E+  +++ EK V+  +E+     +D++     G    EKE E + K            
Subjt:  SAFMNTMYDEYYIERT-----------------LEMKYLNPCENMKELVVEKFVEAKEEEGISPIEDDN-----GIGFSEKENEGDCK------------

Query:  ----LANEELNKRAEAFIARVNKQRKLEA
            +  EELNKR EAFIARVNKQR LEA
Subjt:  ----LANEELNKRAEAFIARVNKQRKLEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTCATCAATGCAGAGAAGCTTTTTGCCATAAAATATTGTTACAAGAAAAGCCAACTCTTCCTCTACAATCTCAATATCTTTCACTCTCTCATCTTCTTCTTCTT
TACCTATTGGCTTTCTTCTCAATCTCATTACTTTCCTCCCGACACGATTTCCTCGATAATCAAAATGGTTGCAACCCCGCCCTCGTTCTTCAGCCCGAGTTGCTTGTTTG
TTATTGTTAATTTCATTGTTGTCTACATCGTTGGAGAACAAAAGCTGACCGGTGCAAAATCAGCTTTCATGAACACAATGTATGATGAATACTATATTGAGAGGACTTTG
GAGATGAAGTACTTGAATCCTTGCGAAAATATGAAAGAATTGGTTGTTGAGAAATTTGTGGAAGCAAAGGAAGAGGAAGGGATCAGCCCCATTGAGGATGACAACGGTAT
CGGTTTTAGCGAAAAAGAAAACGAAGGGGACTGCAAGTTGGCCAACGAAGAGTTGAACAAAAGAGCTGAAGCCTTCATTGCAAGAGTTAACAAGCAAAGGAAGCTTGAAG
CTGTGGATTGTTTCTCATGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGTCATCAATGCAGAGAAGCTTTTTGCCATAAAATATTGTTACAAGAAAAGCCAACTCTTCCTCTACAATCTCAATATCTTTCACTCTCTCATCTTCTTCTTCTT
TACCTATTGGCTTTCTTCTCAATCTCATTACTTTCCTCCCGACACGATTTCCTCGATAATCAAAATGGTTGCAACCCCGCCCTCGTTCTTCAGCCCGAGTTGCTTGTTTG
TTATTGTTAATTTCATTGTTGTCTACATCGTTGGAGAACAAAAGCTGACCGGTGCAAAATCAGCTTTCATGAACACAATGTATGATGAATACTATATTGAGAGGACTTTG
GAGATGAAGTACTTGAATCCTTGCGAAAATATGAAAGAATTGGTTGTTGAGAAATTTGTGGAAGCAAAGGAAGAGGAAGGGATCAGCCCCATTGAGGATGACAACGGTAT
CGGTTTTAGCGAAAAAGAAAACGAAGGGGACTGCAAGTTGGCCAACGAAGAGTTGAACAAAAGAGCTGAAGCCTTCATTGCAAGAGTTAACAAGCAAAGGAAGCTTGAAG
CTGTGGATTGTTTCTCATGCTAG
Protein sequenceShow/hide protein sequence
MDVINAEKLFAIKYCYKKSQLFLYNLNIFHSLIFFFFTYWLSSQSHYFPPDTISSIIKMVATPPSFFSPSCLFVIVNFIVVYIVGEQKLTGAKSAFMNTMYDEYYIERTL
EMKYLNPCENMKELVVEKFVEAKEEEGISPIEDDNGIGFSEKENEGDCKLANEELNKRAEAFIARVNKQRKLEAVDCFSC