CuGenDBv2

Gene ID	CSPI06G07830
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	MADS-box transcription factor 8-like
Genome location	Chr6:6617894..6621094
RNA-Seq Expression	CSPI06G07830
Synteny	CSPI06G07830
Gene Ontology terms	GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process) GO:0005634 - nucleus (cellular component) GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039813.1 MADS-box transcription factor 8-like [Cucumis melo var. makuwa]

3.3e-29

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Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQS------QVEEPNFKKLDITQMVQLENQLESTLDKIKSQR
        MRYQSHLQGRNESPIDNDLQG SESLID+DAKDH        VSDETILVSLKK LQTIQ       QVEEPNFKKLDITQMVQLENQLE TLDKIKSQR
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQS------QVEEPNFKKLDITQMVQLENQLESTLDKIKSQR

XP_008459847.1 PREDICTED: MADS-box transcription factor 8-like [Cucumis melo]

1.7e-49

88.52

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Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE
        MRYQSHLQGRNESPIDNDLQG SESLID+DAKDH        VSDETILVSLKK LQTIQSQVEEPNFKKLDITQMVQLENQLE TLDKIKSQRIEAMIE
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE

Query:  NDDCWTYDMDMAMGMINSPPFN
        NDDCWTYDM++AMGMINSPPFN
Subjt:  NDDCWTYDMDMAMGMINSPPFN

XP_011656809.1 MADS-box transcription factor 8 [Cucumis sativus]

4.5e-55

100

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Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYD
        MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYD
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYD

Query:  MDMAMGMINSPPFN
        MDMAMGMINSPPFN
Subjt:  MDMAMGMINSPPFN

XP_023514717.1 MADS-box protein EJ2-like [Cucurbita pepo subsp. pepo]

1.2e-28

66.37

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Query:  RYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDM
        RYQSHL+GRN            E+L+DND KDH SDETILVSL KLLQTIQSQV EPNFKKL+   ++QLENQL++TL KIK QRIEAM+E DDCWT  M
Subjt:  RYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDM

Query:  DMAMGMINSPPFN
        +MA+GM+NS  FN
Subjt:  DMAMGMINSPPFN

XP_038907043.1 uncharacterized protein LOC120092871 [Benincasa hispida]

4.8e-41

76.8

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Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDA-----------KDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEA
        MRYQSHLQGRNESPI N LQGTSESLIDNDA           KDH SDET LVSL KLL+TI SQVEEPNFKKLD++QM+QLENQLE TLDKIKSQRIEA
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDA-----------KDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEA

Query:  MIENDDCWTYDMDMAMGMINSPPFN
        M+E+D  WTY+MDMAMG++NSPPFN
Subjt:  MIENDDCWTYDMDMAMGMINSPPFN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFD8 Uncharacterized protein

2.2e-55

100

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Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYD
        MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYD
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYD

Query:  MDMAMGMINSPPFN
        MDMAMGMINSPPFN
Subjt:  MDMAMGMINSPPFN

A0A1S3CCC5 MADS-box transcription factor 8-like

8.0e-50

88.52

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Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE
        MRYQSHLQGRNESPIDNDLQG SESLID+DAKDH        VSDETILVSLKK LQTIQSQVEEPNFKKLDITQMVQLENQLE TLDKIKSQRIEAMIE
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE

Query:  NDDCWTYDMDMAMGMINSPPFN
        NDDCWTYDM++AMGMINSPPFN
Subjt:  NDDCWTYDMDMAMGMINSPPFN

A0A5A7T9V4 MADS-box transcription factor 8-like

1.6e-29

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Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQS------QVEEPNFKKLDITQMVQLENQLESTLDKIKSQR
        MRYQSHLQGRNESPIDNDLQG SESLID+DAKDH        VSDETILVSLKK LQTIQ       QVEEPNFKKLDITQMVQLENQLE TLDKIKSQR
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQS------QVEEPNFKKLDITQMVQLENQLESTLDKIKSQR

A0A5D3DM40 MADS-box transcription factor 8-like

2.8e-26

83.91

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Query:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETIL-VSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQR
        MRYQSHLQGRNESPIDNDLQG SESLID+DAKDHVSDETIL VS + +L      VEEPNFKKLDITQMVQLENQLE TLDKIKSQR
Subjt:  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETIL-VSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQR

A0A6J1DPA0 MADS-box transcription factor 8-like isoform X3

2.4e-22

65.66

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Query:  RYQSHLQGR--NESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWT
        RYQSHL+G+  ++SPID D   + +        DH S++TILVSL KLLQTIQSQVEEP+FKKL++T+M+QLENQLE+TLDKIK QRIEAM+EN DCWT
Subjt:  RYQSHLQGR--NESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G77080.2 K-box region and MADS-box transcription factor family protein

2.3e-04

39.58

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Query:  KKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE
        K+LL+T+QS++EEPN   + +  ++ LE QLE+ L   ++++ E M+E
Subjt:  KKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE

AT1G77080.4 K-box region and MADS-box transcription factor family protein

2.3e-04

39.58

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Query:  KKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE
        K+LL+T+QS++EEPN   + +  ++ LE QLE+ L   ++++ E M+E
Subjt:  KKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE

AT1G77080.5 K-box region and MADS-box transcription factor family protein

2.3e-04

39.58

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Query:  KKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE
        K+LL+T+QS++EEPN   + +  ++ LE QLE+ L   ++++ E M+E
Subjt:  KKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE

Sequences

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CDS sequence

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ATGCGCTACCAAAGCCACCTTCAAGGGAGAAATGAAAGTCCAATTGACAACGACCTTCAAGGGACAAGTGAAAGTCTAATTGATAATGACGCAAAGGACCATGTATCTGA
TGAGACAATCTTGGTTTCACTCAAAAAGCTCCTACAAACTATTCAAAGTCAGGTTGAAGAACCAAATTTCAAGAAGCTCGATATAACTCAGATGGTGCAATTGGAGAATC
AACTTGAAAGCACACTTGACAAAATCAAATCTCAAAGAATTGAGGCAATGATAGAAAATGATGACTGTTGGACATACGACATGGATATGGCTATGGGCATGATCAACAGC
CCGCCATTTAATTAG

mRNA sequence

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ATAAGCTTTTATTTTAATTCTACAAAGTAGCCTTTTCAATACTACCTAGGGCATGTGCACACAATTTGTAGTTCATGCGCTCAACTTTAAACGACTTGAATTGTTCTTTT
ATTCTTCCAAGTGCTTTAATGAATGTACGCCCTCACTTTCTAGTGCTCTTTCATGATTGTGATGCAGCTTACTGAATATTATTATGCGCTACCAAAGCCACCTTCAAGGG
AGAAATGAAAGTCCAATTGACAACGACCTTCAAGGGACAAGTGAAAGTCTAATTGATAATGACGCAAAGGACCATGTATCTGATGAGACAATCTTGGTTTCACTCAAAAA
GCTCCTACAAACTATTCAAAGTCAGGTTGAAGAACCAAATTTCAAGAAGCTCGATATAACTCAGATGGTGCAATTGGAGAATCAACTTGAAAGCACACTTGACAAAATCA
AATCTCAAAGAATTGAGGCAATGATAGAAAATGATGACTGTTGGACATACGACATGGATATGGCTATGGGCATGATCAACAGCCCGCCATTTAATTAGTGAAATGGCACA
AACAAAACTATGGTTGTTGTTGTCCCACCAAATAAAATAAACCGAAGCTGCATAACTCTATGAAATCCTAACTCCTTCCTGACCTGCAGAAGCAAATATGCATAATATGT
AACATATAAGTACGACAGTTGTAGCATTTTTCAGGTTCTATGCTAAATGAAACCATGCATCAAACACTTAATCGATGCTTCTTCTACTAAGCCTTATTGTTCTAACTTGG
GAAAATTTTAGAGGAA

Protein sequence

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MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINS
PPFN

CSPI06G07830 (gene) of Cucumber (PI 183967) v1 genome