; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G07870 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G07870
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCiliary neurotrophic factor
Genome locationChr6:6647479..6648738
RNA-Seq ExpressionCSPI06G07870
SyntenyCSPI06G07870
Gene Ontology termsGO:0005783 - endoplasmic reticulum (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025378.1 hypothetical protein SDJN02_11873 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-5870.74Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR
        E+EQRLELI  AI RLL++NKNK+SSDRS + D DENG+  LL DLLSQIESLKEGTESEEL SALD LK+K ++S  ++  DDE SREDIVKELKK+KR
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR

Query:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ
        QN+LT CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTIV+N    S KQ+HDE S+LP L+I ELP +GLQ
Subjt:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ

XP_004140639.1 uncharacterized protein LOC101222559 [Cucumis sativus]1.0e-9197.89Show/hide
Query:  MEEEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKL
        MEEEEQRLELISHAIRRLL DNKNKKSSDRSSVDDGDENGNP LLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSRED+VKELKKL
Subjt:  MEEEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKL

Query:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ
        KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKIS+LPQVGLQ
Subjt:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ

XP_008459843.1 PREDICTED: uncharacterized protein LOC103498843 [Cucumis melo]1.4e-8592.55Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR
        EEEQRLELISHAI+RLLEDNKNKKSSDRSSVDDGDENGNP LLRDLLSQIESLKEGTES+E  SALDTLKTKVES IKEEIVDDECSREDIVKELKKLKR
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR

Query:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ
        QNLLTHCLLSVMIVLT+VWQLSEVSIILNVKDKISHPFRSLGNFISGMF+RPKTIVDNTDK SS+QD+DEVSLLPPLKI ELP +GLQ
Subjt:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ

XP_022155422.1 uncharacterized protein LOC111022569 [Momordica charantia]1.0e-5972.93Show/hide
Query:  EEEQRLELISHAIRRLL-EDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDEC-SREDIVKELKKL
        EEEQRLELI+ AIRRL+ E+N NKKSSDRSSV D DE  +  LLR+LLSQIESLKE  ESEE+ SA+DT KTK ++S++EEIVDDEC SRE+IV+ELKK+
Subjt:  EEEQRLELISHAIRRLL-EDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDEC-SREDIVKELKKL

Query:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKI
        KRQNL+THCLLSVMIV+TVVWQLSEVSIILN+KDKI+HPFRSLG+F+SG+ +RPKTIV++T+K SSKQDHDE ++LP +++
Subjt:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKI

XP_038874574.1 uncharacterized protein LOC120067172 [Benincasa hispida]2.2e-7886.46Show/hide
Query:  MEEEEQRLELISHAIRRLLED--NKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELK
        MEEEEQRLELIS AIRRLLE+  NKNKKSSDRSS+DDGDEN N  LLRDLLSQIESLKEGTESEE  S LDTLKTKVESS+KEEIVDDECSREDIVKELK
Subjt:  MEEEEQRLELISHAIRRLLED--NKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELK

Query:  KLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ
        KLKRQNLLTHCLLSVMI++TVVWQLSEVSIILNVKDKISHPF+SLGN ISG+ +RPKTIVDNT+K SSKQDHDE S+LPPLKI ELP V LQ
Subjt:  KLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ

TrEMBL top hitse value%identityAlignment
A0A0A0K9P4 Uncharacterized protein4.8e-9297.89Show/hide
Query:  MEEEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKL
        MEEEEQRLELISHAIRRLL DNKNKKSSDRSSVDDGDENGNP LLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSRED+VKELKKL
Subjt:  MEEEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKL

Query:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ
        KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKIS+LPQVGLQ
Subjt:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ

A0A1S3CAM6 uncharacterized protein LOC1034988436.8e-8692.55Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR
        EEEQRLELISHAI+RLLEDNKNKKSSDRSSVDDGDENGNP LLRDLLSQIESLKEGTES+E  SALDTLKTKVES IKEEIVDDECSREDIVKELKKLKR
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR

Query:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ
        QNLLTHCLLSVMIVLT+VWQLSEVSIILNVKDKISHPFRSLGNFISGMF+RPKTIVDNTDK SS+QD+DEVSLLPPLKI ELP +GLQ
Subjt:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ

A0A5A7T973 Uncharacterized protein6.8e-8692.55Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR
        EEEQRLELISHAI+RLLEDNKNKKSSDRSSVDDGDENGNP LLRDLLSQIESLKEGTES+E  SALDTLKTKVES IKEEIVDDECSREDIVKELKKLKR
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKR

Query:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ
        QNLLTHCLLSVMIVLT+VWQLSEVSIILNVKDKISHPFRSLGNFISGMF+RPKTIVDNTDK SS+QD+DEVSLLPPLKI ELP +GLQ
Subjt:  QNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ

A0A6J1DPA5 uncharacterized protein LOC1110225694.9e-6072.93Show/hide
Query:  EEEQRLELISHAIRRLL-EDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDEC-SREDIVKELKKL
        EEEQRLELI+ AIRRL+ E+N NKKSSDRSSV D DE  +  LLR+LLSQIESLKE  ESEE+ SA+DT KTK ++S++EEIVDDEC SRE+IV+ELKK+
Subjt:  EEEQRLELISHAIRRLL-EDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDEC-SREDIVKELKKL

Query:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKI
        KRQNL+THCLLSVMIV+TVVWQLSEVSIILN+KDKI+HPFRSLG+F+SG+ +RPKTIV++T+K SSKQDHDE ++LP +++
Subjt:  KRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKI

A0A6J1KTZ8 uncharacterized protein LOC1114976201.0e-5766.34Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESL------------KEGTESEELISALDTLKTKVESSIKEEIVDD----
        E+EQRLELI  AI RLL++NKNK+SSDRS + D DENG+  LL DLLSQIESL            KEGTESEEL SALD LK K ++S+KEEI DD    
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESL------------KEGTESEELISALDTLKTKVESSIKEEIVDD----

Query:  -ECSREDIVKELKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELP
         E S+EDIVKELKK+KRQN+LT CL+SVMIV+TVVWQLSEVSI+LNVKD+ISHPFR LG+ ISG  +RPKTI++N    S KQ+HDE S+LPPL+I ELP
Subjt:  -ECSREDIVKELKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELP

Query:  QVGLQ
         VGL+
Subjt:  QVGLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27300.1 unknown protein1.3e-2035.9Show/hide
Query:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIES--------LKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIV
        E  + +E +S AI +LL + + +++S  + ++D D+      L  L+SQ+ES        +  G E E+   + D+  +K +S  + ++   E S E+I 
Subjt:  EEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIES--------LKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIV

Query:  KELKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFR---RP-KTIVDNTDKISSKQDHDEVSLL-PPLKISEL
        K++KK+K+QN +TH LLS  I+LT+VWQLSE S+I  +KD+ISHP RS+G  ++GMF+   RP K  +  T   + + +H   S   P L++ EL
Subjt:  KELKKLKRQNLLTHCLLSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFR---RP-KTIVDNTDKISSKQDHDEVSLL-PPLKISEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAAGAGCAACGCCTAGAGTTGATTAGCCATGCCATTAGGAGGCTACTTGAAGATAACAAGAACAAGAAATCCTCTGATCGGAGCTCCGTCGACGATGGCGA
TGAAAACGGAAACCCTTTTCTCCTCCGCGACTTGCTCTCTCAGATTGAGTCACTGAAAGAAGGAACAGAATCAGAAGAGTTAATTTCTGCATTAGATACTTTGAAAACAA
AAGTTGAAAGTTCTATTAAAGAGGAAATTGTTGATGATGAGTGCAGTAGAGAAGACATTGTCAAAGAGTTGAAGAAGCTGAAGAGGCAAAACCTTTTAACTCATTGTCTT
CTCTCAGTGATGATTGTATTGACTGTTGTTTGGCAGCTCTCTGAGGTCTCCATTATCTTGAATGTAAAAGATAAAATCAGCCATCCCTTTAGATCTTTGGGTAATTTTAT
CTCAGGAATGTTCAGACGCCCCAAAACCATTGTTGATAATACAGACAAGATTTCATCTAAACAAGACCATGATGAAGTTTCATTGCTTCCCCCTCTCAAAATTTCAGAAC
TTCCTCAAGTGGGTTTGCAATAA
mRNA sequenceShow/hide mRNA sequence
CCCATGGCGGCCTCCATCAATGGCGGAACCCGATACTGGAAGAGCGATATTGAAAATCCGTCACCTCTTCCCTTCCATAGAAAATTTCAAGTGAAACAAATCCATGGAAG
AAGAAGAGCAACGCCTAGAGTTGATTAGCCATGCCATTAGGAGGCTACTTGAAGATAACAAGAACAAGAAATCCTCTGATCGGAGCTCCGTCGACGATGGCGATGAAAAC
GGAAACCCTTTTCTCCTCCGCGACTTGCTCTCTCAGATTGAGTCACTGAAAGAAGGAACAGAATCAGAAGAGTTAATTTCTGCATTAGATACTTTGAAAACAAAAGTTGA
AAGTTCTATTAAAGAGGAAATTGTTGATGATGAGTGCAGTAGAGAAGACATTGTCAAAGAGTTGAAGAAGCTGAAGAGGCAAAACCTTTTAACTCATTGTCTTCTCTCAG
TGATGATTGTATTGACTGTTGTTTGGCAGCTCTCTGAGGTCTCCATTATCTTGAATGTAAAAGATAAAATCAGCCATCCCTTTAGATCTTTGGGTAATTTTATCTCAGGA
ATGTTCAGACGCCCCAAAACCATTGTTGATAATACAGACAAGATTTCATCTAAACAAGACCATGATGAAGTTTCATTGCTTCCCCCTCTCAAAATTTCAGAACTTCCTCA
AGTGGGTTTGCAATAATTTTGGATTTTAATGGCTAAAAACATTGCTTTTCCATTTGTTCTTGAACCAACAAAGGGGAGATGGGGTACAGAGAATGAAGCTCCCAAATGGA
GATAAGAAGATGGTTTGGCTAGCAATTTTGGTCCCTTCAGACATTACTTTTTTCTTTTGATAGTTTAATGAATTTGATTCTGTCTACTATAGTCGATTGTCTATTGTATT
ATGGCAAAACTATGCACCTCTTTAAGAATTTTACAATTTTGATCTCAAA
Protein sequenceShow/hide protein sequence
MEEEEQRLELISHAIRRLLEDNKNKKSSDRSSVDDGDENGNPFLLRDLLSQIESLKEGTESEELISALDTLKTKVESSIKEEIVDDECSREDIVKELKKLKRQNLLTHCL
LSVMIVLTVVWQLSEVSIILNVKDKISHPFRSLGNFISGMFRRPKTIVDNTDKISSKQDHDEVSLLPPLKISELPQVGLQ