CuGenDBv2

Gene ID	CSPI06G08080
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	major pollen allergen Ole e 6-like
Genome location	Chr6:6802470..6803228
RNA-Seq Expression	CSPI06G08080
Synteny	CSPI06G08080
Gene Ontology terms	GO:0009733 - response to auxin (biological process) GO:0010223 - secondary shoot formation (biological process) GO:0016121 - carotene catabolic process (biological process) GO:1901601 - strigolactone biosynthetic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR015333 - Pollen allergen ole e 6 IPR036466 - Pollen allergen ole e 6 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039790.1 carotenoid cleavage dioxygenase 7 [Cucumis melo var. makuwa]

9.5e-34

86.75

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Query:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVE
        M KKMMGVLLICIV+MAALEFSI NGEEK+DKYESKFDA+YKSCYESCEKECL NG NGQS+CEVKCDEDCDEKEVADKL ++
Subjt:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVE

KAA0039793.1 carotenoid cleavage dioxygenase 7 [Cucumis melo var. makuwa]

6.2e-33

84.88

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Query:  MGKKMMGV-LLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVEVN
        M KKMMGV LLICIV+MAALEFSI NGEEK+D+YESKFDARY+SCYESCEKECL N  NG+S+CEVKCDEDCDEKEVADKLHVE+N
Subjt:  MGKKMMGV-LLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVEVN

KGN46519.1 hypothetical protein Csa_005196 [Cucumis sativus]

4.7e-33

88.75

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Query:  KKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHV
        KKMMGVLLICIV+MAALEFSIVNGEEKEDKYESKFDA+YK+CYESCEKECL NG NGQS+CEVKCDEDC EKE ADKLH+
Subjt:  KKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHV

KGN46520.1 hypothetical protein Csa_005728 [Cucumis sativus]

4.7e-25

65.88

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Query:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVEVN
        M KKMM V L+CIV++A L+F + N E+   KYE+KFDA+YKSCYE+CEKECL N  NG+S+CEVKCDEDC EKE ADKLH+E++
Subjt:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVEVN

XP_016902456.1 PREDICTED: carotenoid cleavage dioxygenase 7, chloroplastic isoform X1 [Cucumis melo]

9.5e-34

86.75

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Query:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVE
        M KKMMGVLLICIV+MAALEFSI NGEEK+DKYESKFDA+YKSCYESCEKECL NG NGQS+CEVKCDEDCDEKEVADKL ++
Subjt:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCI6 Uncharacterized protein

2.3e-33

88.75

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Query:  KKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHV
        KKMMGVLLICIV+MAALEFSIVNGEEKEDKYESKFDA+YK+CYESCEKECL NG NGQS+CEVKCDEDC EKE ADKLH+
Subjt:  KKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHV

A0A0A0KFH6 Uncharacterized protein

2.8e-39

97.65

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Query:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVEVN
        M KKMMGVLLICIVIMA LEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVEVN
Subjt:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVEVN

A0A1S4E2K0 carotenoid cleavage dioxygenase 7, chloroplastic isoform X1

4.6e-34

86.75

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Query:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVE
        M KKMMGVLLICIV+MAALEFSI NGEEK+DKYESKFDA+YKSCYESCEKECL NG NGQS+CEVKCDEDCDEKEVADKL ++
Subjt:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVE

A0A5A7T9T6 Carotenoid cleavage dioxygenase 7

3.0e-33

84.88

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Query:  MGKKMMGV-LLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVEVN
        M KKMMGV LLICIV+MAALEFSI NGEEK+D+YESKFDARY+SCYESCEKECL N  NG+S+CEVKCDEDCDEKEVADKLHVE+N
Subjt:  MGKKMMGV-LLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVEVN

A0A5D3DM52 Carotenoid cleavage dioxygenase 7

4.6e-34

86.75

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Query:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVE
        M KKMMGVLLICIV+MAALEFSI NGEEK+DKYESKFDA+YKSCYESCEKECL NG NGQS+CEVKCDEDCDEKEVADKL ++
Subjt:  MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVE

SwissProt top hits

e value

%identity

Alignment

O24172 Major pollen allergen Ole e 6

1.8e-06

51.16

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Query:  DARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKL
        +A++K CY++C KEC   G NG ++CE+KCD DC  K+V +KL
Subjt:  DARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKL

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGGGAAGAAGATGATGGGAGTGTTGTTGATATGCATTGTAATAATGGCTGCTTTGGAGTTTTCGATTGTCAATGGAGAAGAGAAGGAGGACAAATACGAGTCCAAATT
TGATGCTAGGTACAAATCATGCTATGAAAGTTGTGAGAAAGAATGTCTTACAAATGGTAAAAATGGTCAAAGTTATTGCGAAGTTAAATGCGATGAAGATTGCGATGAAA
AAGAAGTTGCTGATAAGTTGCACGTTGAAGTGAATTGA

mRNA sequence

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AAAGCACTTGTAAAAAGGCACAATCCAAAGCAAGAAAAGAAAATTATGGGGAAGAAGATGATGGGAGTGTTGTTGATATGCATTGTAATAATGGCTGCTTTGGAGTTTTC
GATTGTCAATGGAGAAGAGAAGGAGGACAAATACGAGTCCAAATTTGATGCTAGGTACAAATCATGCTATGAAAGTTGTGAGAAAGAATGTCTTACAAATGGTAAAAATG
GTCAAAGTTATTGCGAAGTTAAATGCGATGAAGATTGCGATGAAAAAGAAGTTGCTGATAAGTTGCACGTTGAAGTGAATTGAGGAATGAAAAACAAAGGAAAGAGGAGG
CTCTTGAGAAGGATCAAATTAGTTCATGAGAGGAAGTTAATAATATGTAATTTTAACATTCAATTTTTTTGGTCATTAATATAGGTGAATCCACCATTTTCATGTTTTTT
TTTTTTCTTTCAAGGAATAATTTTTCTGCTTCTTAATAATTTTTATTTAGAAACAAAAAATAGTTCGATAAATGCCACAAACGTTATTATATATGATTGTTGAGTATAAC
TCCTCCC

Protein sequence

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MGKKMMGVLLICIVIMAALEFSIVNGEEKEDKYESKFDARYKSCYESCEKECLTNGKNGQSYCEVKCDEDCDEKEVADKLHVEVN

CSPI06G08080 (gene) of Cucumber (PI 183967) v1 genome