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CSPI06G08390 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G08390
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMajor centromere autoantigen B
Genome locationChr6:7065702..7066226
RNA-Seq ExpressionCSPI06G08390
SyntenyCSPI06G08390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039742.1 hypothetical protein E6C27_scaffold122G00020 [Cucumis melo var. makuwa]1.1e-3175.19Show/hide
Query:  FADENEALNAKELNPVEDEETLNKDEAGVAEEEGVLEEDVPVEAEAREKENGEKVEEVEEVEEEKEKEPKPKEEE---GLEVGLGNGEEEEVGFEEEEEE
        FADE+EA N KELNPVEDEET NKDEA  AEEEG LEED PVEAEAREKE G      EEVEEEKE+EPKPKEEE   GLEVGLGNGE+EEVGF   EEE
Subjt:  FADENEALNAKELNPVEDEETLNKDEAGVAEEEGVLEEDVPVEAEAREKENGEKVEEVEEVEEEKEKEPKPKEEE---GLEVGLGNGEEEEVGFEEEEEE

Query:  EEDERDKGKGDDPKEKVVDPKEKPIEEIKMEKK
        EED+RDKG+ DDPKEKVVDPKEKP+ E   E++
Subjt:  EEDERDKGKGDDPKEKVVDPKEKPIEEIKMEKK
XP_011658400.1 cilia- and flagella-associated protein 251 [Cucumis sativus]2.1e-4890.14Show/hide
Query:  MVVNQTLYILVCIYFADENEALNAKELNPVEDEETLNKDEAGVAEEEGVLEEDVPVEAEAREKENGEKVEEVEEVEEEKEKEPKPKEEEGLEVGLGNGEE
        MVVNQTLYILVCIYFADENEALNAKELNPVEDEETLNKDEAGVAEEEGVLE+D  VEAEAREKENGEK   VEEVEEEKEKEPKPKEEEGLEVGLGNGE+
Subjt:  MVVNQTLYILVCIYFADENEALNAKELNPVEDEETLNKDEAGVAEEEGVLEEDVPVEAEAREKENGEKVEEVEEVEEEKEKEPKPKEEEGLEVGLGNGEE

Query:  EEVGF-EEEEEEEEDERDKGKGDDPKEKVVDPKEKPIEEIKM
        EEVGF EEEEEEEEDERDKGKGDDPKEKV DPK KP   I M
Subjt:  EEVGF-EEEEEEEEDERDKGKGDDPKEKVVDPKEKPIEEIKM
TrEMBL top hitse value%identityAlignment
A0A0A0KDT9 Uncharacterized protein1.0e-4890.14Show/hide
Query:  MVVNQTLYILVCIYFADENEALNAKELNPVEDEETLNKDEAGVAEEEGVLEEDVPVEAEAREKENGEKVEEVEEVEEEKEKEPKPKEEEGLEVGLGNGEE
        MVVNQTLYILVCIYFADENEALNAKELNPVEDEETLNKDEAGVAEEEGVLE+D  VEAEAREKENGEK   VEEVEEEKEKEPKPKEEEGLEVGLGNGE+
Subjt:  MVVNQTLYILVCIYFADENEALNAKELNPVEDEETLNKDEAGVAEEEGVLEEDVPVEAEAREKENGEKVEEVEEVEEEKEKEPKPKEEEGLEVGLGNGEE

Query:  EEVGF-EEEEEEEEDERDKGKGDDPKEKVVDPKEKPIEEIKM
        EEVGF EEEEEEEEDERDKGKGDDPKEKV DPK KP   I M
Subjt:  EEVGF-EEEEEEEEDERDKGKGDDPKEKVVDPKEKPIEEIKM
A0A5A7T8D7 Major centromere autoantigen B5.2e-3275.19Show/hide
Query:  FADENEALNAKELNPVEDEETLNKDEAGVAEEEGVLEEDVPVEAEAREKENGEKVEEVEEVEEEKEKEPKPKEEE---GLEVGLGNGEEEEVGFEEEEEE
        FADE+EA N KELNPVEDEET NKDEA  AEEEG LEED PVEAEAREKE G      EEVEEEKE+EPKPKEEE   GLEVGLGNGE+EEVGF   EEE
Subjt:  FADENEALNAKELNPVEDEETLNKDEAGVAEEEGVLEEDVPVEAEAREKENGEKVEEVEEVEEEKEKEPKPKEEE---GLEVGLGNGEEEEVGFEEEEEE

Query:  EEDERDKGKGDDPKEKVVDPKEKPIEEIKMEKK
        EED+RDKG+ DDPKEKVVDPKEKP+ E   E++
Subjt:  EEDERDKGKGDDPKEKVVDPKEKPIEEIKMEKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTCAATCAAACATTATACATTTTGGTGTGTATTTACTTTGCTGATGAGAATGAAGCCCTGAATGCGAAAGAATTGAATCCAGTTGAGGATGAAGAAACCTTGAA
TAAGGATGAAGCTGGAGTTGCTGAGGAAGAAGGGGTACTAGAGGAAGATGTTCCAGTGGAAGCGGAGGCGAGGGAGAAAGAGAATGGAGAGAAAGTAGAGGAAGTAGAGG
AAGTAGAGGAGGAGAAAGAGAAAGAGCCAAAGCCAAAGGAAGAAGAAGGATTAGAGGTTGGATTGGGAAATGGGGAGGAAGAGGAAGTAGGGTTTGAGGAGGAGGAGGAG
GAGGAGGAAGATGAAAGAGATAAAGGGAAAGGGGATGATCCAAAGGAAAAGGTGGTGGATCCGAAGGAGAAACCAATAGAGGAAATTAAAATGGAGAAGAAGCTTGAGAG
GTGGAAGATCCAAAGCCAAAACCTGACATCTCGATCGATATGTGGTGGAAGGGACTGTGAAGTGAAGGGTTTTAGAAGTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTCAATCAAACATTATACATTTTGGTGTGTATTTACTTTGCTGATGAGAATGAAGCCCTGAATGCGAAAGAATTGAATCCAGTTGAGGATGAAGAAACCTTGAA
TAAGGATGAAGCTGGAGTTGCTGAGGAAGAAGGGGTACTAGAGGAAGATGTTCCAGTGGAAGCGGAGGCGAGGGAGAAAGAGAATGGAGAGAAAGTAGAGGAAGTAGAGG
AAGTAGAGGAGGAGAAAGAGAAAGAGCCAAAGCCAAAGGAAGAAGAAGGATTAGAGGTTGGATTGGGAAATGGGGAGGAAGAGGAAGTAGGGTTTGAGGAGGAGGAGGAG
GAGGAGGAAGATGAAAGAGATAAAGGGAAAGGGGATGATCCAAAGGAAAAGGTGGTGGATCCGAAGGAGAAACCAATAGAGGAAATTAAAATGGAGAAGAAGCTTGAGAG
GTGGAAGATCCAAAGCCAAAACCTGACATCTCGATCGATATGTGGTGGAAGGGACTGTGAAGTGAAGGGTTTTAGAAGTTGTTAG
Protein sequenceShow/hide protein sequence
MVVNQTLYILVCIYFADENEALNAKELNPVEDEETLNKDEAGVAEEEGVLEEDVPVEAEAREKENGEKVEEVEEVEEEKEKEPKPKEEEGLEVGLGNGEEEEVGFEEEEE
EEEDERDKGKGDDPKEKVVDPKEKPIEEIKMEKKLERWKIQSQNLTSRSICGGRDCEVKGFRSC