; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G08540 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G08540
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionserine/arginine repetitive matrix protein 1
Genome locationChr6:7184675..7186321
RNA-Seq ExpressionCSPI06G08540
SyntenyCSPI06G08540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459744.1 PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo]2.3e-6082.1Show/hide
Query:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA
        MWAASSTSP PS  RL ITT+ PP  P+S+F A S P   DAEN KPNNS +IK FGHKILSAVNSPTP+SLNQTTPKHES PEA QISGSDVLRALQKA
Subjt:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA

Query:  AAVKEKIRTQQVKE-KKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDP
        AAVKEK RTQQVKE KKKKKEGAATEDS SEMNHRVRPLKI RDWGLRLTQLEKRLLE+S+P
Subjt:  AAVKEKIRTQQVKE-KKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDP

XP_011656857.1 uncharacterized protein LOC105435778 [Cucumis sativus]5.2e-81100Show/hide
Query:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA
        MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA
Subjt:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA

Query:  AAVKEKIRTQQVKEKKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
        AAVKEKIRTQQVKEKKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
Subjt:  AAVKEKIRTQQVKEKKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV

XP_022959476.1 uncharacterized protein LOC111460438 [Cucurbita moschata]9.9e-4063.25Show/hide
Query:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA
        MW A STSP PSC RL + T  PPTPP+S   A +QP  TDA+N  PNNS+SIK FGHKILSA NS  PKS      K ES  E AQISG DVLRALQKA
Subjt:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA

Query:  AAVKEKIRTQQVKEKKK----KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
        AAVKEK RT+Q KE+KK      EG+ +++  SEMN RVRPL+I  DWGLRLT+LEKRL EIS+ V
Subjt:  AAVKEKIRTQQVKEKKK----KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV

XP_023006674.1 uncharacterized protein LOC111499329 [Cucurbita maxima]3.8e-3963.25Show/hide
Query:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA
        MWAA STSP PSC RL + T   PTPP+S   A +QP  TDA+N  PNNSSSIK FGHKILSA  S  PKS      K ES  E A+ISG DVLRALQKA
Subjt:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA

Query:  AAVKEKIRTQQVKEKKK----KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
        AAVKEK RT+QVKE+KK      EG+ +++  SEMN RVRPL+I  DWGLRLT+LEKRL EIS+ V
Subjt:  AAVKEKIRTQQVKEKKK----KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV

XP_038906928.1 uncharacterized protein LOC120092795 [Benincasa hispida]8.6e-5273.49Show/hide
Query:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSL----NQTTPKHESHPEAAQISGSDVLRA
        MWAASST P PSCHRL I T   PTPP+S   A SQP  TDA N  PN+SSSIK FGHKILSAVNSP PKSL    N+TTPK E+ PEAAQISGSD+LRA
Subjt:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSL----NQTTPKHESHPEAAQISGSDVLRA

Query:  LQKAAAVKEKIRTQQVKEKKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
        LQKAAAVKEK RT+QV  K KKKEG  TE S SEMNHRVRPLKI  DWGLRL+QLEKRL E S+PV
Subjt:  LQKAAAVKEKIRTQQVKEKKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV

TrEMBL top hitse value%identityAlignment
A0A0A0KCJ8 Uncharacterized protein2.5e-81100Show/hide
Query:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA
        MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA
Subjt:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA

Query:  AAVKEKIRTQQVKEKKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
        AAVKEKIRTQQVKEKKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
Subjt:  AAVKEKIRTQQVKEKKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV

A0A1S3CAW4 uncharacterized protein LOC1034987861.1e-6082.1Show/hide
Query:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA
        MWAASSTSP PS  RL ITT+ PP  P+S+F A S P   DAEN KPNNS +IK FGHKILSAVNSPTP+SLNQTTPKHES PEA QISGSDVLRALQKA
Subjt:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA

Query:  AAVKEKIRTQQVKE-KKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDP
        AAVKEK RTQQVKE KKKKKEGAATEDS SEMNHRVRPLKI RDWGLRLTQLEKRLLE+S+P
Subjt:  AAVKEKIRTQQVKE-KKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDP

A0A5D3DMB8 Chaperone ClpB1.1e-6082.1Show/hide
Query:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA
        MWAASSTSP PS  RL ITT+ PP  P+S+F A S P   DAEN KPNNS +IK FGHKILSAVNSPTP+SLNQTTPKHES PEA QISGSDVLRALQKA
Subjt:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA

Query:  AAVKEKIRTQQVKE-KKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDP
        AAVKEK RTQQVKE KKKKKEGAATEDS SEMNHRVRPLKI RDWGLRLTQLEKRLLE+S+P
Subjt:  AAVKEKIRTQQVKE-KKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDP

A0A6J1H4Y8 uncharacterized protein LOC1114604384.8e-4063.25Show/hide
Query:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA
        MW A STSP PSC RL + T  PPTPP+S   A +QP  TDA+N  PNNS+SIK FGHKILSA NS  PKS      K ES  E AQISG DVLRALQKA
Subjt:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA

Query:  AAVKEKIRTQQVKEKKK----KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
        AAVKEK RT+Q KE+KK      EG+ +++  SEMN RVRPL+I  DWGLRLT+LEKRL EIS+ V
Subjt:  AAVKEKIRTQQVKEKKK----KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV

A0A6J1L2U1 uncharacterized protein LOC1114993291.8e-3963.25Show/hide
Query:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA
        MWAA STSP PSC RL + T   PTPP+S   A +QP  TDA+N  PNNSSSIK FGHKILSA  S  PKS      K ES  E A+ISG DVLRALQKA
Subjt:  MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKA

Query:  AAVKEKIRTQQVKEKKK----KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
        AAVKEK RT+QVKE+KK      EG+ +++  SEMN RVRPL+I  DWGLRLT+LEKRL EIS+ V
Subjt:  AAVKEKIRTQQVKEKKK----KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46735.1 unknown protein3.8e-0529.14Show/hide
Query:  PPLSVFCAMSQPSGTDAENI---------KPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKK
        P ++   A SQP   + + I         K   S S+ G G +IL       P+         +  P+  +ISGSDVL A+Q+A A +++    + K K 
Subjt:  PPLSVFCAMSQPSGTDAENI---------KPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKK

Query:  K-------KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISD
        +          G  T D+  + ++ V PL+I  DWG RL + EK L E  +
Subjt:  K-------KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGCTGCCTCTTCCACCTCACCCATCCCCTCCTGCCACCGCCTCACCATCACAACCAGTCGTCCGCCCACCCCTCCGTTATCAGTCTTCTGCGCAATGTCTCAGCC
ATCCGGAACGGATGCTGAAAACATCAAACCAAACAACAGTAGCAGCATCAAAGGCTTTGGCCACAAAATTCTCTCAGCAGTCAACTCCCCAACTCCCAAATCCCTAAACC
AAACGACCCCCAAACACGAATCCCATCCGGAGGCTGCCCAAATTAGTGGGTCCGATGTTCTAAGGGCATTGCAGAAGGCGGCTGCCGTGAAGGAGAAGATCAGAACCCAA
CAAGTTAAAGAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTCAATCTGAGATGAATCATAGAGTGAGGCCTCTTAAGATCAACAGAGATTGGGGATTGAG
GCTCACCCAATTGGAAAAACGCCTTCTGGAAATCTCTGACCCGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTTTATTGTTAAAATTTTTAACCATCTCATTTAGTCATTAGATAACTCCTAAAACTTTATCAAAATTTACACGTTTGAACTTGGAGCTTCTCTTTCCTTGGTTGTCT
TCACTCCAAACTATGTGGGCTGCCTCTTCCACCTCACCCATCCCCTCCTGCCACCGCCTCACCATCACAACCAGTCGTCCGCCCACCCCTCCGTTATCAGTCTTCTGCGC
AATGTCTCAGCCATCCGGAACGGATGCTGAAAACATCAAACCAAACAACAGTAGCAGCATCAAAGGCTTTGGCCACAAAATTCTCTCAGCAGTCAACTCCCCAACTCCCA
AATCCCTAAACCAAACGACCCCCAAACACGAATCCCATCCGGAGGCTGCCCAAATTAGTGGGTCCGATGTTCTAAGGGCATTGCAGAAGGCGGCTGCCGTGAAGGAGAAG
ATCAGAACCCAACAAGTTAAAGAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTCAATCTGAGATGAATCATAGAGTGAGGCCTCTTAAGATCAACAGAGA
TTGGGGATTGAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATCTCTGACCCGGTTTGATGATTCTTATTTGAATTGTCATTGATTTGTATATTCATATGTTGTGTTT
TATGTAGATTTTAAGTCTCCGTGTGTTCAATTTTCAAGTAAAATGGCAAATCTTTCATATTTTTGGTACTTCACCTTGTTTTCACAACGTTCTGTAAATGATGGGCGATG
GGCGTAGTAGTTAGTAAAGAAATGACATTACCAAAATTTGAATACAATACCTTACTACTAGAGTTAATAGTTCACTCATATTCGTTATGCCACTCCTCCATTTGGGATTC
CTTCTGAGTTTTGTTCTCATTCTTGAACTAGATGAAACAAACCTCTTGTTTATAGTGGTTGATAGTTGTTTGTTTCTTGTTGTGCTTCGTGGTCAGAAATTAAAAGGGGA
TGGAGTTGTGTGAATTCGAAAGAATTATGAAGTTTTGAGTGTAAACTCGTATGATCAGGGTGGGAGTTGAGGCAAAATTTTGATTCTTTTTAGTTGTGGAGCTACGAACT
CGGCCGAACAACTCTGCTCCCCCTTGTCCAGAACTCTATGCACTATGCTCTACCTAATAGATAGGGAGACTAAACTGATAGTCTCAGGGAGTTTTGAACTCCTAGGCTCA
CAACGTGTTAGGAGTTAAAAAGTATAAAATTGACAGTCCTTTAGTTGTCGAAGTTATGAACTCATAGGGCCAAACAAGAAGTTGAGAACTCCACTCCTTGCAACCGATAA
GTGGCCAACCACATCATGTCAGTCCATCAAGGACTGAAGGAGAGCTATTGGAAGCTACCCAGGACTTGATTGTTTGTATCTACCTGTTACATTTGTCTAAAAGATAATAG
AAAATTATAATAATGGACAAAAAAGAGCTGCAAGACTATAATACACGACAGAGTATTCTAAGAAGTGAGATTAGTTTCATAATCCATTAAGATTCAACCATATTGCCGTT
GGTCCGGACCAGATGAATTGGCCACCGGAATTGGGTGAAGTTCATATCCTAGAGCTCTTGTTACATATTTCCGCGCTGTTATTGAGAACATATATCTTTGTTTACTT
Protein sequenceShow/hide protein sequence
MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQ
QVKEKKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV