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CSPI06G08740 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G08740
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionZinc finger, FYVE/PHD-type
Genome locationChr6:7347825..7348773
RNA-Seq ExpressionCSPI06G08740
SyntenyCSPI06G08740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575224.1 hypothetical protein SDJN03_25863, partial [Cucurbita argyrosperma subsp. sororia]2.7e-5681.82Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS-
        MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+SRSHG+SSRRPP T T A GI++RS YSGDK IKHHH DS 
Subjt:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS-

Query:  -PTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC
           +KGK GGAGS +SPRPTTRRYKLLKDVMC
Subjt:  -PTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC

XP_004140491.1 uncharacterized protein LOC101205257 [Cucumis sativus]2.1e-72100Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSP
        MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSP
Subjt:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSP

Query:  TEKGKHGGAGSTSSPRPTTRRYKLLKDVMC
        TEKGKHGGAGSTSSPRPTTRRYKLLKDVMC
Subjt:  TEKGKHGGAGSTSSPRPTTRRYKLLKDVMC

XP_008467003.1 PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo]7.6e-6795.45Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST-SRSHG-SSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHD
        MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST SRSHG SSSRRPPSTGTNATGIM+RSEYS DKLIKHHH D
Subjt:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST-SRSHG-SSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHD

Query:  SPTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC
        SPTEKGKHGGAGST SPRPTTRRYKLLKDVMC
Subjt:  SPTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC

XP_022959271.1 uncharacterized protein LOC111460301 [Cucurbita moschata]6.1e-5681.82Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS-
        MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+SRSHG+SSRRPP T T   GIM+RS YSGDK IKHHH DS 
Subjt:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS-

Query:  -PTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC
           +KGK GGAGS +SPRPTTRRYKLLKDVMC
Subjt:  -PTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC

XP_038875571.1 uncharacterized protein LOC120067983 [Benincasa hispida]2.5e-6289.39Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSP
        MVDLQIVCCMCGDIGFPDKLF CNKC NRFQHSYCSNYYSESAEPIEVCDWCQCEGR++SRSHGSSSRRPPSTGTNA G+M+RSEYSG+K IKHHH DS 
Subjt:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSP

Query:  T--EKGKHGGAGSTSSPRPTTRRYKLLKDVMC
        T  EKGKHGGAGST SPRPTTRRYKLLKDVMC
Subjt:  T--EKGKHGGAGSTSSPRPTTRRYKLLKDVMC

TrEMBL top hitse value%identityAlignment
A0A0A0KFQ0 Uncharacterized protein1.0e-72100Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSP
        MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSP
Subjt:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSP

Query:  TEKGKHGGAGSTSSPRPTTRRYKLLKDVMC
        TEKGKHGGAGSTSSPRPTTRRYKLLKDVMC
Subjt:  TEKGKHGGAGSTSSPRPTTRRYKLLKDVMC

A0A1S3CSH8 uncharacterized protein LOC1035044133.7e-6795.45Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST-SRSHG-SSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHD
        MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST SRSHG SSSRRPPSTGTNATGIM+RSEYS DKLIKHHH D
Subjt:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST-SRSHG-SSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHD

Query:  SPTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC
        SPTEKGKHGGAGST SPRPTTRRYKLLKDVMC
Subjt:  SPTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC

A0A5D3BDU2 Uncharacterized protein8.0e-5488.62Show/hide
Query:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST-SRSHG-SSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHG
        MCGDIGFPDKLFHCNK        YCSNYYSESAEPIEVCDWCQCEGRST SRSHG SSSRRPPSTGTNATGIM+RSEYS DKLIKHHH DSPTEKGKHG
Subjt:  MCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRST-SRSHG-SSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHG

Query:  GAGSTSSPRPTTRRYKLLKDVMC
        GAGST SPRPTTRRYKLLKDVMC
Subjt:  GAGSTSSPRPTTRRYKLLKDVMC

A0A6J1H4E1 uncharacterized protein LOC1114603012.9e-5681.82Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS-
        MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+SRSHG+SSRRPP T T   GIM+RS YSGDK IKHHH DS 
Subjt:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDS-

Query:  -PTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC
           +KGK GGAGS +SPRPTTRRYKLLKDVMC
Subjt:  -PTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC

A0A6J1L0S8 uncharacterized protein LOC1114993262.9e-5681.82Show/hide
Query:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHD--
        MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+SRSHG+SSRRPP T T A GIM+RS YSGDK IKHHH D  
Subjt:  MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHD--

Query:  SPTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC
        +  +KGK GGAGS  SPRPTTRRYKLLKDVMC
Subjt:  SPTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein4.1e-3454.55Show/hide
Query:  LQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS---RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHH--HD
        ++ VCCMCGD+GF DKLF C  CR RFQHSYCSNYY + AEP E+CDWC+ + R  S   R  GSSS++P S+         RSEYS    IKH++  HD
Subjt:  LQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS---RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHH--HD

Query:  SPTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC
            KG  G  G  +SP+  TRRYKLLKDVMC
Subjt:  SPTEKGKHGGAGSTSSPRPTTRRYKLLKDVMC

AT3G60520.1 unknown protein1.1e-3154.17Show/hide
Query:  MVDLQ-IVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-TSRSH---GSSSRRPPSTGTNATGIMTRSEYSG-DKLIKH
        MVDL+  VCCMCGD+GF DKLFHC+KC NRFQHSYCS+YY E A+PI++CDWCQCE +S T   H   G SS+R             RSEYS     IK 
Subjt:  MVDLQ-IVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-TSRSH---GSSSRRPPSTGTNATGIMTRSEYSG-DKLIKH

Query:  HHHDSPT--------EKGKHGGAGSTSSPRPTTRRYKLLKDVMC
           +  T        +KGK G      SPRP TRRYKLLKDVMC
Subjt:  HHHDSPT--------EKGKHGGAGSTSSPRPTTRRYKLLKDVMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATCTTCAGATCGTTTGTTGCATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTCGCAACCGCTTCCAACATTCCTACTGCAGCAA
TTACTATAGTGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACATGGAAGCTCGTCCAGGAGACCGCCCTCCACTG
GTACAAACGCCACCGGAATCATGACCCGCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCCCACCGAGAAGGGGAAGCACGGCGGCGCCGGT
AGTACTTCGTCGCCCAGGCCGACGACGCGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTCTTTATATTTAAGTCTCTCTCTCTCTCTCTCTCTCTCATTTCTCCTTTTTCTCCTGTTTGGTAGTTCATCTTCATCATCTCATTAAGTTTCTTTTTTTCTTTTCA
TTTTTAGTTTGGTAAAATTACAATAACAATAATGGTGGATCTTCAGATCGTTTGTTGCATGTGTGGCGATATCGGTTTCCCCGACAAGCTCTTCCACTGTAACAAGTGTC
GCAACCGCTTCCAACATTCCTACTGCAGCAATTACTATAGTGAATCGGCGGAGCCAATAGAGGTGTGTGATTGGTGTCAGTGTGAAGGACGGAGCACCTCCAGATCACAT
GGAAGCTCGTCCAGGAGACCGCCCTCCACTGGTACAAACGCCACCGGAATCATGACCCGCTCCGAGTATTCCGGCGACAAATTAATCAAGCATCATCATCATGATTCTCC
CACCGAGAAGGGGAAGCACGGCGGCGCCGGTAGTACTTCGTCGCCCAGGCCGACGACGCGGAGGTACAAGCTTCTCAAGGACGTAATGTGCTGAAAAAAGGACGGTGTGA
GCTAAAACGCAGCGTTTTGGGGTTCGTTTTATTTTCTCTCGATATATATAGTTCTCTTTTTCTTATTCTCAA
Protein sequenceShow/hide protein sequence
MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTSRSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHDSPTEKGKHGGAG
STSSPRPTTRRYKLLKDVMC