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CSPI06G08760 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G08760
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAgglutinin domain-containing protein
Genome locationChr6:7366257..7366751
RNA-Seq ExpressionCSPI06G08760
SyntenyCSPI06G08760
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsIPR005830 - Aerolysin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN46563.1 hypothetical protein Csa_005179 [Cucumis sativus]7.9e-4598.96Show/hide
Query:  MGEYMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEV
        MGEYMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMT EAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEV
Subjt:  MGEYMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEV

XP_008458669.1 PREDICTED: uncharacterized protein LOC103497997 [Cucumis melo]6.0e-6981.37Show/hide
Query:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK
        Y E + AVDFQGAMNGSDEVN + F FSYEEEESQCWSSTVGMKLAYSMT EAGIP IM TNIV+SG+IS+SYTWGQTNKKSTPK +SYSLEVQPRTSVK
Subjt:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK

Query:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVKSLSTLPSN
        V+AM+TKGYCDVPFSYTQRD+LV+GQT  T+HDDGLFTG +CYNFHYQSE+V SLS   SN
Subjt:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVKSLSTLPSN

XP_008458670.1 PREDICTED: uncharacterized protein LOC103497999 [Cucumis melo]3.6e-2941.83Show/hide
Query:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK
        Y E ++    Q A N +    T     +Y +E +  W++T+ MKL + +    GIP I    I +SG+IS SY+WG+T  K T K SSY   V P+T VK
Subjt:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK

Query:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVK
        V+ + +KG CD+PFSY QRDV  +G   + +HDDG++TGL+CY+++Y+ E  K
Subjt:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVK

XP_022156054.1 uncharacterized protein LOC111023023 [Momordica charantia]2.7e-2942.38Show/hide
Query:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK
        Y E + A+    A+N ++E NT+  +FSY    +  WSST+  KL    T  AGIP I +  + IS + S  YTWG+T + +    +++++ V P T + 
Subjt:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK

Query:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSEN
        V+ + T+GYCDVPFSY QRDVL+NG+TV+  ++DGL+TG +CYNF Y++++
Subjt:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSEN

XP_023521953.1 uncharacterized protein LOC111785802 [Cucurbita pepo subsp. pepo]4.0e-2845.65Show/hide
Query:  AMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVKVNAMVTKGYCDV
        A N S + NT+  K  YE  ES  WSSTV  KL    T + GIP I +  I +S + S  YTWG+T  KS+   + Y++ V P + V+V+ + TKG CDV
Subjt:  AMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVKVNAMVTKGYCDV

Query:  PFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSE
        P+SYTQRD L+NG  V   +DDG++T ++CYNF Y+++
Subjt:  PFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSE

TrEMBL top hitse value%identityAlignment
A0A0A0KAR2 Uncharacterized protein3.8e-4598.96Show/hide
Query:  MGEYMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEV
        MGEYMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMT EAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEV
Subjt:  MGEYMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEV

A0A1S3C8I1 uncharacterized protein LOC1034979972.9e-6981.37Show/hide
Query:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK
        Y E + AVDFQGAMNGSDEVN + F FSYEEEESQCWSSTVGMKLAYSMT EAGIP IM TNIV+SG+IS+SYTWGQTNKKSTPK +SYSLEVQPRTSVK
Subjt:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK

Query:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVKSLSTLPSN
        V+AM+TKGYCDVPFSYTQRD+LV+GQT  T+HDDGLFTG +CYNFHYQSE+V SLS   SN
Subjt:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVKSLSTLPSN

A0A5D3DM96 Agglutinin domain-containing protein1.7e-2941.83Show/hide
Query:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK
        Y E ++    Q A N +    T     +Y +E +  W++T+ MKL + +    GIP I    I +SG+IS SY+WG+T  K T K SSY   V P+T VK
Subjt:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK

Query:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVK
        V+ + +KG CD+PFSY QRDV  +G   + +HDDG++TGL+CY+++Y+ E  K
Subjt:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVK

A0A5D3DML5 Agglutinin domain-containing protein2.9e-6981.37Show/hide
Query:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK
        Y E + AVDFQGAMNGSDEVN + F FSYEEEESQCWSSTVGMKLAYSMT EAGIP IM TNIV+SG+IS+SYTWGQTNKKSTPK +SYSLEVQPRTSVK
Subjt:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK

Query:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVKSLSTLPSN
        V+AM+TKGYCDVPFSYTQRD+LV+GQT  T+HDDGLFTG +CYNFHYQSE+V SLS   SN
Subjt:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVKSLSTLPSN

A0A6J1DS59 uncharacterized protein LOC1110230231.3e-2942.38Show/hide
Query:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK
        Y E + A+    A+N ++E NT+  +FSY    +  WSST+  KL    T  AGIP I +  + IS + S  YTWG+T + +    +++++ V P T + 
Subjt:  YMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVK

Query:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSEN
        V+ + T+GYCDVPFSY QRDVL+NG+TV+  ++DGL+TG +CYNF Y++++
Subjt:  VNAMVTKGYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAATATATGGAGAGAGTAAAGGCTGTGGATTTTCAAGGAGCCATGAATGGGAGCGATGAAGTGAATACAGTGAAGTTTAAGTTTTCTTATGAGGAGGAAGAAAG
TCAGTGTTGGAGCTCAACAGTTGGAATGAAATTGGCTTATTCAATGACAACAGAAGCTGGAATTCCATTCATTATGAAGACAAATATTGTAATATCAGGGGATATTTCAG
ATTCTTACACATGGGGACAAACCAATAAGAAATCAACTCCTAAAACATCTTCATATTCACTTGAAGTACAGCCAAGAACTTCAGTCAAAGTGAATGCCATGGTAACCAAA
GGATATTGTGATGTTCCATTCTCATACACTCAACGTGATGTTCTTGTCAATGGACAAACAGTACTTACAGATCATGATGATGGTTTATTCACAGGACTTAGTTGCTACAA
CTTCCACTATCAATCTGAAAATGTTAAATCCTTATCCACTTTACCATCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAATATATGGAGAGAGTAAAGGCTGTGGATTTTCAAGGAGCCATGAATGGGAGCGATGAAGTGAATACAGTGAAGTTTAAGTTTTCTTATGAGGAGGAAGAAAG
TCAGTGTTGGAGCTCAACAGTTGGAATGAAATTGGCTTATTCAATGACAACAGAAGCTGGAATTCCATTCATTATGAAGACAAATATTGTAATATCAGGGGATATTTCAG
ATTCTTACACATGGGGACAAACCAATAAGAAATCAACTCCTAAAACATCTTCATATTCACTTGAAGTACAGCCAAGAACTTCAGTCAAAGTGAATGCCATGGTAACCAAA
GGATATTGTGATGTTCCATTCTCATACACTCAACGTGATGTTCTTGTCAATGGACAAACAGTACTTACAGATCATGATGATGGTTTATTCACAGGACTTAGTTGCTACAA
CTTCCACTATCAATCTGAAAATGTTAAATCCTTATCCACTTTACCATCTAATTAA
Protein sequenceShow/hide protein sequence
MGEYMERVKAVDFQGAMNGSDEVNTVKFKFSYEEEESQCWSSTVGMKLAYSMTTEAGIPFIMKTNIVISGDISDSYTWGQTNKKSTPKTSSYSLEVQPRTSVKVNAMVTK
GYCDVPFSYTQRDVLVNGQTVLTDHDDGLFTGLSCYNFHYQSENVKSLSTLPSN