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CSPI06G08960 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G08960
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionpatellin-1-like
Genome locationChr6:7528239..7529339
RNA-Seq ExpressionCSPI06G08960
SyntenyCSPI06G08960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053292.1 patellin-1-like [Cucumis melo var. makuwa]2.0e-3984.62Show/hide
Query:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK
        MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+EETETPVE ETKEVVVEEE+KEEKN EEEVVEEEEKEE K
Subjt:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK

Query:  TEEAAEVVVEEETKA-----PV-EEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE
        TEEAAE  V EETKA     PV EE EEKAVEVV+EKP EE EEK EEEVEAEK E
Subjt:  TEEAAEVVVEEETKA-----PV-EEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE

KAG6604898.1 hypothetical protein SDJN03_02215, partial [Cucurbita argyrosperma subsp. sororia]5.6e-0555.88Show/hide
Query:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEV----------
        MATAEVVT E AL EE T   EV+VPP KVEEE    P   DPPAEE+AKEE      A E  E PVEVETKEVV EEE +EE+ +EE V          
Subjt:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEV----------

Query:  VEEEEKEENKTEE------AAEVVVEEETKAPVE---EAEEKAVEVVDEKPAEEAEEK-AEEEVEAEKVE
        VE EEKEE   E       AAE   EEE +A  E    AEE+AVE V E  AEEAEEK AEEE  AEK E
Subjt:  VEEEEKEENKTEE------AAEVVVEEETKAPVE---EAEEKAVEVVDEKPAEEAEEK-AEEEVEAEKVE

XP_004140479.1 cilia- and flagella-associated protein 251 [Cucumis sativus]1.7e-4996.67Show/hide
Query:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK
        MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEE ETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK
Subjt:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK

Query:  TEEAAEVVVEEETKAPVEEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE
        TEEAAEVVVEEETKAPVEEAEEKAVEV   KPAEEAEEKAEEEV AEKVE
Subjt:  TEEAAEVVVEEETKAPVEEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE

XP_008455963.1 PREDICTED: patellin-1-like [Cucumis melo]2.0e-3984.62Show/hide
Query:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK
        MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+EETETPVE ETKEVVVEEE+KEEKN EEEVVEEEEKEE K
Subjt:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK

Query:  TEEAAEVVVEEETKA-----PV-EEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE
        TEEAAE  V EETKA     PV EE EEKAVEVV+EKP EE EEK EEEVEAEK E
Subjt:  TEEAAEVVVEEETKA-----PV-EEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE

XP_038900947.1 cytochrome c1-like [Benincasa hispida]7.3e-2973.68Show/hide
Query:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK
        MATAEVV PET LPEEATEV  VEVPPPKVEEEEAPPP   DPPAEEVAKEE+ TDPPA EETETPVEVETKEVVVEEE KEEK EEEE          K
Subjt:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK

Query:  TEEAAEVVVEEETKAPVEE--AEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE
         EEA E VVEEE+K    E  AEE+AVEVV+EKP EE EEK EEE  AEK E
Subjt:  TEEAAEVVVEEETKAPVEE--AEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE

TrEMBL top hitse value%identityAlignment
A0A0A0KAS3 Uncharacterized protein8.1e-5096.67Show/hide
Query:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK
        MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEE ETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK
Subjt:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK

Query:  TEEAAEVVVEEETKAPVEEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE
        TEEAAEVVVEEETKAPVEEAEEKAVEV   KPAEEAEEKAEEEV AEKVE
Subjt:  TEEAAEVVVEEETKAPVEEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE

A0A1S3C239 patellin-1-like9.9e-4084.62Show/hide
Query:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK
        MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+EETETPVE ETKEVVVEEE+KEEKN EEEVVEEEEKEE K
Subjt:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK

Query:  TEEAAEVVVEEETKA-----PV-EEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE
        TEEAAE  V EETKA     PV EE EEKAVEVV+EKP EE EEK EEEVEAEK E
Subjt:  TEEAAEVVVEEETKA-----PV-EEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE

A0A5A7UC23 Patellin-1-like9.9e-4084.62Show/hide
Query:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK
        MATAEVVTP+TA+PEEATEVVEVEVP PKVEEEEAPPPVE DPPAEEVAKEEDVTDPPA+EETETPVE ETKEVVVEEE+KEEKN EEEVVEEEEKEE K
Subjt:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENK

Query:  TEEAAEVVVEEETKA-----PV-EEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE
        TEEAAE  V EETKA     PV EE EEKAVEVV+EKP EE EEK EEEVEAEK E
Subjt:  TEEAAEVVVEEETKA-----PV-EEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE

A0A6J1G7J6 enolase-phosphatase E1-like8.7e-0455.49Show/hide
Query:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEE-----EEV----V
        MATAEVVT E AL EE T   EVEVPP KVEEE          PAEEVAKEE      A E  E PV VETKEVV EEE +EE  EE     +EV    V
Subjt:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEE-----EEV----V

Query:  EEEEKEENKTEEAAEVVVEEETKAPVEE----AEEKAVEVVDEKPAEEAEEK-AEEEVEAEKVE
        E EEKEE   E    V  EEE +    E    AEE+AVE V E  AEEAEEK AEEE  AEK E
Subjt:  EEEEKEENKTEEAAEVVVEEETKAPVEE----AEEKAVEVVDEKPAEEAEEK-AEEEVEAEKVE

A0A6J1I4V1 fibrous sheath CABYR-binding protein-like4.6e-0555.49Show/hide
Query:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVV---EEEAKEEKNEEEEVVEEEEKE
        MATAEVVT E AL EE T   EVEVPP KVEEE    P   DPPAEEVAKEE      A E  E PVEVETKEVV    EEEAKEE  EE++ VE  E E
Subjt:  MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVV---EEEAKEEKNEEEEVVEEEEKE

Query:  ENKTEEA----------AEVVVEEETKAPVEEAEEKAVEVVDEKPAEEAEEK-AEEEVEAEKVE
          + EEA           E   EEE K   E A E+    V E  AEEAEEK AEEE  AEK E
Subjt:  ENKTEEA----------AEVVVEEETKAPVEEAEEKAVEVVDEKPAEEAEEK-AEEEVEAEKVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGCTGAGGTTGTAACACCGGAGACAGCTCTCCCAGAGGAAGCAACAGAGGTGGTGGAGGTGGAGGTACCACCGCCCAAGGTTGAGGAAGAAGAAGCTCCGCC
TCCGGTGGAAGAAGATCCGCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCAGTGGAAGAGACAGAAACTCCGGTTGAAGTTGAAACCAAGGAAG
TAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAATGAAGAAGAAGAAGTAGTAGAAGAAGAGGAAAAGGAAGAGAATAAAACAGAAGAGGCAGCTGAGGTTGTGGTGGAG
GAAGAGACGAAAGCACCGGTGGAGGAGGCAGAGGAGAAGGCCGTGGAAGTGGTGGACGAGAAGCCTGCAGAAGAAGCAGAAGAGAAGGCAGAAGAAGAGGTTGAAGCAGA
GAAGGTTGAGTAA
mRNA sequenceShow/hide mRNA sequence
CTCAAATCATCTTTTACACACTGCCACTCCATTCTTTCTCTGTCCTATAAAATCCACTCTGCTTCGTCATTCTTCCATCCCATCCTTTCTTTCTCTTCTTCAATTCCTTC
TCCTTTTCCACAAGGATTTAGCAATGGCTACTGCTGAGGTTGTAACACCGGAGACAGCTCTCCCAGAGGAAGCAACAGAGGTGGTGGAGGTGGAGGTACCACCGCCCAAG
GTTGAGGAAGAAGAAGCTCCGCCTCCGGTGGAAGAAGATCCGCCAGCGGAGGAGGTGGCAAAAGAAGAAGACGTCACGGATCCACCAGCAGTGGAAGAGACAGAAACTCC
GGTTGAAGTTGAAACCAAGGAAGTAGTAGTAGAAGAAGAGGCAAAGGAAGAGAAGAATGAAGAAGAAGAAGTAGTAGAAGAAGAGGAAAAGGAAGAGAATAAAACAGAAG
AGGCAGCTGAGGTTGTGGTGGAGGAAGAGACGAAAGCACCGGTGGAGGAGGCAGAGGAGAAGGCCGTGGAAGTGGTGGACGAGAAGCCTGCAGAAGAAGCAGAAGAGAAG
GCAGAAGAAGAGGTTGAAGCAGAGAAGGTTGAGTAATTAAAACCTGAATACATATTATTGGGTGTAATATGAAAAAAGTGAATGGAGGGTGGTTTGAGAAATTTGGTAAC
TTTAAATTGTAGAGCGTTTTGTTTTTGTGATATGAAAAGTGGTTGATTGAATGGGGATTGGAATGGAGTGTAGTAAGCTATAAAAGGAGTATAGGGATTGGGGAACTTTG
TATTTCTGTTTCTTGGATGTCTGTTCACAGTTGCAAATTTTTTCTTTTTTGCTAGTTTGTTTATTATAATAACTTGCAAGTTATAATATCTATATATATATATACTTGTT
TCTTTTTTTAAAAAAACAATATATTATTATTT
Protein sequenceShow/hide protein sequence
MATAEVVTPETALPEEATEVVEVEVPPPKVEEEEAPPPVEEDPPAEEVAKEEDVTDPPAVEETETPVEVETKEVVVEEEAKEEKNEEEEVVEEEEKEENKTEEAAEVVVE
EETKAPVEEAEEKAVEVVDEKPAEEAEEKAEEEVEAEKVE