CuGenDBv2

Gene ID	CSPI06G09280
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	WW domain-binding protein 11
Genome location	Chr6:7866659..7867120
RNA-Seq Expression	CSPI06G09280
Synteny	CSPI06G09280
Gene Ontology terms	GO:0045292 - mRNA cis splicing, via spliceosome (biological process) GO:0005681 - spliceosomal complex (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004152447.1 protein EARLY FLOWERING 5 isoform X1 [Cucumis sativus]

1.3e-15

81.03

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Query:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL
        MFKSSIGP+VPL DA TSG   SLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Subjt:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL

XP_008437712.1 PREDICTED: WW domain-binding protein 11 isoform X1 [Cucumis melo]

3.3e-16

82.76

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Query:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL
        MFKSSIGP+VPL DA TSG  SSLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Subjt:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL

XP_008437718.1 PREDICTED: basic proline-rich protein isoform X2 [Cucumis melo]

3.3e-16

82.76

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Query:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL
        MFKSSIGP+VPL DA TSG  SSLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Subjt:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL

XP_011651256.1 protein EARLY FLOWERING 5 isoform X2 [Cucumis sativus]

1.3e-15

81.03

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Query:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL
        MFKSSIGP+VPL DA TSG   SLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Subjt:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL

XP_038895102.1 protein EARLY FLOWERING 5 [Benincasa hispida]

1.6e-15

81.03

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Query:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL
        MFKSSIGP+VPL DA TSGV SS NME +DVP AVPPPPPP PLPDS KLGS DGPAL
Subjt:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQR9 Uncharacterized protein

6.1e-16

81.03

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Query:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL
        MFKSSIGP+VPL DA TSG   SLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Subjt:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL

A0A1S3AV89 basic proline-rich protein isoform X2

1.6e-16

82.76

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Query:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL
        MFKSSIGP+VPL DA TSG  SSLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Subjt:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL

A0A1S3AV96 WW domain-binding protein 11 isoform X1

1.6e-16

82.76

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Query:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL
        MFKSSIGP+VPL DA TSG  SSLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Subjt:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL

A0A5D3BJ39 WW domain-binding protein 11 isoform X1

1.6e-16

82.76

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Query:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL
        MFKSSIGP+VPL DA TSG  SSLNME +DVP AVPPPPPP PLPDSAKLGS DGPAL
Subjt:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL

A0A6J1C761 WW domain-binding protein 11

2.3e-15

77.59

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Query:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL
        MFKSSIGP+VPL DA TSG  SS NME +DVP +VPPPPPP PLPDSAK+GS DGPAL
Subjt:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL

SwissProt top hits

e value

%identity

Alignment

G3CHK5 Protein EARLY FLOWERING 5

2.1e-05

51.72

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Query:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL
        M+ SSIGP++PL    +S   SS   E  DV  A+P PPPP PLPDS +LGS DG  +
Subjt:  MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPAL

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTTTAAATCTTCAATTGGACCACAAGTTCCTCTATATGATGCTTGTACTAGTGGTGTTGTATCATCCTTGAATATGGAGCTGAAGGATGTTCCCTCGGCTGTACCTCC
ACCTCCCCCACCAACTCCTTTGCCAGACTCTGCTAAGTTGGGTTCTGTTGATGGTCCTGCTCTACGATTTCTTACTTTTACCTCCTCCACCTCCATTGGCACCTATGCCT
GTAGCATCAAACTTGGGTTTACCATTACTTCCACCACCTCCTGGACGTCCACCAAGAGAACAAGTGGTAGGCCGCCCTCCTTTTTTGTTGCTTCCATCTTTGCAGCAGTC
TACAATGATGCTCCTGTCTGGAAGCAGTGA

mRNA sequence

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Protein sequence

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MFKSSIGPQVPLYDACTSGVVSSLNMELKDVPSAVPPPPPPTPLPDSAKLGSVDGPALRFLTFTSSTSIGTYACSIKLGFTITSTTSWTSTKRTSGRPPSFFVASIFAAV
YNDAPVWKQ

CSPI06G09280 (gene) of Cucumber (PI 183967) v1 genome