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CSPI06G09520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G09520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRING-type domain-containing protein
Genome locationChr6:8125779..8126854
RNA-Seq ExpressionCSPI06G09520
SyntenyCSPI06G09520
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047798.1 RING-H2 finger protein ATL18-like [Cucumis melo var. makuwa]8.8e-7291.1Show/hide
Query:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDED-GGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCI
        MLGLF+L+SPMRFPILFF+TFLWIPLFR+ QAILGVVATVFGLPSSP+HGTDL+VVRSYDED GGSSEEICSICLTEFGRS DSVCKLPNCEHLFHFNCI
Subjt:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDED-GGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCI

Query:  QEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ
        QEWIDRNRFTCPLCRC FF EDN KMDTKW FLVPDNPSSLYYFLQ
Subjt:  QEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ

KAG7010790.1 RING-H2 finger protein ATL18, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-3958.82Show/hide
Query:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTD---LLVVRSYDE-----DGGSSEEICSICLTEFGRSGDSVCKLPNCEH
        MLGL +L S +   I+FFNTF+WIPLFR+ +AILG +A+VF L S PE  +     L+VR Y+E     D    EE+CSICLTEF R  DSVCKLP+C H
Subjt:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTD---LLVVRSYDE-----DGGSSEEICSICLTEFGRSGDSVCKLPNCEH

Query:  LFHFNCIQEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ
        +FHF+CI++W +RNRFTCPLCRCFF  E +   + K  F+VPDNPSSLYYFLQ
Subjt:  LFHFNCIQEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ

TYK01060.1 RING-H2 finger protein ATL18-like [Cucumis melo var. makuwa]4.4e-7190.41Show/hide
Query:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDED-GGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCI
        MLGLF+L+SPMRFPILFF+TFLWIPLFR+ QAILGVVATVFG PSSP+HGTDL+VVRSYDED GGSSEEICSICLTEFGRS DSVCKLPNCEHLFHFNCI
Subjt:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDED-GGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCI

Query:  QEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ
        QEWIDRNRFTCPLCRC FF EDN KMDTKW FLVPDNPSSLYYFLQ
Subjt:  QEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ

XP_022944066.1 RING-H2 finger protein ATL18-like [Cucurbita moschata]2.0e-3959.48Show/hide
Query:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTD---LLVVRSYDE-----DGGSSEEICSICLTEFGRSGDSVCKLPNCEH
        MLGL +L S +   I+FFNTF+WIPLFR+ +AILG VA+VF L S PE  +     L+VR Y+E     D    EE+CSICLTEF R  DSVCKLP+C H
Subjt:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTD---LLVVRSYDE-----DGGSSEEICSICLTEFGRSGDSVCKLPNCEH

Query:  LFHFNCIQEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ
        +FHF+CI++W +RNRFTCPLCRCFF  E +   + K  F+VPDNPSSLYYFLQ
Subjt:  LFHFNCIQEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ

XP_023512248.1 RING-H2 finger protein ATL18-like [Cucurbita pepo subsp. pepo]2.6e-3959.48Show/hide
Query:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTD---LLVVRSYDE-----DGGSSEEICSICLTEFGRSGDSVCKLPNCEH
        MLGL +L S +   I+FFNTF+WIPLFR+ +AILG VA+VF L S PE  +     L+VR Y+E     D    EE+CSICLTEF R  DSVCKLP+C H
Subjt:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTD---LLVVRSYDE-----DGGSSEEICSICLTEFGRSGDSVCKLPNCEH

Query:  LFHFNCIQEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ
        +FHF+CI++W +RNRFTCPLCRCFF  E +   + K  F+VPDNPSSLYYFLQ
Subjt:  LFHFNCIQEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ

TrEMBL top hitse value%identityAlignment
A0A0A0KFW5 RING-type domain-containing protein2.8e-76100Show/hide
Query:  MRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNRFTC
        MRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNRFTC
Subjt:  MRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNRFTC

Query:  PLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ
        PLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ
Subjt:  PLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ

A0A5A7TXY0 RING-H2 finger protein ATL18-like4.3e-7291.1Show/hide
Query:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDED-GGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCI
        MLGLF+L+SPMRFPILFF+TFLWIPLFR+ QAILGVVATVFGLPSSP+HGTDL+VVRSYDED GGSSEEICSICLTEFGRS DSVCKLPNCEHLFHFNCI
Subjt:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDED-GGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCI

Query:  QEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ
        QEWIDRNRFTCPLCRC FF EDN KMDTKW FLVPDNPSSLYYFLQ
Subjt:  QEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ

A0A5D3BPT9 RING-H2 finger protein ATL18-like2.1e-7190.41Show/hide
Query:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDED-GGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCI
        MLGLF+L+SPMRFPILFF+TFLWIPLFR+ QAILGVVATVFG PSSP+HGTDL+VVRSYDED GGSSEEICSICLTEFGRS DSVCKLPNCEHLFHFNCI
Subjt:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDED-GGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCI

Query:  QEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ
        QEWIDRNRFTCPLCRC FF EDN KMDTKW FLVPDNPSSLYYFLQ
Subjt:  QEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ

A0A6J1FTE6 RING-H2 finger protein ATL18-like9.6e-4059.48Show/hide
Query:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTD---LLVVRSYDE-----DGGSSEEICSICLTEFGRSGDSVCKLPNCEH
        MLGL +L S +   I+FFNTF+WIPLFR+ +AILG VA+VF L S PE  +     L+VR Y+E     D    EE+CSICLTEF R  DSVCKLP+C H
Subjt:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTD---LLVVRSYDE-----DGGSSEEICSICLTEFGRSGDSVCKLPNCEH

Query:  LFHFNCIQEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ
        +FHF+CI++W +RNRFTCPLCRCFF  E +   + K  F+VPDNPSSLYYFLQ
Subjt:  LFHFNCIQEWIDRNRFTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ

A0A6J1G855 E3 ubiquitin-protein ligase ATL41-like1.7e-3657.97Show/hide
Query:  ILFFNTFLWIPLFRINQAILGVVATVFGL---PSSPEHGTDLLVVRSYDE----DGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNR
        I FFNT++WIPL R+  AI+G V +VF L   P S       L+VR Y+E    D  + EEICSICL EF R GDSVC LP+C H+FHF+CI++W++RNR
Subjt:  ILFFNTFLWIPLFRINQAILGVVATVFGL---PSSPEHGTDLLVVRSYDE----DGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNR

Query:  FTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ
        FTCPLCRCFFFF    + + K  F+VPDNPS LYYFLQ
Subjt:  FTCPLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ

SwissProt top hitse value%identityAlignment
Q8GW38 RING-H2 finger protein ATL479.3e-0845.59Show/hide
Query:  DLLVVRSYDEDGGSSEEI-CSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFFF
        D L V  Y E  G+ E   C++CL EF    D +  LPNC H FH +CI  W+  N  TCPLCR   F
Subjt:  DLLVVRSYDEDGGSSEEI-CSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFFF

Q9SUS4 Probable E3 ubiquitin-protein ligase RHA1A3.2e-0831.58Show/hide
Query:  FLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWI-DRNRFTCPLCR
        ++ +P F  +        T   L +S     +L+ V  + +     E+ C++CL++F  S D V +LP C H+FH  C+  WI D N+  CP+CR
Subjt:  FLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWI-DRNRFTCPLCR

Q9SUS5 E3 ubiquitin-protein ligase RHA1B1.1e-0835.71Show/hide
Query:  TVFGLPSSPEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWI-DRNRFTCPLCRCFFFFED
        T   L +S     +L+ V  + +     E+ C++CL++F  S D + +LP C H+FH  C+  WI D N+ TCP+CR  F  E+
Subjt:  TVFGLPSSPEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWI-DRNRFTCPLCRCFFFFED

Q9SZL4 RING-H2 finger protein ATL182.6e-1036.75Show/hide
Query:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDEDGGSSEEI-CSICLTEFGRSGDSVCKLPNCEHLFHFNCI
        M+ + +  SP+    + F T + IPL R+ +             +  + G +L+ V   D++    EEI C ICL EF  + D+V  LP C HLFH NCI
Subjt:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDEDGGSSEEI-CSICLTEFGRSGDSVCKLPNCEHLFHFNCI

Query:  QEWIDRNRFTCPLCRCF
        + W+ R   TCPLCR F
Subjt:  QEWIDRNRFTCPLCRCF

Q9XF92 Brassinosteroid-responsive RING protein 12.1e-0737.68Show/hide
Query:  DLLVVRSYDEDGGSSEEI---CSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFF
        ++L V  ++E   S E++   C++CL EF      +  L NC H+FH +C+  W+D ++ TCPLCR  F
Subjt:  DLLVVRSYDEDGGSSEEI---CSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFF

Arabidopsis top hitse value%identityAlignment
AT4G11360.1 RING-H2 finger A1B7.8e-1035.71Show/hide
Query:  TVFGLPSSPEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWI-DRNRFTCPLCRCFFFFED
        T   L +S     +L+ V  + +     E+ C++CL++F  S D + +LP C H+FH  C+  WI D N+ TCP+CR  F  E+
Subjt:  TVFGLPSSPEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWI-DRNRFTCPLCRCFFFFED

AT4G38140.1 RING/U-box superfamily protein1.9e-1136.75Show/hide
Query:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDEDGGSSEEI-CSICLTEFGRSGDSVCKLPNCEHLFHFNCI
        M+ + +  SP+    + F T + IPL R+ +             +  + G +L+ V   D++    EEI C ICL EF  + D+V  LP C HLFH NCI
Subjt:  MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDEDGGSSEEI-CSICLTEFGRSGDSVCKLPNCEHLFHFNCI

Query:  QEWIDRNRFTCPLCRCF
        + W+ R   TCPLCR F
Subjt:  QEWIDRNRFTCPLCRCF

AT5G37250.1 RING/U-box superfamily protein1.2e-1051.67Show/hide
Query:  GGSSEEICSICLTEFGRS-GDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFFFFED
        G   E  CSICL +F  S  D++  LP+C HLFH NCI EW+ R R +CPLCR   + ED
Subjt:  GGSSEEICSICLTEFGRS-GDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFFFFED

AT5G37270.1 RING/U-box superfamily protein4.6e-1050Show/hide
Query:  GGSSEEICSICLTEFGRS-GDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFFFFED
        G   E  CSICL +F  S  D++  LP+C HLFH +CI EW+ R R +CPLCR   + ED
Subjt:  GGSSEEICSICLTEFGRS-GDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCRCFFFFED

AT5G43200.1 Zinc finger, C3HC4 type (RING finger) family protein1.0e-0942.65Show/hide
Query:  PEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCR
        P   TDL    S  E+     + C+ICL E   S D  C+LPNC H FH  C+ +W+ R   +CPLCR
Subjt:  PEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNRFTCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTTTGTTTTGGCTCCTTTCCCCTATGCGATTCCCCATCCTTTTCTTCAACACTTTCCTCTGGATTCCGCTTTTTCGTATCAATCAAGCCATTCTGGGCGTGGT
GGCTACTGTTTTTGGCCTGCCCTCCTCCCCAGAACATGGAACTGACCTTCTGGTGGTGAGGTCATACGATGAGGATGGAGGATCCTCAGAGGAGATTTGCTCCATCTGTT
TGACAGAGTTTGGTAGATCAGGAGATTCGGTGTGTAAGTTACCGAATTGTGAGCATTTATTTCATTTCAATTGCATCCAGGAATGGATCGACAGGAATCGCTTCACTTGT
CCCCTCTGTAGATGCTTCTTCTTCTTCGAAGACAACCGCAAGATGGACACCAAGTGGAGCTTCCTCGTCCCTGACAATCCCTCCTCTCTCTATTACTTCCTGCAGTGA
mRNA sequenceShow/hide mRNA sequence
CGTCCTGATCAAAGATAGTGGAGGGGGAGGAAGGAAAGAGGTAATGCAAAAGAATTCCCACCCACATGGAATGGGAAAGGGGTAGAAAGGATAAGAGGATGGATGAAGGT
CTTTTATTTTGGTTGTTAATTAATATGAGTGATTTCTTTTATAACTGTGTCAATCAAAGTTGGGTATCAATATATGAATGTGAAGACAACCACTTTAATTTGGCCCAAAG
AACTCAACACTCCTTCATATCAATCTATACTGATCCCAATTATTATATCTATATATAATGGGGATCCAAATCCAGTTCCCTTTTCATATCAATCAACTCCCACCTAAACT
CTCTCTCTCTCTCCCTCTGTGTGTGTGTTAAAATGTTGGGTTTGTTTTGGCTCCTTTCCCCTATGCGATTCCCCATCCTTTTCTTCAACACTTTCCTCTGGATTCCGCTT
TTTCGTATCAATCAAGCCATTCTGGGCGTGGTGGCTACTGTTTTTGGCCTGCCCTCCTCCCCAGAACATGGAACTGACCTTCTGGTGGTGAGGTCATACGATGAGGATGG
AGGATCCTCAGAGGAGATTTGCTCCATCTGTTTGACAGAGTTTGGTAGATCAGGAGATTCGGTGTGTAAGTTACCGAATTGTGAGCATTTATTTCATTTCAATTGCATCC
AGGAATGGATCGACAGGAATCGCTTCACTTGTCCCCTCTGTAGATGCTTCTTCTTCTTCGAAGACAACCGCAAGATGGACACCAAGTGGAGCTTCCTCGTCCCTGACAAT
CCCTCCTCTCTCTATTACTTCCTGCAGTGATTTGATGATCATCATCTGTACATTTTTTTTTTTTTTTTGATTTGGAAATTTGTAGTTCTTCAATCTCCATTCTTTTCTGT
GTAAATGTCTATCCAATAATCAGCTGCATATACAAAAAACCTTCCTTCTTCAAATGCAAAACTCTCTTTCTTCTCATAATTCATTTCCAAATTCATCATATTCATCTTCT
ACACTGCGCAAACTCATCGGTCCTTTCATTAATTACTTCTAATCAATAATATACTTTACATTTCTAATTAACATAACTGTAATAAT
Protein sequenceShow/hide protein sequence
MLGLFWLLSPMRFPILFFNTFLWIPLFRINQAILGVVATVFGLPSSPEHGTDLLVVRSYDEDGGSSEEICSICLTEFGRSGDSVCKLPNCEHLFHFNCIQEWIDRNRFTC
PLCRCFFFFEDNRKMDTKWSFLVPDNPSSLYYFLQ