; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G09780 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G09780
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationChr6:8402006..8403183
RNA-Seq ExpressionCSPI06G09780
SyntenyCSPI06G09780
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637561.1 hypothetical protein CSA_017659 [Cucumis sativus]4.8e-18093.58Show/hide
Query:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY
        MEY LEVNSLTT  IVDMEVIDKEVNQDEELQKTIKELKQNP+GISKF WENGKL YKKRVVLSK SSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY
Subjt:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY

Query:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG
        WEGMKADIKKYVEQCEICQRNKYEAT+PAGVLHP+P P+AILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKI+SKHG
Subjt:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG

Query:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI
        VPKSI+SDRD+VFISHFW ELF TMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQ+WH+FI WAELWYNTTFHSSIRSNPFKIVYGRQPPPI
Subjt:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI

Query:  LSYGTRKTQNDEVEIMLKERDLALNAL
        LSYGT+KTQNDEVE+MLKERDLALNAL
Subjt:  LSYGTRKTQNDEVEIMLKERDLALNAL

KGN62557.2 hypothetical protein Csa_018739 [Cucumis sativus]4.2e-15275.84Show/hide
Query:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY
        +E P+E+ +++TT IV+MEV++KEV  DEEL+  I+ELKQNP+  SKF W NG L+YKKR+VLSK+S++IPTLLHTFHDSILGGHSGFLRTYKRM GELY
Subjt:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY

Query:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG
        W+GMKAD+KKYV++CE+CQRNK EAT+PAGVL P+P PE ILE+WSMDFIEGLPKAGGMNVIMV+VDRLSKY+YFITM+HPF A+QVA  FI++++S+HG
Subjt:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG

Query:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI
        +PKSI+SDRDK+FIS+FWKE+F +MGT LKRSTAFHPQTDGQTERVN+C+ETYLRCFCNEQP +W+KFIPWAELWYNTTFH+S RSNPF+IVYGR PPP+
Subjt:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI

Query:  LSYGTRKTQNDEVEIMLKERDLALNAL
        LSYG  KT ++EVE+MLKERDLAL AL
Subjt:  LSYGTRKTQNDEVEIMLKERDLALNAL

TYJ96663.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.8e-14875.84Show/hide
Query:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY
        M++ +E+ +L+TT IVDMEV+ KEV +DEELQ  I++L+ NP    K+   NG L YK RVVLSK SS+IP+LLHTFHDSILGGHSGFLRTYKRMSGEL+
Subjt:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY

Query:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG
        W+GMK DIKKYVEQCEICQRNK EAT+PAGVL PLP P+ ILE+W+MDFIEGLPKAGGMNVIMVVVDRLSKYAYF+TMKHPF+AKQVA  FI+KI+ +HG
Subjt:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG

Query:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI
        +PKSI+SDRDK+F+S+FWKELF  M T LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQP +WH+FIPWAELWYNTTFHSS R+ PF+ VYGR PPP+
Subjt:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI

Query:  LSYGTRKTQNDEVEIMLKERDLALNAL
        +SYG +KT NDEVE +LKERDLA++AL
Subjt:  LSYGTRKTQNDEVEIMLKERDLALNAL

TYK21035.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.8e-14875.84Show/hide
Query:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY
        M++ +E+ +L+TT IVDMEV+ KEV +DEELQ  I++L+ NP    K+   NG L YK RVVLSK SS+IP+LLHTFHDSILGGHSGFLRTYKRMSGEL+
Subjt:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY

Query:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG
        W+GMK DIKKYVEQCEICQRNK EAT+PAGVL PLP P+ ILE+W+MDFIEGLPKAGGMNVIMVVVDRLSKYAYF+TMKHPF+AKQVA  FI+KI+ +HG
Subjt:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG

Query:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI
        +PKSI+SDRDK+F+S+FWKELF  M T LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQP +WH+FIPWAELWYNTTFHSS R+ PF+ VYGR PPP+
Subjt:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI

Query:  LSYGTRKTQNDEVEIMLKERDLALNAL
        +SYG +KT NDEVE +LKERDLA++AL
Subjt:  LSYGTRKTQNDEVEIMLKERDLALNAL

TYK28944.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.8e-14875.84Show/hide
Query:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY
        M++ +E+ +L+TT IVDMEV+ KEV +DEELQ  I++L+ NP    K+   NG L YK RVVLSK SS+IP+LLHTFHDSILGGHSGFLRTYKRMSGEL+
Subjt:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY

Query:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG
        W+GMK DIKKYVEQCEICQRNK EAT+PAGVL PLP P+ ILE+W+MDFIEGLPKAGGMNVIMVVVDRLSKYAYF+TMKHPF+AKQVA  FI+KI+ +HG
Subjt:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG

Query:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI
        +PKSI+SDRDK+F+S+FWKELF  M T LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQP +WH+FIPWAELWYNTTFHSS R+ PF+ VYGR PPP+
Subjt:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI

Query:  LSYGTRKTQNDEVEIMLKERDLALNAL
        +SYG +KT NDEVE +LKERDLA++AL
Subjt:  LSYGTRKTQNDEVEIMLKERDLALNAL

TrEMBL top hitse value%identityAlignment
A0A5D3BBH7 Ty3/gypsy retrotransposon protein1.4e-14875.84Show/hide
Query:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY
        M++ +E+ +L+TT IVDMEV+ KEV +DEELQ  I++L+ NP    K+   NG L YK RVVLSK SS+IP+LLHTFHDSILGGHSGFLRTYKRMSGEL+
Subjt:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY

Query:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG
        W+GMK DIKKYVEQCEICQRNK EAT+PAGVL PLP P+ ILE+W+MDFIEGLPKAGGMNVIMVVVDRLSKYAYF+TMKHPF+AKQVA  FI+KI+ +HG
Subjt:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG

Query:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI
        +PKSI+SDRDK+F+S+FWKELF  M T LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQP +WH+FIPWAELWYNTTFHSS R+ PF+ VYGR PPP+
Subjt:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI

Query:  LSYGTRKTQNDEVEIMLKERDLALNAL
        +SYG +KT NDEVE +LKERDLA++AL
Subjt:  LSYGTRKTQNDEVEIMLKERDLALNAL

A0A5D3DU86 Ty3/gypsy retrotransposon protein1.4e-14875.84Show/hide
Query:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY
        M++ +E+ +L+TT IVDMEV+ KEV +DEELQ  I++L+ NP    K+   NG L YK RVVLSK SS+IP+LLHTFHDSILGGHSGFLRTYKRMSGEL+
Subjt:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY

Query:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG
        W+GMK DIKKYVEQCEICQRNK EAT+PAGVL PLP P+ ILE+W+MDFIEGLPKAGGMNVIMVVVDRLSKYAYF+TMKHPF+AKQVA  FI+KI+ +HG
Subjt:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG

Query:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI
        +PKSI+SDRDK+F+S+FWKELF  M T LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQP +WH+FIPWAELWYNTTFHSS R+ PF+ VYGR PPP+
Subjt:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI

Query:  LSYGTRKTQNDEVEIMLKERDLALNAL
        +SYG +KT NDEVE +LKERDLA++AL
Subjt:  LSYGTRKTQNDEVEIMLKERDLALNAL

A0A5D3DWA9 Ty3/gypsy retrotransposon protein1.4e-14875.84Show/hide
Query:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY
        M++ +E+ +L+TT IVDMEV+ KEV +DEELQ  I++L+ NP    K+   NG L YK RVVLSK SS+IP+LLHTFHDSILGGHSGFLRTYKRMSGEL+
Subjt:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY

Query:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG
        W+GMK DIKKYVEQCEICQRNK EAT+PAGVL PLP P+ ILE+W+MDFIEGLPKAGGMNVIMVVVDRLSKYAYF+TMKHPF+AKQVA  FI+KI+ +HG
Subjt:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG

Query:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI
        +PKSI+SDRDK+F+S+FWKELF  M T LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQP +WH+FIPWAELWYNTTFHSS R+ PF+ VYGR PPP+
Subjt:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI

Query:  LSYGTRKTQNDEVEIMLKERDLALNAL
        +SYG +KT NDEVE +LKERDLA++AL
Subjt:  LSYGTRKTQNDEVEIMLKERDLALNAL

A0A5D3DZK6 Ty3/gypsy retrotransposon protein1.4e-14875.84Show/hide
Query:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY
        M++ +E+ +L+TT IVDMEV+ KEV +DEELQ  I++L+ NP    K+   NG L YK RVVLSK SS+IP+LLHTFHDSILGGHSGFLRTYKRMSGEL+
Subjt:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY

Query:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG
        W+GMK DIKKYVEQCEICQRNK EAT+PAGVL PLP P+ ILE+W+MDFIEGLPKAGGMNVIMVVVDRLSKYAYF+TMKHPF+AKQVA  FI+KI+ +HG
Subjt:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG

Query:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI
        +PKSI+SDRDK+F+S+FWKELF  M T LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQP +WH+FIPWAELWYNTTFHSS R+ PF+ VYGR PPP+
Subjt:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI

Query:  LSYGTRKTQNDEVEIMLKERDLALNAL
        +SYG +KT NDEVE +LKERDLA++AL
Subjt:  LSYGTRKTQNDEVEIMLKERDLALNAL

A0A5D3E325 Ty3/gypsy retrotransposon protein1.4e-14875.84Show/hide
Query:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY
        M++ +E+ +L+TT IVDMEV+ KEV +DEELQ  I++L+ NP    K+   NG L YK RVVLSK SS+IP+LLHTFHDSILGGHSGFLRTYKRMSGEL+
Subjt:  MEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELY

Query:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG
        W+GMK DIKKYVEQCEICQRNK EAT+PAGVL PLP P+ ILE+W+MDFIEGLPKAGGMNVIMVVVDRLSKYAYF+TMKHPF+AKQVA  FI+KI+ +HG
Subjt:  WEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHG

Query:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI
        +PKSI+SDRDK+F+S+FWKELF  M T LKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQP +WH+FIPWAELWYNTTFHSS R+ PF+ VYGR PPP+
Subjt:  VPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPI

Query:  LSYGTRKTQNDEVEIMLKERDLALNAL
        +SYG +KT NDEVE +LKERDLA++AL
Subjt:  LSYGTRKTQNDEVEIMLKERDLALNAL

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.7e-4233.56Show/hide
Query:  VNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKK-RVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELYWEGMK
        VN ++ T     +V+ +  N  + L     E K+  E I     ++G L   K +++L   + +  T++  +H+     H G       +     W+G++
Subjt:  VNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKK-RVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELYWEGMK

Query:  ADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHGVPKSI
          I++YV+ C  CQ NK    +P G L P+P  E   E  SMDFI  LP++ G N + VVVDR SK A  +      TA+Q A  F +++I+  G PK I
Subjt:  ADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHGVPKSI

Query:  VSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQP
        ++D D +F S  WK+        +K S  + PQTDGQTER NQ +E  LRC C+  P  W   I   +  YN   HS+ +  PF+IV+   P
Subjt:  VSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQP

P0CT35 Transposon Tf2-2 polyprotein3.7e-4233.56Show/hide
Query:  VNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKK-RVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELYWEGMK
        VN ++ T     +V+ +  N  + L     E K+  E I     ++G L   K +++L   + +  T++  +H+     H G       +     W+G++
Subjt:  VNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKK-RVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELYWEGMK

Query:  ADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHGVPKSI
          I++YV+ C  CQ NK    +P G L P+P  E   E  SMDFI  LP++ G N + VVVDR SK A  +      TA+Q A  F +++I+  G PK I
Subjt:  ADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHGVPKSI

Query:  VSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQP
        ++D D +F S  WK+        +K S  + PQTDGQTER NQ +E  LRC C+  P  W   I   +  YN   HS+ +  PF+IV+   P
Subjt:  VSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQP

P0CT36 Transposon Tf2-3 polyprotein3.7e-4233.56Show/hide
Query:  VNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKK-RVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELYWEGMK
        VN ++ T     +V+ +  N  + L     E K+  E I     ++G L   K +++L   + +  T++  +H+     H G       +     W+G++
Subjt:  VNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKK-RVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELYWEGMK

Query:  ADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHGVPKSI
          I++YV+ C  CQ NK    +P G L P+P  E   E  SMDFI  LP++ G N + VVVDR SK A  +      TA+Q A  F +++I+  G PK I
Subjt:  ADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHGVPKSI

Query:  VSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQP
        ++D D +F S  WK+        +K S  + PQTDGQTER NQ +E  LRC C+  P  W   I   +  YN   HS+ +  PF+IV+   P
Subjt:  VSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQP

P0CT41 Transposon Tf2-12 polyprotein3.7e-4233.56Show/hide
Query:  VNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKK-RVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELYWEGMK
        VN ++ T     +V+ +  N  + L     E K+  E I     ++G L   K +++L   + +  T++  +H+     H G       +     W+G++
Subjt:  VNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKK-RVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELYWEGMK

Query:  ADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHGVPKSI
          I++YV+ C  CQ NK    +P G L P+P  E   E  SMDFI  LP++ G N + VVVDR SK A  +      TA+Q A  F +++I+  G PK I
Subjt:  ADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHGVPKSI

Query:  VSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQP
        ++D D +F S  WK+        +K S  + PQTDGQTER NQ +E  LRC C+  P  W   I   +  YN   HS+ +  PF+IV+   P
Subjt:  VSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQP

Q9UR07 Transposon Tf2-11 polyprotein3.7e-4233.56Show/hide
Query:  VNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKK-RVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELYWEGMK
        VN ++ T     +V+ +  N  + L     E K+  E I     ++G L   K +++L   + +  T++  +H+     H G       +     W+G++
Subjt:  VNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKK-RVVLSKKSSVIPTLLHTFHDSILGGHSGFLRTYKRMSGELYWEGMK

Query:  ADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHGVPKSI
          I++YV+ C  CQ NK    +P G L P+P  E   E  SMDFI  LP++ G N + VVVDR SK A  +      TA+Q A  F +++I+  G PK I
Subjt:  ADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIEKIISKHGVPKSI

Query:  VSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQP
        ++D D +F S  WK+        +K S  + PQTDGQTER NQ +E  LRC C+  P  W   I   +  YN   HS+ +  PF+IV+   P
Subjt:  VSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCATTATCTATTAGGAAGGAGGTTTACAATTCTCTCAGATCAAAAGGCATTGAAATTTCTCCTAGAGCAGAGGAGATGGAATATCCGCTGGAAGTAAACTCCTT
GACGACAACTGCCATTGTAGACATGGAAGTGATAGACAAGGAAGTCAACCAAGATGAGGAATTACAGAAAACCATTAAAGAATTGAAACAGAATCCAGAGGGAATTAGCA
AATTTATCTGGGAGAATGGGAAACTGTTCTACAAGAAAAGAGTGGTATTATCAAAGAAGTCGTCAGTGATTCCCACATTGCTGCATACATTCCATGACTCCATCTTAGGA
GGACACTCGGGATTCTTGAGGACATATAAAAGGATGAGCGGAGAGCTGTACTGGGAGGGAATGAAGGCTGATATAAAGAAATATGTGGAACAGTGTGAGATTTGTCAAAG
AAACAAATATGAGGCCACGAGACCAGCAGGGGTATTACATCCACTTCCTGCTCCGGAAGCCATACTAGAAGAATGGTCAATGGATTTCATAGAAGGGTTACCGAAGGCAG
GGGGAATGAATGTGATAATGGTGGTGGTAGACAGATTGAGCAAGTATGCTTATTTCATCACTATGAAGCACCCTTTCACAGCTAAACAAGTGGCGACGACATTTATTGAA
AAGATCATCAGCAAGCATGGGGTTCCAAAATCCATAGTATCCGACAGGGATAAAGTTTTCATTAGTCATTTTTGGAAGGAGTTATTTACAACTATGGGAACTAAACTGAA
AAGAAGCACGGCGTTCCACCCACAAACAGATGGACAAACGGAAAGGGTAAACCAATGTTTGGAGACATATTTGAGATGCTTTTGCAATGAACAACCCCAAAGGTGGCATA
AGTTCATTCCATGGGCTGAACTGTGGTATAACACTACTTTCCATTCATCCATACGTTCCAACCCTTTCAAGATTGTATATGGAAGGCAACCACCCCCGATTCTATCCTAC
GGAACCCGAAAAACTCAGAATGATGAGGTAGAAATAATGCTCAAGGAGAGAGATCTGGCATTGAACGCCTTAAATCCAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCATTATCTATTAGGAAGGAGGTTTACAATTCTCTCAGATCAAAAGGCATTGAAATTTCTCCTAGAGCAGAGGAGATGGAATATCCGCTGGAAGTAAACTCCTT
GACGACAACTGCCATTGTAGACATGGAAGTGATAGACAAGGAAGTCAACCAAGATGAGGAATTACAGAAAACCATTAAAGAATTGAAACAGAATCCAGAGGGAATTAGCA
AATTTATCTGGGAGAATGGGAAACTGTTCTACAAGAAAAGAGTGGTATTATCAAAGAAGTCGTCAGTGATTCCCACATTGCTGCATACATTCCATGACTCCATCTTAGGA
GGACACTCGGGATTCTTGAGGACATATAAAAGGATGAGCGGAGAGCTGTACTGGGAGGGAATGAAGGCTGATATAAAGAAATATGTGGAACAGTGTGAGATTTGTCAAAG
AAACAAATATGAGGCCACGAGACCAGCAGGGGTATTACATCCACTTCCTGCTCCGGAAGCCATACTAGAAGAATGGTCAATGGATTTCATAGAAGGGTTACCGAAGGCAG
GGGGAATGAATGTGATAATGGTGGTGGTAGACAGATTGAGCAAGTATGCTTATTTCATCACTATGAAGCACCCTTTCACAGCTAAACAAGTGGCGACGACATTTATTGAA
AAGATCATCAGCAAGCATGGGGTTCCAAAATCCATAGTATCCGACAGGGATAAAGTTTTCATTAGTCATTTTTGGAAGGAGTTATTTACAACTATGGGAACTAAACTGAA
AAGAAGCACGGCGTTCCACCCACAAACAGATGGACAAACGGAAAGGGTAAACCAATGTTTGGAGACATATTTGAGATGCTTTTGCAATGAACAACCCCAAAGGTGGCATA
AGTTCATTCCATGGGCTGAACTGTGGTATAACACTACTTTCCATTCATCCATACGTTCCAACCCTTTCAAGATTGTATATGGAAGGCAACCACCCCCGATTCTATCCTAC
GGAACCCGAAAAACTCAGAATGATGAGGTAGAAATAATGCTCAAGGAGAGAGATCTGGCATTGAACGCCTTAAATCCAAGATAA
Protein sequenceShow/hide protein sequence
MAALSIRKEVYNSLRSKGIEISPRAEEMEYPLEVNSLTTTAIVDMEVIDKEVNQDEELQKTIKELKQNPEGISKFIWENGKLFYKKRVVLSKKSSVIPTLLHTFHDSILG
GHSGFLRTYKRMSGELYWEGMKADIKKYVEQCEICQRNKYEATRPAGVLHPLPAPEAILEEWSMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITMKHPFTAKQVATTFIE
KIISKHGVPKSIVSDRDKVFISHFWKELFTTMGTKLKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPQRWHKFIPWAELWYNTTFHSSIRSNPFKIVYGRQPPPILSY
GTRKTQNDEVEIMLKERDLALNALNPR