; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G09790 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G09790
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionNiemann-Pick C1 protein-like isoform X2
Genome locationChr6:8405398..8406764
RNA-Seq ExpressionCSPI06G09790
SyntenyCSPI06G09790
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0048868 - pollen tube development (biological process)
GO:0090153 - regulation of sphingolipid biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
InterPro domainsIPR000731 - Sterol-sensing domain
IPR003392 - Protein patched/dispatched


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047847.1 Niemann-Pick C1 protein-like isoform X2 [Cucumis melo var. makuwa]1.0e-10298Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQPYELSLE+RIS ALVEVGPSITLASLSEILAFAVGTFVPMPACRVFS+FAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
        HPHSDEPNQGFNQGRHGLLSRYMKDVHAP LGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY

KAE8646830.1 hypothetical protein Csa_018310 [Cucumis sativus]2.9e-105100Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
        HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY

XP_008448193.1 PREDICTED: Niemann-Pick C1 protein-like isoform X1 [Cucumis melo]6.6e-10297.5Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQPYELSLE+RIS ALVEVGPSITLASLSEILAFAVGTFVPMPACRVFS+FAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
        HPHSDEPNQGFNQGRHGLLS YMKDVHAP LGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY

XP_011656918.1 NPC intracellular cholesterol transporter 1 isoform X1 [Cucumis sativus]2.9e-105100Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
        HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY

XP_011656920.1 NPC intracellular cholesterol transporter 1 isoform X2 [Cucumis sativus]2.9e-105100Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
        HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY

TrEMBL top hitse value%identityAlignment
A0A0A0KAX4 SSD domain-containing protein2.8e-106100Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
        HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY

Query:  R
        R
Subjt:  R

A0A1S3BJ43 Niemann-Pick C1 protein-like isoform X13.2e-10297.5Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQPYELSLE+RIS ALVEVGPSITLASLSEILAFAVGTFVPMPACRVFS+FAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
        HPHSDEPNQGFNQGRHGLLS YMKDVHAP LGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY

A0A1S3BJR3 Niemann-Pick C1 protein-like isoform X23.2e-10297.5Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQPYELSLE+RIS ALVEVGPSITLASLSEILAFAVGTFVPMPACRVFS+FAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
        HPHSDEPNQGFNQGRHGLLS YMKDVHAP LGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY

A0A5A7U0V7 Niemann-Pick C1 protein-like isoform X24.9e-10398Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQPYELSLE+RIS ALVEVGPSITLASLSEILAFAVGTFVPMPACRVFS+FAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
        HPHSDEPNQGFNQGRHGLLSRYMKDVHAP LGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY

A0A6J1CI77 Niemann-Pick C1 protein4.5e-9692.5Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQP+EL+LEERIS ALVEVGPSITLASLSEILAFAVG FVPMPACRVFSMFAALAVLLDFILQLSAFVALIV DILRAEDHRVDCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
         PHSDEPNQGFNQG+ GLLS YMKDVHAP LG WGVKI V+VIFVG TLG IALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY

SwissProt top hitse value%identityAlignment
O15118 NPC intracellular cholesterol transporter 13.1e-3039.09Show/hide
Query:  ILVHAVKRQP--YELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        ILV A +R       +L++++   L EV PS+ L+S SE +AF +G    MPA   FS+FA LAV +DF+LQ++ FV+L+ LDI R E +R+D F C++ 
Subjt:  ILVHAVKRQP--YELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKD
                    Q     L R+ K+ ++P L    ++ +V+ IFVG+   SIA+  K+++GL+Q + +P DSY+ DYF  +++YL  GPP+YFV+++
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKD

O35604 NPC intracellular cholesterol transporter 11.4e-3039.8Show/hide
Query:  ILVHAVKRQP--YELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        ILV   +R     E +L++++   L EV P++ L+S SE  AF  G    MPA   FS+FA +AVL+DF+LQ++ FV+L+ LDI R E + +D   C++ 
Subjt:  ILVHAVKRQP--YELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKD-YN
             +  QG +      L R+ K+  AP L    ++ +VV +FVG+   S+A+  K+++GL+Q + +P DSY+ DYF  LA+YL  GPP+YFV+++ YN
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKD-YN

Query:  Y
        Y
Subjt:  Y

P56941 NPC intracellular cholesterol transporter 18.3e-3141.4Show/hide
Query:  SLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKVHPHSDEPNQGFNQGR
        +L++++   L EV PS+ L+S SE +AF +G    +PA   FS+FA +AVL+DF+LQ++ FV+L+ LDI R E +R+D   C++      E   G  Q  
Subjt:  SLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKVHPHSDEPNQGFNQGR

Query:  HGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKD-YNY
           L R+ K+ +AP L    ++ +V+ +FVG+   SIA+  K+E+GL+Q + +P DSY+ DYF  L+ YL  GPP+YFVV++ +NY
Subjt:  HGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKD-YNY

Q6T3U3 NPC1-like intracellular cholesterol transporter 11.0e-2842.78Show/hide
Query:  EERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVD---CFPCIKVHPHSDEPNQGFNQG
        E  I   L  V PS+ L SLSE + F +G   PMPA R F++ + LA++LDF+LQ++AFVAL+ LD  R E  R D   CF   K+ P  +         
Subjt:  EERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVD---CFPCIKVHPHSDEPNQGFNQG

Query:  RHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFV
        + GLL R+ + ++APFL    ++ VV+++F+ L   ++ L   I VGL+Q++ LP+DSYL DYF  L  YL +GPP+YFV
Subjt:  RHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFV

Q9UHC9 NPC1-like intracellular cholesterol transporter 17.8e-2944.02Show/hide
Query:  EERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKVHPHSDEPNQGFNQGRHG
        E  I  AL  V PS+ L SLSE + F +G   PMPA R F++ + LAV+LDF+LQ+SAFVAL+ LD  R E  R+D   C+K       P QG      G
Subjt:  EERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKVHPHSDEPNQGFNQGRHG

Query:  LLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVK-DYNY
        LL  + +  +APFL  W  + VV+++F+ L   S+     I VGL+Q++ LP+DSYL DYF  L  Y  +G P+YFV    YN+
Subjt:  LLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVK-DYNY

Arabidopsis top hitse value%identityAlignment
AT1G42470.1 Patched family protein2.6e-7270.5Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQ  EL LE RIS AL+EVGPSITLASL+EILAFAVG F+ MPA RVFSMFAALAVLLDF+LQ++AFVALIV D  R ED RVDCFPCIK 
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY
           S    +G  Q + GLL+RYMK+VHAP L  W VKIVV+  F GL +  IALST+IE GLEQ+IVLP+DSYLQ YF++++ YLRIGPPLYFV+K+YNY
Subjt:  HPHSDEPNQGFNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNY

AT4G38350.1 Patched family protein1.2e-7773.63Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQP E+SLE+RIS ALVEVGPSITLASLSE+LAFAVG FVPMPACR+FSMFAALA++LDF LQ++AFVALIV D  R+ D+R+DCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRH-GLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYN
           S E  +G   GR  G L RYMK+VHAP LG WGVK+VVV +F    L SIA+S ++E GLEQKIVLPRDSYLQDYFD L+EYLR+GPPLYFVVK+YN
Subjt:  HPHSDEPNQGFNQGRH-GLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYN

Query:  Y
        Y
Subjt:  Y

AT4G38350.2 Patched family protein1.2e-7773.63Show/hide
Query:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV
        MCILVHAVKRQP E+SLE+RIS ALVEVGPSITLASLSE+LAFAVG FVPMPACR+FSMFAALA++LDF LQ++AFVALIV D  R+ D+R+DCFPCIKV
Subjt:  MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKV

Query:  HPHSDEPNQGFNQGRH-GLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYN
           S E  +G   GR  G L RYMK+VHAP LG WGVK+VVV +F    L SIA+S ++E GLEQKIVLPRDSYLQDYFD L+EYLR+GPPLYFVVK+YN
Subjt:  HPHSDEPNQGFNQGRH-GLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYN

Query:  Y
        Y
Subjt:  Y


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTATATTAGTACACGCTGTGAAACGACAGCCATATGAGTTGTCTCTAGAAGAGCGCATAAGCTGTGCGCTGGTTGAAGTTGGTCCTTCCATAACATTAGCTAGTTT
GTCAGAGATCTTGGCTTTTGCCGTTGGAACTTTTGTTCCGATGCCAGCATGCCGTGTTTTTTCCATGTTTGCTGCTTTGGCAGTGTTGCTCGACTTCATTCTTCAACTGT
CAGCATTTGTGGCTCTTATAGTGTTGGATATTTTAAGAGCGGAGGATCACAGAGTCGACTGTTTCCCATGCATAAAAGTTCATCCACATTCTGATGAACCTAACCAAGGC
TTCAATCAAGGGAGACATGGGCTTCTTTCTCGGTACATGAAGGACGTTCATGCACCCTTCCTTGGATTTTGGGGAGTTAAGATTGTTGTTGTTGTCATCTTTGTTGGATT
AACTTTAGGAAGCATTGCATTATCTACTAAGATTGAGGTTGGATTGGAACAAAAGATTGTTCTCCCACGAGATTCTTACCTTCAGGATTATTTTGACGATCTTGCGGAAT
ATCTACGAATTGGGCCACCATTATATTTCGTTGTGAAGGATTACAATTATAGGTAG
mRNA sequenceShow/hide mRNA sequence
GGTAGGAGTTGACAACATGTGTATATTAGTACACGCTGTGAAACGACAGCCATATGAGTTGTCTCTAGAAGAGCGCATAAGCTGTGCGCTGGTTGAAGTTGGTCCTTCCA
TAACATTAGCTAGTTTGTCAGAGATCTTGGCTTTTGCCGTTGGAACTTTTGTTCCGATGCCAGCATGCCGTGTTTTTTCCATGTTTGCTGCTTTGGCAGTGTTGCTCGAC
TTCATTCTTCAACTGTCAGCATTTGTGGCTCTTATAGTGTTGGATATTTTAAGAGCGGAGGATCACAGAGTCGACTGTTTCCCATGCATAAAAGTTCATCCACATTCTGA
TGAACCTAACCAAGGCTTCAATCAAGGGAGACATGGGCTTCTTTCTCGGTACATGAAGGACGTTCATGCACCCTTCCTTGGATTTTGGGGAGTTAAGATTGTTGTTGTTG
TCATCTTTGTTGGATTAACTTTAGGAAGCATTGCATTATCTACTAAGATTGAGGTTGGATTGGAACAAAAGATTGTTCTCCCACGAGATTCTTACCTTCAGGATTATTTT
GACGATCTTGCGGAATATCTACGAATTGGGCCACCATTATATTTCGTTGTGAAGGATTACAATTATAGGTAG
Protein sequenceShow/hide protein sequence
MCILVHAVKRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALIVLDILRAEDHRVDCFPCIKVHPHSDEPNQG
FNQGRHGLLSRYMKDVHAPFLGFWGVKIVVVVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNYR