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CSPI06G10060 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G10060
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCell wall protein
Genome locationChr6:8682765..8683265
RNA-Seq ExpressionCSPI06G10060
SyntenyCSPI06G10060
Gene Ontology termsNA
InterPro domainsIPR034565 - Putative cell wall protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065341.1 putative cell wall protein [Cucumis melo var. makuwa]3.2e-2181.16Show/hide
Query:  SVLIPGIGRITLS-------RGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP
        SVLIPGIGRITLS        GGHSSSYGSNPAP+RQYIPGGD NFIPNPGYEV I A+IGGVKETSYP
Subjt:  SVLIPGIGRITLS-------RGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP

XP_022140620.1 putative cell wall protein [Momordica charantia]7.6e-2368.6Show/hide
Query:  NSDDDKKQPQWLIGYDRVSVLIPGIGRITL------SRGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP
        +S DDKKQPQWL+GYD VSVLIPGIGRITL      S G H+ SYGSNPA   QYIPGGD NFIPNPG+EV   A+IG VK T +P
Subjt:  NSDDDKKQPQWLIGYDRVSVLIPGIGRITL------SRGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP

XP_022764046.1 putative cell wall protein [Durio zibethinus]1.4e-0834.88Show/hide
Query:  SRFNSPPKLHLPFSFSVHLPYIYKNTSLLPVSSSQNKPPLALLTISDKWLTESY-----LLC-------------------SLSSLLNSDDDKKQPQWLI
        S FNSPP           L   YK    LP        P++ L+  +  L  +Y     LLC                    + S   +DD  KQP+WLI
Subjt:  SRFNSPPKLHLPFSFSVHLPYIYKNTSLLPVSSSQNKPPLALLTISDKWLTESY-----LLC-------------------SLSSLLNSDDDKKQPQWLI

Query:  GYDRVSVLIPGIGRITLS--RGGHSSSYGSNPAPR---RQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP
         +DR SVLIPGIGR+ L      H+   G N         YIPGGD  F+PNPG+EV I     G   T YP
Subjt:  GYDRVSVLIPGIGRITLS--RGGHSSSYGSNPAPR---RQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP

XP_022970746.1 putative cell wall protein [Cucurbita maxima]1.8e-2470.11Show/hide
Query:  NSDDDKKQPQWLIGYDRVSVLIPGIGRITLS---RG----GHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP
        +S DDKKQP+W+ G+D VSVLIPGIGR TLS   +G    G + SYGSNPAPRRQYIPGGD NFIPNPG+EV I A I GVKET YP
Subjt:  NSDDDKKQPQWLIGYDRVSVLIPGIGRITLS---RG----GHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP

XP_034206933.1 putative cell wall protein [Prunus dulcis]1.8e-0844.94Show/hide
Query:  DDKKQPQWLIGYDRVSVLIPGIGRI-------------------TLSRGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGG
        DDKKQP+W IG+D  S LIPGIGR+                   T S GG  S  G  P+    Y+PGGD  F+PNPGYEV I  +  G
Subjt:  DDKKQPQWLIGYDRVSVLIPGIGRI-------------------TLSRGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGG

TrEMBL top hitse value%identityAlignment
A0A0A0KCX5 Uncharacterized protein6.5e-2898.41Show/hide
Query:  VSVLIPGIGRITLSRGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP
        VSVLIPGIGR+TLSRGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP
Subjt:  VSVLIPGIGRITLSRGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP

A0A5D3BC54 Putative cell wall protein1.6e-2181.16Show/hide
Query:  SVLIPGIGRITLS-------RGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP
        SVLIPGIGRITLS        GGHSSSYGSNPAP+RQYIPGGD NFIPNPGYEV I A+IGGVKETSYP
Subjt:  SVLIPGIGRITLS-------RGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP

A0A6J1CFL0 putative cell wall protein3.7e-2368.6Show/hide
Query:  NSDDDKKQPQWLIGYDRVSVLIPGIGRITL------SRGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP
        +S DDKKQPQWL+GYD VSVLIPGIGRITL      S G H+ SYGSNPA   QYIPGGD NFIPNPG+EV   A+IG VK T +P
Subjt:  NSDDDKKQPQWLIGYDRVSVLIPGIGRITL------SRGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP

A0A6J1I1F6 putative cell wall protein8.8e-2570.11Show/hide
Query:  NSDDDKKQPQWLIGYDRVSVLIPGIGRITLS---RG----GHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP
        +S DDKKQP+W+ G+D VSVLIPGIGR TLS   +G    G + SYGSNPAPRRQYIPGGD NFIPNPG+EV I A I GVKET YP
Subjt:  NSDDDKKQPQWLIGYDRVSVLIPGIGRITLS---RG----GHSSSYGSNPAPRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP

A0A6P6AGW9 putative cell wall protein6.8e-0934.88Show/hide
Query:  SRFNSPPKLHLPFSFSVHLPYIYKNTSLLPVSSSQNKPPLALLTISDKWLTESY-----LLC-------------------SLSSLLNSDDDKKQPQWLI
        S FNSPP           L   YK    LP        P++ L+  +  L  +Y     LLC                    + S   +DD  KQP+WLI
Subjt:  SRFNSPPKLHLPFSFSVHLPYIYKNTSLLPVSSSQNKPPLALLTISDKWLTESY-----LLC-------------------SLSSLLNSDDDKKQPQWLI

Query:  GYDRVSVLIPGIGRITLS--RGGHSSSYGSNPAPR---RQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP
         +DR SVLIPGIGR+ L      H+   G N         YIPGGD  F+PNPG+EV I     G   T YP
Subjt:  GYDRVSVLIPGIGRITLS--RGGHSSSYGSNPAPR---RQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20870.1 cell wall protein precursor, putative8.5e-0431.25Show/hide
Query:  DKKQPQWLIGYD-RVSVLIPGIGRI-------------------TLSRGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYE
        D K P +L+  + + ++LIPG+GR                     L+ GG  S  G   A     +PGGD   +PNPG+E
Subjt:  DKKQPQWLIGYD-RVSVLIPGIGRI-------------------TLSRGGHSSSYGSNPAPRRQYIPGGDGNFIPNPGYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAATTATCTCGTTTTAATTCACCGCCAAAACTTCATCTACCGTTCTCCTTCTCAGTTCATCTTCCTTACATCTATAAGAACACCTCTCTTCTCCCTGTTTCTTC
ATCACAAAACAAACCTCCTCTTGCATTACTCACAATATCAGATAAATGGCTCACAGAATCATACCTTCTATGCTCCCTATCTTCCTTGTTGAACAGCGACGATGATAAGA
AACAGCCTCAATGGCTGATTGGATATGATAGGGTCAGTGTGCTCATTCCTGGCATTGGACGCATCACATTGTCACGAGGAGGGCATTCGAGTTCATATGGCAGTAACCCA
GCTCCAAGACGTCAATATATTCCAGGTGGGGATGGCAATTTCATTCCAAATCCTGGATATGAGGTGCGAATCACTGCCGATATCGGTGGTGTTAAAGAAACATCCTATCC
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAATTATCTCGTTTTAATTCACCGCCAAAACTTCATCTACCGTTCTCCTTCTCAGTTCATCTTCCTTACATCTATAAGAACACCTCTCTTCTCCCTGTTTCTTC
ATCACAAAACAAACCTCCTCTTGCATTACTCACAATATCAGATAAATGGCTCACAGAATCATACCTTCTATGCTCCCTATCTTCCTTGTTGAACAGCGACGATGATAAGA
AACAGCCTCAATGGCTGATTGGATATGATAGGGTCAGTGTGCTCATTCCTGGCATTGGACGCATCACATTGTCACGAGGAGGGCATTCGAGTTCATATGGCAGTAACCCA
GCTCCAAGACGTCAATATATTCCAGGTGGGGATGGCAATTTCATTCCAAATCCTGGATATGAGGTGCGAATCACTGCCGATATCGGTGGTGTTAAAGAAACATCCTATCC
TTGA
Protein sequenceShow/hide protein sequence
MEQLSRFNSPPKLHLPFSFSVHLPYIYKNTSLLPVSSSQNKPPLALLTISDKWLTESYLLCSLSSLLNSDDDKKQPQWLIGYDRVSVLIPGIGRITLSRGGHSSSYGSNP
APRRQYIPGGDGNFIPNPGYEVRITADIGGVKETSYP