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CSPI06G10110 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G10110
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionXyloglucan endotransglucosylase/hydrolase protein 9
Genome locationChr6:8741226..8741809
RNA-Seq ExpressionCSPI06G10110
SyntenyCSPI06G10110
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011935.1 hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-1349.5Show/hide
Query:  VVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPNHV
        + +++L+SLILA +  IQ  A+  T      +A     +  + + V+GP +AE P IRRLGKHH   SVAGG V+IG L TAVFA VFCYIRVTRK + V
Subjt:  VVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPNHV

Query:  N
        +
Subjt:  N

KAG7034949.1 hypothetical protein SDJN02_01742 [Cucurbita argyrosperma subsp. argyrosperma]4.2e-2364.71Show/hide
Query:  AVVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKE-EAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPN
        AVVR  L+ L+L GM+  QLTAA+  EAP V TA+ F  +IGKE E    P VA GP IRRLGKHH HTS+AGG VL+G LATAVFA+VFCYIRVTRK +
Subjt:  AVVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKE-EAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPN

Query:  HV
         V
Subjt:  HV

KGN46704.1 hypothetical protein Csa_020980 [Cucumis sativus]5.4e-4799.04Show/hide
Query:  MAAVVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKP
        MAAVVRLALMSLILAGMFFIQLTAANV EAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKP
Subjt:  MAAVVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKP

Query:  NHVN
        NHVN
Subjt:  NHVN

XP_022947872.1 uncharacterized protein LOC111451632 [Cucurbita moschata]4.2e-2364.71Show/hide
Query:  AVVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKE-EAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPN
        AVVR  L+ L+L GM+  QLTAA+  EAP V TA+ F  +IGKE E    P VA GP IRRLGKHH HTS+AGG VL+G LATAVFA+VFCYIRVTRK +
Subjt:  AVVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKE-EAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPN

Query:  HV
         V
Subjt:  HV

XP_023532519.1 uncharacterized protein LOC111794654 [Cucurbita pepo subsp. pepo]1.9e-2364.08Show/hide
Query:  AVVRLALMSLILAGMFFIQLTAANVTEAPMVDTAL-FFGSKIGKEEAVQGPV-VAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKP
        AVVR  L+ L+L GM+  QLTAA+  EAP V TA+ FFG++IG E  ++    VA GP IRRLGKHH HTS+AGG VL+G LATAVFA+VFCYIRVTRKP
Subjt:  AVVRLALMSLILAGMFFIQLTAANVTEAPMVDTAL-FFGSKIGKEEAVQGPV-VAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKP

Query:  NHV
        + V
Subjt:  NHV

TrEMBL top hitse value%identityAlignment
A0A0A0K3N0 Uncharacterized protein5.1e-1146.88Show/hide
Query:  LMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPNHVN
        L  LI+  +F IQ    ++  A   +  L    +  ++   +G  VAE P IRRLGKHH   S+AGG V+IG L TAVFA VFCYIRVTRK + V+
Subjt:  LMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPNHVN

A0A0A0KCY0 Uncharacterized protein2.6e-4799.04Show/hide
Query:  MAAVVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKP
        MAAVVRLALMSLILAGMFFIQLTAANV EAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKP
Subjt:  MAAVVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKP

Query:  NHVN
        NHVN
Subjt:  NHVN

A0A5D3C590 Uncharacterized protein5.1e-1148.96Show/hide
Query:  LMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPNHVN
        L  LI+A +  IQ   A  + A   D  L    +  ++   +G  VAE P IRRLGKHH   SVAGG V+IG L TA+FA VFCYIRVTRK + V+
Subjt:  LMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPNHVN

A0A6J1G7L7 uncharacterized protein LOC1114516322.0e-2364.71Show/hide
Query:  AVVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKE-EAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPN
        AVVR  L+ L+L GM+  QLTAA+  EAP V TA+ F  +IGKE E    P VA GP IRRLGKHH HTS+AGG VL+G LATAVFA+VFCYIRVTRK +
Subjt:  AVVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKE-EAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPN

Query:  HV
         V
Subjt:  HV

W9R8T9 Uncharacterized protein3.9e-1144.64Show/hide
Query:  VVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKE------------EAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVF
        + R+ L+ LIL G+  IQ  AA     P         S++  +            EA      AE PAIRRLGKHH   S+AGG V+IG L TA+FA VF
Subjt:  VVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKE------------EAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVF

Query:  CYIRVTRKPNHV
        CYIRVTRK N V
Subjt:  CYIRVTRKPNHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein9.9e-0746.67Show/hide
Query:  EAVQGPVVAEGPAIRRLGKHH--FHTSVAGGRVLIGSLATAVFAIVFCYIRVTR--KPNH
        E  + P V+      R G HH     SVAGG V++G LAT    +VFCYIR TR  KPN+
Subjt:  EAVQGPVVAEGPAIRRLGKHH--FHTSVAGGRVLIGSLATAVFAIVFCYIRVTR--KPNH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTGTGGTTCGACTTGCTTTGATGTCTCTGATTCTTGCTGGGATGTTTTTTATTCAACTAACGGCTGCGAATGTCACGGAGGCACCAATGGTAGACACTGCGTT
GTTTTTCGGGTCTAAAATTGGAAAGGAAGAGGCAGTTCAAGGGCCGGTAGTGGCTGAAGGTCCTGCAATCAGAAGGCTGGGCAAGCATCATTTTCACACCTCGGTTGCCG
GCGGTCGGGTGCTCATCGGTAGCCTTGCTACTGCTGTGTTTGCTATTGTGTTTTGCTACATAAGGGTGACTAGAAAGCCTAACCATGTCAACTAG
mRNA sequenceShow/hide mRNA sequence
AAGAGTTCAGTTCAGCTATCAATTTCTCTCTCTATATAACCCTTTCCCATTTCATCCCGCTGTCCACTGCTAGCAGCTTTTTCCCTCTCCCAAGTTTACATTTTCAAAAG
AAAAAAAATTCCAATTCCAATTCCAATTCCAATTCAGATTCAAAATCTATGGCAGCTGTGGTTCGACTTGCTTTGATGTCTCTGATTCTTGCTGGGATGTTTTTTATTCA
ACTAACGGCTGCGAATGTCACGGAGGCACCAATGGTAGACACTGCGTTGTTTTTCGGGTCTAAAATTGGAAAGGAAGAGGCAGTTCAAGGGCCGGTAGTGGCTGAAGGTC
CTGCAATCAGAAGGCTGGGCAAGCATCATTTTCACACCTCGGTTGCCGGCGGTCGGGTGCTCATCGGTAGCCTTGCTACTGCTGTGTTTGCTATTGTGTTTTGCTACATA
AGGGTGACTAGAAAGCCTAACCATGTCAACTAGTCGAACTCTTTTAGTTTCTTTTTCCACTTTTTCTTTACTGATTACGAGTACGTGTGAGAGTGATTCTTGAATGTTTT
ATAATCATTTTTTGTGTCATAAAGTGTTCTAAAC
Protein sequenceShow/hide protein sequence
MAAVVRLALMSLILAGMFFIQLTAANVTEAPMVDTALFFGSKIGKEEAVQGPVVAEGPAIRRLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPNHVN