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CSPI06G10140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G10140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDUF4283 domain-containing protein
Genome locationChr6:8759555..8760051
RNA-Seq ExpressionCSPI06G10140
SyntenyCSPI06G10140
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034060.1 hypothetical protein E6C27_scaffold65G00460 [Cucumis melo var. makuwa]9.0e-1858.06Show/hide
Query:  IRLILRPGALELN--FQKSQQSPDQTKPNNVCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG
        I  +L PG    N    K+   P       +C NFD KD  L  +ALKDLIGLH+PSIVLIFGSKISSSDADEV+RE  F+GFY RK DG NG
Subjt:  IRLILRPGALELN--FQKSQQSPDQTKPNNVCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG

KAE8646846.1 hypothetical protein Csa_020922 [Cucumis sativus]3.2e-3198.53Show/hide
Query:  VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNGVNKRR
        +CCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNGVNKRR
Subjt:  VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNGVNKRR

KGN50456.1 hypothetical protein Csa_000264 [Cucumis sativus]1.3e-2777.78Show/hide
Query:  ELNFQKSQQSPDQTKPNNVCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG
        E++ + +   P       +CCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRK DGNNG
Subjt:  ELNFQKSQQSPDQTKPNNVCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG

XP_022941630.1 uncharacterized protein LOC111446932 isoform X1 [Cucurbita moschata]6.7e-1366.67Show/hide
Query:  VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG
        +C NF   D    +RALKDLI LHKPSIVLIFG+KIS +DAD VVRE AF+G YCRK DG  G
Subjt:  VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG

XP_022941632.1 uncharacterized protein LOC111446932 isoform X2 [Cucurbita moschata]6.7e-1366.67Show/hide
Query:  VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG
        +C NF   D    +RALKDLI LHKPSIVLIFG+KIS +DAD VVRE AF+G YCRK DG  G
Subjt:  VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG

TrEMBL top hitse value%identityAlignment
A0A0A0KB07 Uncharacterized protein3.4e-4780.31Show/hide
Query:  MLLIVDRLFIRLILRPGALELNFQKSQQSPDQTKPNN----------------------VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDA
        MLLIVDRLFIRLILRPGALELNFQKSQQSPDQTKP                        +CCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDA
Subjt:  MLLIVDRLFIRLILRPGALELNFQKSQQSPDQTKPNN----------------------VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDA

Query:  DEVVREFAFNGFYCRKHDGNNGVNKRR
        DEVVREFAFNGFYCRKHDGNNGVNKRR
Subjt:  DEVVREFAFNGFYCRKHDGNNGVNKRR

A0A0A0KRY0 DUF4283 domain-containing protein6.1e-2877.78Show/hide
Query:  ELNFQKSQQSPDQTKPNNVCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG
        E++ + +   P       +CCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRK DGNNG
Subjt:  ELNFQKSQQSPDQTKPNNVCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG

A0A5A7SSW6 DUF4283 domain-containing protein4.4e-1858.06Show/hide
Query:  IRLILRPGALELN--FQKSQQSPDQTKPNNVCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG
        I  +L PG    N    K+   P       +C NFD KD  L  +ALKDLIGLH+PSIVLIFGSKISSSDADEV+RE  F+GFY RK DG NG
Subjt:  IRLILRPGALELN--FQKSQQSPDQTKPNNVCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG

A0A6J1FN13 uncharacterized protein LOC111446932 isoform X23.2e-1366.67Show/hide
Query:  VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG
        +C NF   D    +RALKDLI LHKPSIVLIFG+KIS +DAD VVRE AF+G YCRK DG  G
Subjt:  VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG

A0A6J1FU80 uncharacterized protein LOC111446932 isoform X13.2e-1366.67Show/hide
Query:  VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG
        +C NF   D    +RALKDLI LHKPSIVLIFG+KIS +DAD VVRE AF+G YCRK DG  G
Subjt:  VCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTGATAGTTGACCGACTGTTTATACGATTAATCCTACGACCAGGAGCCTTGGAATTGAATTTTCAGAAGTCCCAACAATCACCGGATCAAACCAAACCCAACAA
TGTGTGCTGCAATTTTGATTGGAAGGACGCTGAACTGCAAATAAGAGCATTGAAAGATCTGATTGGACTACACAAGCCATCCATTGTGCTGATCTTTGGCTCCAAGATCA
GCAGTTCTGATGCGGATGAGGTTGTGCGAGAGTTTGCTTTCAATGGTTTCTACTGTAGAAAGCACGACGGCAACAATGGTGTTAATAAAAGAAGATAA
mRNA sequenceShow/hide mRNA sequence
ACCACATACACCATCTCCATTTACAAAAATAGAGATTTATTAACAACAGTGAAAGAGATGATGAACACACCATTTGGAGTAGTCGATGTTGTTGATAGTTGACCGACTGT
TTATACGATTAATCCTACGACCAGGAGCCTTGGAATTGAATTTTCAGAAGTCCCAACAATCACCGGATCAAACCAAACCCAACAATGTGTGCTGCAATTTTGATTGGAAG
GACGCTGAACTGCAAATAAGAGCATTGAAAGATCTGATTGGACTACACAAGCCATCCATTGTGCTGATCTTTGGCTCCAAGATCAGCAGTTCTGATGCGGATGAGGTTGT
GCGAGAGTTTGCTTTCAATGGTTTCTACTGTAGAAAGCACGACGGCAACAATGGTGTTAATAAAAGAAGATAA
Protein sequenceShow/hide protein sequence
MLLIVDRLFIRLILRPGALELNFQKSQQSPDQTKPNNVCCNFDWKDAELQIRALKDLIGLHKPSIVLIFGSKISSSDADEVVREFAFNGFYCRKHDGNNGVNKRR