CuGenDBv2

Gene ID	CSPI06G10160
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	zinc finger BED domain-containing protein RICESLEEPER 2-like
Genome location	Chr6:8781285..8782140
RNA-Seq Expression	CSPI06G10160
Synteny	CSPI06G10160
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0009791 - post-embryonic development (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0004177 - aminopeptidase activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0008237 - metallopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR008906 - HAT, C-terminal dimerisation domain IPR012337 - Ribonuclease H-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ACX85638.1 putative transposase [Cucumis melo]

1.6e-41

80.91

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Query:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF
        +EGFGFQSQ+EIPS SSSGSYKARA VHDRFKQ  KTC+DD KT+V RYLDEARI+   DEYLDLL WWK N+SRFKIIS+VARDIYSIPIS VPS+SAF
Subjt:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF

Query:  NTGGRVLDSF
        +TGGRVLDSF
Subjt:  NTGGRVLDSF

ADN33674.1 transposase [Cucumis melo subsp. melo]

1.6e-41

80.91

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Query:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF
        +EGFGFQSQ+EIPS SSSGSYKARA VHDRFKQ  KTC+DD KT+V RYLDEARI+   DEYLDLL WWK N+SRFKIIS+VARDIYSIPIS VPS+SAF
Subjt:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF

Query:  NTGGRVLDSF
        +TGGRVLDSF
Subjt:  NTGGRVLDSF

KAA0039652.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo var. makuwa]

9.8e-44

85.98

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Query:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTG
        MEGF FQSQ+EIPS SSSGSYKA AAVHDRFKQ  KTC+DD KT+VARYLDEARIEDEYLDLLNWWK NSSRFKIIS+VARDIYS PIS VP +SAFNTG
Subjt:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTG

Query:  GRVLDSF
        GRVLDSF
Subjt:  GRVLDSF

KAA0064124.1 putative aspartyl aminopeptidase [Cucumis melo var. makuwa]

1.6e-41

80.91

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Query:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF
        +EGFGFQSQ+EIPS SSSGSYKARA VHDRFKQ  KTC+DD KT+V RYLDEARI+   DEYLDLL WWK N+SRFKIIS+VARDIYSIPIS VPS+SAF
Subjt:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF

Query:  NTGGRVLDSF
        +TGGRVLDSF
Subjt:  NTGGRVLDSF

TYK04294.1 zinc finger BED domain-containing protein RICESLEEPER 4-like [Cucumis melo var. makuwa]

2.7e-41

81.31

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Query:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTG
        +EGFGFQSQ+ IPS SSSGSYKAR  VH+ FKQ  KTC+DD KT+V RYLDE RIEDEYLDLLNWWK NSSRFKIIS+VARDIYSIPIS VPS+SAF+TG
Subjt:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTG

Query:  GRVLDSF
        GRVLDSF
Subjt:  GRVLDSF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7VA60 Putative aspartyl aminopeptidase

7.6e-42

80.91

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Query:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF
        +EGFGFQSQ+EIPS SSSGSYKARA VHDRFKQ  KTC+DD KT+V RYLDEARI+   DEYLDLL WWK N+SRFKIIS+VARDIYSIPIS VPS+SAF
Subjt:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF

Query:  NTGGRVLDSF
        +TGGRVLDSF
Subjt:  NTGGRVLDSF

A0A5D3B9J0 Zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3

4.7e-44

85.98

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Query:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTG
        MEGF FQSQ+EIPS SSSGSYKA AAVHDRFKQ  KTC+DD KT+VARYLDEARIEDEYLDLLNWWK NSSRFKIIS+VARDIYS PIS VP +SAFNTG
Subjt:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTG

Query:  GRVLDSF
        GRVLDSF
Subjt:  GRVLDSF

A0A5D3BZ93 Zinc finger BED domain-containing protein RICESLEEPER 4-like

1.3e-41

81.31

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Query:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTG
        +EGFGFQSQ+ IPS SSSGSYKAR  VH+ FKQ  KTC+DD KT+V RYLDE RIEDEYLDLLNWWK NSSRFKIIS+VARDIYSIPIS VPS+SAF+TG
Subjt:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTG

Query:  GRVLDSF
        GRVLDSF
Subjt:  GRVLDSF

D0UIX2 Putative transposase

7.6e-42

80.91

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Query:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF
        +EGFGFQSQ+EIPS SSSGSYKARA VHDRFKQ  KTC+DD KT+V RYLDEARI+   DEYLDLL WWK N+SRFKIIS+VARDIYSIPIS VPS+SAF
Subjt:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF

Query:  NTGGRVLDSF
        +TGGRVLDSF
Subjt:  NTGGRVLDSF

E5GB32 Transposase

7.6e-42

80.91

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Query:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF
        +EGFGFQSQ+EIPS SSSGSYKARA VHDRFKQ  KTC+DD KT+V RYLDEARI+   DEYLDLL WWK N+SRFKIIS+VARDIYSIPIS VPS+SAF
Subjt:  MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIE---DEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF

Query:  NTGGRVLDSF
        +TGGRVLDSF
Subjt:  NTGGRVLDSF

SwissProt top hits

e value

%identity

Alignment

B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 1

1.8e-08

41.67

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Query:  TKTKVARYLDEA---RIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF---NTGGRVLDSF
        TK+++ +YLDE+   RI++   D+LNWWK N+ ++  +S++ARDI +IP+S+V S ++     TG R+LD +
Subjt:  TKTKVARYLDEA---RIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF---NTGGRVLDSF

P03010 Putative AC9 transposase

1.2e-07

36.07

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Query:  RYLDEARIEDE-YLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTGGRVLDSF
        +Y+ E  ++     D+L+WW+   + + I++++ARD+ +I +S V S+SAF+ GGRV+D +
Subjt:  RYLDEARIEDE-YLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTGGRVLDSF

P08770 Putative AC transposase

1.2e-07

36.07

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Query:  RYLDEARIEDE-YLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTGGRVLDSF
        +Y+ E  ++     D+L+WW+   + + I++++ARD+ +I +S V S+SAF+ GGRV+D +
Subjt:  RYLDEARIEDE-YLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTGGRVLDSF

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 2

1.1e-08

43.06

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Query:  TKTKVARYLDEA---RIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF---NTGGRVLDSF
        TK+++ +YLDE+   RI++   D+LNWWK N+ +F  +S +ARDI +IP+S+V S ++     TG R+LD +
Subjt:  TKTKVARYLDEA---RIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAF---NTGGRVLDSF

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 3

9.9e-07

39.44

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Query:  TKVARYLDEA---RIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSK----SAFNTGGRVLDSF
        +++ +YL+EA   RI+D   ++L WWK N+ +F  +S++ARD+ +IP+S+V S     SA  TG ++LD +
Subjt:  TKVARYLDEA---RIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSK----SAFNTGGRVLDSF

Arabidopsis top hits

e value

%identity

Alignment

AT1G18560.1 BED zinc finger ;hAT family dimerisation domain

4.7e-04

27.03

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Query:  KQRKKTCVDDTKTKVARYLDEARIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTGGRVLD
        ++R+ +  ++   ++ +YL E+ I     D+L+WWK NS R+  +S +ARD  ++  +    +  F   G  +D
Subjt:  KQRKKTCVDDTKTKVARYLDEARIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTGGRVLD

AT3G42170.1 BED zinc finger ;hAT family dimerisation domain

6.0e-07

31.25

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Query:  PSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARI-EDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTGGRVLDSF
        P N++S   KA   + D      +T   + K+++ +YLDE  +   +  D+L+WWK N  ++  +S++ARDI SIP+S       F+   R +D +
Subjt:  PSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARI-EDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTGGRVLDSF

Sequences

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CDS sequence

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mRNA sequence

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ATGGAAGGATTTGGCTTTCAAAGTCAAAATGAAATACCTTCAAATTCATCTAGTGGATCTTATAAGGCACGTGCTGCTGTTCATGATAGATTTAAACAAAGGAAAAAAAC
ATGTGTAGATGATACTAAAACAAAGGTGGCTCGTTATCTAGATGAGGCTCGCATAGAAGATGAATATTTAGATTTGCTAAATTGGTGGAAGGCGAATTCCTCTCGATTTA
AGATCATTAGCGAAGTAGCCAGAGACATCTATAGTATTCCTATATCAATTGTCCCTTCTAAGTCAGCCTTTAACACTGGAGGACGAGTGTTAGATTCTTTTTGAAGTTCA
TTAACTCCTCAAACGACAGAGGCACTCATTTGTGCTCATAATTGGATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAGTTGATGGGGCTGAAGAAATTGACAAGGA
ATTCATAAAAATAGGAAAGGAGATGGAAGCTGCATTTGAGAATCTGAATCATGACTCTATGAATCTTAAAGCATAGTGATAGAAGGACTTTGGGTTATACAAACAAGACG
GAACGTAGACAATGCATTCAATTGTAGGCTTAAGAAAAAGCTAGGTATAATAATTTATGTAAATTGAGAACATTTTTTTGTGATTTTATGTTGTAGGAGATCTTTTATTC
TTTTTTAATGTTTTTCTTACCTTTAACAACTCCAAC

Protein sequence

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MEGFGFQSQNEIPSNSSSGSYKARAAVHDRFKQRKKTCVDDTKTKVARYLDEARIEDEYLDLLNWWKANSSRFKIISEVARDIYSIPISIVPSKSAFNTGGRVLDSF

CSPI06G10160 (gene) of Cucumber (PI 183967) v1 genome