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CSPI06G10300 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G10300
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr6:8961601..8961831
RNA-Seq ExpressionCSPI06G10300
SyntenyCSPI06G10300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063069.1 putative leucine-rich repeat-containing protein [Cucumis melo var. makuwa]9.5e-0957.75Show/hide
Query:  DGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF
        DGG  T+RVR HECEVS  +EFE F RAL  IVA DE  E   SS + K  AY EH GSSS VI   ++LF
Subjt:  DGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF

KAE8649447.1 hypothetical protein Csa_018892 [Cucumis sativus]2.0e-1162.12Show/hide
Query:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSS
        MALI DGGL TR VR HECEV   SEF+ F RALI IV  DE IED  S+ + K  AY +H GSSS
Subjt:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSS

KAE8650794.1 hypothetical protein Csa_017583, partial [Cucumis sativus]2.9e-0559.26Show/hide
Query:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTK
        MA I D G  T  VR  ECEVS  S+FE FGRAL  +VAADE  ED  SS +TK
Subjt:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTK

KGN46724.1 hypothetical protein Csa_020938 [Cucumis sativus]1.2e-3090.79Show/hide
Query:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF
        MALIGDGGLPTRRVRYHECEVSI SEFE+FGRALI IV  DEFIEDDSSSRKTKPDAYVEH GSSSYVIP DNNLF
Subjt:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF

TYK16282.1 hypothetical protein E5676_scaffold21G00530 [Cucumis melo var. makuwa]2.3e-1059.21Show/hide
Query:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF
        MA I DGG  T+ VR HECEVS  SEFE F RAL  IVA DE  E   SS + K  AYVEH GSS YVI   ++LF
Subjt:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF

TrEMBL top hitse value%identityAlignment
A0A0A0KCZ9 Uncharacterized protein5.6e-3190.79Show/hide
Query:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF
        MALIGDGGLPTRRVRYHECEVSI SEFE+FGRALI IV  DEFIEDDSSSRKTKPDAYVEH GSSSYVIP DNNLF
Subjt:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF

A0A0A0L8S2 Uncharacterized protein1.0e-0858.73Show/hide
Query:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLG
        MA I D G  T  VR  ECEVS  S+FE FGRAL  +VAADE  ED  SS +TK  AY EH G
Subjt:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLG

A0A5A7VBT6 Putative leucine-rich repeat-containing protein4.6e-0957.75Show/hide
Query:  DGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF
        DGG  T+RVR HECEVS  +EFE F RAL  IVA DE  E   SS + K  AY EH GSSS VI   ++LF
Subjt:  DGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF

A0A5D3CXM9 Uncharacterized protein1.1e-1059.21Show/hide
Query:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF
        MA I DGG  T+ VR HECEVS  SEFE F RAL  IVA DE  E   SS + K  AYVEH GSS YVI   ++LF
Subjt:  MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGATTGGGGATGGTGGGTTACCAACTCGAAGGGTAAGGTATCATGAATGCGAAGTATCCATTTGTAGTGAGTTCGAGAATTTTGGGAGAGCCCTTATCGGTAT
TGTTGCTGCAGATGAATTTATTGAAGATGACTCTTCCAGTAGGAAGACAAAGCCTGATGCATATGTCGAGCATCTAGGATCATCATCTTATGTTATTCCATACGACAACA
ATCTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGATTGGGGATGGTGGGTTACCAACTCGAAGGGTAAGGTATCATGAATGCGAAGTATCCATTTGTAGTGAGTTCGAGAATTTTGGGAGAGCCCTTATCGGTAT
TGTTGCTGCAGATGAATTTATTGAAGATGACTCTTCCAGTAGGAAGACAAAGCCTGATGCATATGTCGAGCATCTAGGATCATCATCTTATGTTATTCCATACGACAACA
ATCTCTTCTGA
Protein sequenceShow/hide protein sequence
MALIGDGGLPTRRVRYHECEVSICSEFENFGRALIGIVAADEFIEDDSSSRKTKPDAYVEHLGSSSYVIPYDNNLF