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CSPI06G11140 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G11140
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibosomal_S7 domain-containing protein
Genome locationChr6:9730965..9732075
RNA-Seq ExpressionCSPI06G11140
SyntenyCSPI06G11140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EDS20212.1 hypothetical protein CLOSS21_02654 [Clostridium sp. SS2/1]8.5e-0460Show/hide
Query:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLATKHNGCTLCTT
        C PGHKGHDDLTSS PSS L   V     P  LATK  GC  C T
Subjt:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLATKHNGCTLCTT

GFR72343.1 hypothetical protein ElyMa_003838100 [Elysia marginata]5.0e-0444.44Show/hide
Query:  PHLSSVTGLPLASPSCSELQPTIRINDGFLDTCCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLATKHNGC
        P+ S V GL    P  S L   +         C PG KGHDDLTSS PSSGL P V     P+ L T+  GC
Subjt:  PHLSSVTGLPLASPSCSELQPTIRINDGFLDTCCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLATKHNGC

KAA0068048.1 hypothetical protein E6C27_scaffold138G002460 [Cucumis melo var. makuwa]4.5e-0582.35Show/hide
Query:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLA
        C PGHKGHDDLTSSSPSSGL P V S FQPQR A
Subjt:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLA

KAF1855122.1 hypothetical protein Lal_00044196 [Lupinus albus]5.0e-0481.25Show/hide
Query:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQR
        C PGHKGHDDLTSSSPSSGL P V S FQ QR
Subjt:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQR

TrEMBL top hitse value%identityAlignment
A0A5A7VJP9 Uncharacterized protein2.2e-0582.35Show/hide
Query:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLA
        C PGHKGHDDLTSSSPSSGL P V S FQPQR A
Subjt:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLA

A0A6A5L917 Uncharacterized protein2.4e-0481.25Show/hide
Query:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQR
        C PGHKGHDDLTSSSPSSGL P V S FQ QR
Subjt:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQR

A0A6N2ND82 Ribosomal_S7 domain-containing protein3.1e-0761.02Show/hide
Query:  LASPSCSELQPTIRINDGFLD--------TCCPG--HKGHDDLTSSSPSSGLPPTVYSR
        LA P+  ELQP IR  DGFL+        T CPG  HKGHDDLTSSSPSSGL P V+ R
Subjt:  LASPSCSELQPTIRINDGFLD--------TCCPG--HKGHDDLTSSSPSSGLPPTVYSR

A0A7J6I733 Uncharacterized protein9.2e-0473.53Show/hide
Query:  PGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLATK
        PGHK HDDLTSSSPSSGL P VYS FQ Q L  +
Subjt:  PGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLATK

B0P4F9 Uncharacterized protein4.1e-0460Show/hide
Query:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLATKHNGCTLCTT
        C PGHKGHDDLTSS PSS L   V     P  LATK  GC  C T
Subjt:  CCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLATKHNGCTLCTT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTGAGCTCAATCAGATTCTGGTGGCTAAAAGATCTGACAATCTCAGCACTAATCTAGGTCTTCCTACACATAATTGGAGGAGCCAGACCAGGGTGGAAGGGAA
GTCTTTTCTCTGTGTGTGGAAAGGAAGTTCTTATCAAGAGTTGGAGGATGTTGTGTCTCAACAAAGTGGTTTGGGAGATGCTGTTCAAAGAATTAAGCTTTTTCAAAGTG
GGAGATTATCAGGAAATCTAGCCAAAGATGAAATCTCACTATGCACCCTCTCCCTACCCCTAAAAACCTGCCCATGCCTCTCACCTCAAATGTCCCAAACAATAGCACAC
ACTCCAGCCACCCATAGAAAGCCCCATTTATCTTCCGTCACTGGCCTGCCTTTGGCATCTCCCTCCTGCAGCGAGTTGCAACCAACAATCCGAATTAATGACGGGTTTTT
GGACACGTGTTGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCTGGCTTACCGCCGACAGTCTACTCAAGGTTCCAACCTCAACGATTGGCAA
CTAAACACAATGGTTGCACTCTATGCACCACCTGTGCCCATGTTCCCAAAGGCACCCCTCTATCGGCAGATGGAGAAGGACTCCTCGATCATCGCTTTGACACTCCTAGA
GCCAGCAAAACTGACACCAAACACTTACAGGAAAGAGCTCCACACTACCCTCACATAATGGCAGTATGTCCCAAAAAAGATGAACAAGATCTTCCTCCGCCTTCTGACAA
AGCATGCAGCAAAAAAGGTCGACAAGAGAAGTCCTCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTGAGCTCAATCAGATTCTGGTGGCTAAAAGATCTGACAATCTCAGCACTAATCTAGGTCTTCCTACACATAATTGGAGGAGCCAGACCAGGGTGGAAGGGAA
GTCTTTTCTCTGTGTGTGGAAAGGAAGTTCTTATCAAGAGTTGGAGGATGTTGTGTCTCAACAAAGTGGTTTGGGAGATGCTGTTCAAAGAATTAAGCTTTTTCAAAGTG
GGAGATTATCAGGAAATCTAGCCAAAGATGAAATCTCACTATGCACCCTCTCCCTACCCCTAAAAACCTGCCCATGCCTCTCACCTCAAATGTCCCAAACAATAGCACAC
ACTCCAGCCACCCATAGAAAGCCCCATTTATCTTCCGTCACTGGCCTGCCTTTGGCATCTCCCTCCTGCAGCGAGTTGCAACCAACAATCCGAATTAATGACGGGTTTTT
GGACACGTGTTGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCTGGCTTACCGCCGACAGTCTACTCAAGGTTCCAACCTCAACGATTGGCAA
CTAAACACAATGGTTGCACTCTATGCACCACCTGTGCCCATGTTCCCAAAGGCACCCCTCTATCGGCAGATGGAGAAGGACTCCTCGATCATCGCTTTGACACTCCTAGA
GCCAGCAAAACTGACACCAAACACTTACAGGAAAGAGCTCCACACTACCCTCACATAATGGCAGTATGTCCCAAAAAAGATGAACAAGATCTTCCTCCGCCTTCTGACAA
AGCATGCAGCAAAAAAGGTCGACAAGAGAAGTCCTCTTCCTAA
Protein sequenceShow/hide protein sequence
MTSELNQILVAKRSDNLSTNLGLPTHNWRSQTRVEGKSFLCVWKGSSYQELEDVVSQQSGLGDAVQRIKLFQSGRLSGNLAKDEISLCTLSLPLKTCPCLSPQMSQTIAH
TPATHRKPHLSSVTGLPLASPSCSELQPTIRINDGFLDTCCPGHKGHDDLTSSSPSSGLPPTVYSRFQPQRLATKHNGCTLCTTCAHVPKGTPLSADGEGLLDHRFDTPR
ASKTDTKHLQERAPHYPHIMAVCPKKDEQDLPPPSDKACSKKGRQEKSSS