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CSPI06G11970 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G11970
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionCyclin-dependent kinases regulatory subunit
Genome locationChr6:10527568..10529694
RNA-Seq ExpressionCSPI06G11970
SyntenyCSPI06G11970
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AES88520.1 transmembrane protein, putative [Medicago truncatula]8.3e-2888.41Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        M+RRRNL+VA GL+AFASAG+AFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRD+GPDH+TY KK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
XP_004145769.1 uncharacterized protein LOC101222012 [Cucumis sativus]1.8e-30100Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
XP_008465426.1 PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo]6.8e-3098.55Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPL PQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
XP_022140323.1 uncharacterized protein LOC111011024 [Momordica charantia]6.4e-2892.75Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRN+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPL PQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
XP_038900698.1 uncharacterized protein LOC120087838 [Benincasa hispida]8.3e-2892.75Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNLIVA+GLIAFASAGLAFPFYMASSKKPVID  KPL PQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
TrEMBL top hitse value%identityAlignment
A0A1S3CQB9 uncharacterized protein LOC1035030423.3e-3098.55Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPL PQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
A0A396I4S6 Uncharacterized protein4.0e-2888.41Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        M+RRRNL+VA GL+AFASAG+AFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRD+GPDH+TY KK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1CHR8 uncharacterized protein LOC1110110243.1e-2892.75Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRN+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPL PQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
A0A7J6H6B5 Uncharacterized protein9.0e-2889.86Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        M+R RN+IVA GL+AFASAGLAFPFYMAS+K PVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
G7JM87 Transmembrane protein, putative4.0e-2888.41Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        M+RRRNL+VA GL+AFASAG+AFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRD+GPDH+TY KK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G22875.1 unknown protein1.0e-2882.61Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        M   RN++VA GL+ FASAGLAFPFYMASSK+PVIDPTKPL PQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
AT5G22875.2 unknown protein1.0e-2882.61Show/hide
Query:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK
        M   RN++VA GL+ FASAGLAFPFYMASSK+PVIDPTKPL PQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACGGCGTCGGAATTTGATTGTTGCCGTTGGGCTGATAGCCTTTGCATCTGCTGGATTAGCATTTCCCTTTTACATGGCGTCTTCGAAAAAACCAGTTATAGATCC
GACAAAGCCGCTTTCGCCGCAGGCCACTTTTCGAGGTCCTTATATTAACACTGGCTCCCGAGACGTTGGACCCGACCATCAAACTTACACCAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
CTCTTTCCCATTGTTTTTTTGGTCTAATGAAATTTATTGAGAAAAAAATAAATTGGATATTGGTGGAATTTGTTTTTTTTGGATTGTGCACTCTATCATGTTCTTCTTCT
TCAATACGAACTTTAATGAAAATTGATCCAATCCGAACCGAACCAAATCAAACCAATCCGGTTCGCTTTTTTACACCAGTATTTACAATTTAATTTCCAGCCGGGGCCTG
GAATGGTTTAGGGCTGAACCCCTTGGATCAACAATTTCCGTATCAGGTCCCATTGTTCTCTCTTTGAAGAACCTCCTCTTCACTTCATTCGCTTATTCCTCTCATCCCCA
AATTCCTTCGTTCACTCATAGAAAACTTGATGACACGGCGTCGGAATTTGATTGTTGCCGTTGGGCTGATAGCCTTTGCATCTGCTGGATTAGCATTTCCCTTTTACATG
GCGTCTTCGAAAAAACCAGTTATAGATCCGACAAAGCCGCTTTCGCCGCAGGCCACTTTTCGAGGTCCTTATATTAACACTGGCTCCCGAGACGTTGGACCCGACCATCA
AACTTACACCAAGAAGTGATTTCTTTTGAATCGTGCTTGGTTTTGCAAATCTATCTGTTGGTTTATTTCAATGTAGAAGAAGACTACGTGAATTTTTCTTCTTCTCTCTT
ATGGAGAAACAGTTGAGTAGTTCACTTGATTTCCAAATCAAATCTTTGTAGATTAAAATATTGATGTCTTATAAAGGCATTGGGGTTTTAATTTCATGGATATATATCAA
CAAACTTATGGATATTTATGTAAA
Protein sequenceShow/hide protein sequence
MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVGPDHQTYTKK