CuGenDBv2

Gene ID	CSPI06G11990
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Cyclin-dependent kinases regulatory subunit
Genome location	Chr6:10532194..10533009
RNA-Seq Expression	CSPI06G11990
Synteny	CSPI06G11990
Gene Ontology terms	GO:0007346 - regulation of mitotic cell cycle (biological process) GO:0045737 - positive regulation of cyclin-dependent protein serine/threonine kinase activity (biological process) GO:0051301 - cell division (biological process) GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0016301 - kinase activity (molecular function) GO:0019901 - protein kinase binding (molecular function) GO:0042393 - histone binding (molecular function) GO:0043130 - ubiquitin binding (molecular function) GO:0061575 - cyclin-dependent protein serine/threonine kinase activator activity (molecular function)
InterPro domains	IPR000789 - Cyclin-dependent kinase, regulatory subunit IPR036858 - Cyclin-dependent kinase, regulatory subunit superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KGN46891.1 hypothetical protein Csa_021096 [Cucumis sativus]

4.9e-40

98.75

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Query:  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFH PEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK

XP_008465423.1 PREDICTED: cyclin-dependent kinases regulatory subunit 1-like [Cucumis melo]

7.6e-33

97.22

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK

XP_011657043.1 LOW QUALITY PROTEIN: cyclin-dependent kinases regulatory subunit 1 [Cucumis sativus]

2.6e-33

98.61

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFH PEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK

XP_028756892.1 cyclin-dependent kinases regulatory subunit 1 [Prosopis alba]

7.1e-31

91.67

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLNYQQQQEN+ QQN +AAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK

XP_038902899.1 cyclin-dependent kinases regulatory subunit 1-like [Benincasa hispida]

5.5e-31

93.06

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLNYQQQQEN  QQN LAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KGK5 Cyclin-dependent kinases regulatory subunit

2.4e-40

98.75

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Query:  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFH PEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK

A0A1S3CNU7 Cyclin-dependent kinases regulatory subunit

3.7e-33

97.22

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK

A0A2I4GKZ4 Cyclin-dependent kinases regulatory subunit

3.4e-31

94.29

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALA
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLNYQQQQEN+TQQN LA
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALA

A0A5D3DKQ6 Cyclin-dependent kinases regulatory subunit

3.7e-33

97.22

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK

A0A6J1K8L9 Cyclin-dependent kinases regulatory subunit

5.9e-31

91.67

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK
        RHVVLPP+VAKL PKNRLLSENEWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLNYQQQQEN  QQN LAAK
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK

SwissProt top hits

e value

%identity

Alignment

A2XCH8 Cyclin-dependent kinases regulatory subunit 1

4.1e-29

95.08

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQE
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLN+QQQQE
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQE

O23249 Cyclin-dependent kinases regulatory subunit 1

9.7e-31

93.85

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQ
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLNYQQQQEN+ Q
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQ

P55933 Probable cyclin-dependent kinases regulatory subunit

9.1e-21

80.77

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRR
        RHV+LPP+VAK  PKNRLLSE EWR +GVQQS+GWVHYA HRPEPHI+LFRR
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRR

Q6PS57 Cyclin-dependent kinases regulatory subunit 1

4.1e-29

95.08

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQE
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLN+QQQQE
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQE

Q9SJJ5 Cyclin-dependent kinases regulatory subunit 2

1.7e-27

88.52

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQE
        RHVVLPPEVAKL PKNR+LSE+EWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLNYQQ+ +
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQE

Arabidopsis top hits

e value

%identity

Alignment

AT2G27960.1 cyclin-dependent kinase-subunit 1

6.9e-32

93.85

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQ
        RHVVLPPEVAKL PKNRLLSENEWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLNYQQQQEN+ Q
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQ

AT2G27970.1 CDK-subunit 2

1.2e-28

88.52

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Query:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQE
        RHVVLPPEVAKL PKNR+LSE+EWRAIGVQQSRGWVHYA HRPEPHIMLFRRPLNYQQ+ +
Subjt:  RHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQE

Sequences

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CDS sequence

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ATGTCTAATTGGATTGATTGGTGCAGACACGTGGTTCTCCCACCCGAAGTGGCAAAGTTGTTTCCTAAGAATCGTCTGCTCTCGGAAAATGAATGGCGTGCAATTGGAGT
CCAGCAGAGTCGTGGGTGGGTGCACTATGCTTTTCATCGTCCCGAACCTCATATCATGCTATTCAGGAGGCCCCTGAACTACCAACAGCAGCAGGAGAATCGCACTCAAC
AAAATGCACTTGCTGCTAAATGA

mRNA sequence

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Protein sequence

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MSNWIDWCRHVVLPPEVAKLFPKNRLLSENEWRAIGVQQSRGWVHYAFHRPEPHIMLFRRPLNYQQQQENRTQQNALAAK

CSPI06G11990 (gene) of Cucumber (PI 183967) v1 genome