; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G12230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G12230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionhistone deacetylase HDT1-like
Genome locationChr6:10728035..10731174
RNA-Seq ExpressionCSPI06G12230
SyntenyCSPI06G12230
Gene Ontology termsGO:0010162 - seed dormancy process (biological process)
GO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005730 - nucleolus (cellular component)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR041232 - Nucleoplasmin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033373.1 histone deacetylase HDT1-like [Cucumis melo var. makuwa]1.5e-10479.67Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGN-----------------
        GVEVKPGQ LSVQPGDMNYVHLSQATLGDLKKDKAN+PVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG+                 
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGN-----------------

Query:  -------SDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDS-DSDDEDDGTD
               SDFGSEDEELG+LSAENGK S+KEKSIGGKIFGLKPESSKKADAKSI PSKEEDDDSEDDDSSDEGSDSD+ SDEEML GDS DSD+EDD ++
Subjt:  -------SDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDS-DSDDEDDGTD

Query:  SEEETPKKVNESSKKRSNESASKTP--VSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSP-GKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK
        S+EETPKKV ES+KKR NESA+KT    +KK KLA+ EKTDSKKGGHTATPHPAKK  K+P  K ETPKSGGQFSC SCDRSF SDGALQSHSKAKH AK
Subjt:  SEEETPKKVNESSKKRSNESASKTP--VSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSP-GKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK

XP_004145781.1 histone deacetylase HDT1 [Cucumis sativus]5.9e-13092.47Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------
        GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG                  
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------

Query:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET
          +SDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET
Subjt:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET

Query:  PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK
        PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKH AK
Subjt:  PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK

XP_008458624.1 PREDICTED: histone deacetylase HDT1-like [Cucumis melo]1.7e-12188.01Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------
        GVEVKPGQ LSVQPGDMNYVHLSQATLGDLKKDKAN+PVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG                  
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------

Query:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET
          +SDFGSEDEELG+LSAENGK S+KEKSIGGKIFGLKPESSKKADAKSI PSKEEDDDSEDDDSSDEGSDSD+ SDEEML GDSDSDDED+GTDSEEET
Subjt:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET

Query:  PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK
        PKKVNESSKKRSNESASKTPVSKK KLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSC +CDRSFGSDGALQSHSKAKH AK
Subjt:  PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK

XP_022140604.1 histone deacetylase HDT1-like [Momordica charantia]3.7e-10075.09Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------
        GVEVKPGQ L+V+PGD  Y+HLSQATLG++KKDKANE VTIFLKI DQKLVLGVLSA+KFPQ+SFDLVFEKEFELSHNGK G                  
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------

Query:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKE-EDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE
          +SDFGSEDEEL +  A+NGK S+KEK+I  K+  +KPESSKKAD K + PSKE EDDDSEDDD SDE  DSDD SDEEMLG DSDSDDEDDGT+S+EE
Subjt:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKE-EDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE

Query:  TPKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK
        TPKKV ES+KKRSN+SASKTP+SKK KLASAEKTD+KKGGHTATPHPAKKPAK+ GK ETPKSGGQFSC SCD+SFGSDGALQSHSKAKH+ K
Subjt:  TPKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK

XP_038900401.1 histone deacetylase HDT1-like [Benincasa hispida]1.2e-9875.34Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------
        GVEVKPGQ LSV+PGD   VHLSQATLG+LKKDKANEPVT+FLKI+DQKLVLG+LSA+KFPQI+FDLVFEK+FEL HNGK G                  
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------

Query:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET
          +SDFGSEDEEL +  AENGK S+KEKS+ GKIF LKPESSKKAD KS+ PSK + DDSEDDD SDE  DSDD SDEEMLG DS SD+EDDGTDS+EET
Subjt:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET

Query:  PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK
        PKKV +  KKR NESASKTPVSKK KLASAEKT+SKKGGHTATPHPAKK  K+PGKAETPKS GQFSC SCDRSFGSDGALQSHSKAKH  K
Subjt:  PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK

TrEMBL top hitse value%identityAlignment
A0A0A0KGM8 Histone deacetylase 2a2.9e-13092.47Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------
        GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG                  
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------

Query:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET
          +SDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET
Subjt:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET

Query:  PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK
        PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKH AK
Subjt:  PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK

A0A1S3C9I3 histone deacetylase HDT1-like8.4e-12288.01Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------
        GVEVKPGQ LSVQPGDMNYVHLSQATLGDLKKDKAN+PVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG                  
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------

Query:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET
          +SDFGSEDEELG+LSAENGK S+KEKSIGGKIFGLKPESSKKADAKSI PSKEEDDDSEDDDSSDEGSDSD+ SDEEML GDSDSDDED+GTDSEEET
Subjt:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEET

Query:  PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK
        PKKVNESSKKRSNESASKTPVSKK KLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSC +CDRSFGSDGALQSHSKAKH AK
Subjt:  PKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK

A0A5A7SSE8 Histone deacetylase HDT1-like7.1e-10579.67Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGN-----------------
        GVEVKPGQ LSVQPGDMNYVHLSQATLGDLKKDKAN+PVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG+                 
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGN-----------------

Query:  -------SDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDS-DSDDEDDGTD
               SDFGSEDEELG+LSAENGK S+KEKSIGGKIFGLKPESSKKADAKSI PSKEEDDDSEDDDSSDEGSDSD+ SDEEML GDS DSD+EDD ++
Subjt:  -------SDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDS-DSDDEDDGTD

Query:  SEEETPKKVNESSKKRSNESASKTP--VSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSP-GKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK
        S+EETPKKV ES+KKR NESA+KT    +KK KLA+ EKTDSKKGGHTATPHPAKK  K+P  K ETPKSGGQFSC SCDRSF SDGALQSHSKAKH AK
Subjt:  SEEETPKKVNESSKKRSNESASKTP--VSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSP-GKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK

A0A6J1CG52 histone deacetylase HDT1-like1.8e-10075.09Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------
        GVEVKPGQ L+V+PGD  Y+HLSQATLG++KKDKANE VTIFLKI DQKLVLGVLSA+KFPQ+SFDLVFEKEFELSHNGK G                  
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------

Query:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKE-EDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE
          +SDFGSEDEEL +  A+NGK S+KEK+I  K+  +KPESSKKAD K + PSKE EDDDSEDDD SDE  DSDD SDEEMLG DSDSDDEDDGT+S+EE
Subjt:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKE-EDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE

Query:  TPKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK
        TPKKV ES+KKRSN+SASKTP+SKK KLASAEKTD+KKGGHTATPHPAKKPAK+ GK ETPKSGGQFSC SCD+SFGSDGALQSHSKAKH+ K
Subjt:  TPKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK

A0A6J1FXQ5 histone deacetylase HDT1-like4.3e-9473.04Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------
        GVEVKPGQ LSVQPGD  Y+HLSQATLG+LKKDKANE VTIF+KI DQKLVLG+LSA+KFPQ+SFDLVFEKEFELSHNGK G                  
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------

Query:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEE-DDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE
          +SDFGSEDEEL +   +NGK S++EKSI GK       +SKK + KS+ PSKEE DDDSEDDD SDE  DSDD SDEEMLG DSDSDDEDDGT+SEEE
Subjt:  --NSDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEE-DDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE

Query:  TPKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK
        TPKKV ES+KKR NESASKTPVSKK K+ASAEKT SKKGGHT TPHPAKKP K+P KAETPKS GQ SC SCDRSFGSD ALQSHSKAKH  K
Subjt:  TPKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK

SwissProt top hitse value%identityAlignment
O24591 Histone deacetylase HDT13.4e-3543.87Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------
        G+EVKPG  +  +PG    +HLSQA LG+ KK   ++   +++KIDDQKL +G LS DK P I FDL+F+KEFELSH  K                    
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------

Query:  NSDFGSEDEELGM-LSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSK--EEDDDSEDDDSSDEGSDSDDVSDEEMLG--GDSDSDDEDDGTDSE
        + D   EDEEL + +  ENGKA EK++           E +  A +KS   SK  ++DDDS++D++ D   D  D SDE +    GD DS DEDD +D E
Subjt:  NSDFGSEDEELGM-LSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSK--EEDDDSEDDDSSDEGSDSDDVSDEEMLG--GDSDSDDEDDGTDSE

Query:  EE---TPKKVNESSKKRSNESASKTPVS-KKTKLA--SAEKTDSKKGG--HTATPHPAK--------KPAKSPGKAETPKSGGQFSCTSCDRSFGSDGAL
        EE   TPKK     K+ +  S  KTP+S KK K+A  S++KT  KKG   H ATPHPAK        K  KSP  A  PKSGG   C  C +SF S+ AL
Subjt:  EE---TPKKVNESSKKRSNESASKTPVS-KKTKLA--SAEKTDSKKGG--HTATPHPAK--------KPAKSPGKAETPKSGGQFSCTSCDRSFGSDGAL

Query:  QSHSKAKHSA
        Q+HS+AK  A
Subjt:  QSHSKAKHSA

Q6V9I6 Histone deacetylase HDT19.1e-4947.26Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGN-----------------
        G EVK G+PL+VQPGD   +HLSQA+LG+LKKDK +E V + + ID +KLVLG L+++K PQ  FDLVF+++FELSHN K G+                 
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGN-----------------

Query:  --SDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEETP
           D+   DE++ +  A +GK   KE    GK    K  +S K   + + P+K+++D+S DDD SD G                  +DEDD  DSEEETP
Subjt:  --SDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEETP

Query:  KKVNESSKKRSNESASKTPVS-KKTKLASAEKTDSKK-GGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSA
        KK  E +K+R  +SA+KTPV+ KK KL + +KTD KK GGH ATPHP+K+ +K      TPKS G   C  C+RSFGS+GAL SHSKAKHSA
Subjt:  KKVNESSKKRSNESASKTPVS-KKTKLASAEKTDSKK-GGHTATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSA

Q8LJS2 Histone deacetylase HDT15.5e-4646.64Show/hide
Query:  GVEVKPGQPLSVQPGDM--NYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKG------------GN---
        GVEVK GQ ++V P D   +Y+H+SQ  LG+ KKDK NEPV ++LK+ +QK+VLG LS D  P +S DLV + + ELSH  K             GN   
Subjt:  GVEVKPGQPLSVQPGDM--NYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKG------------GN---

Query:  ---SDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKK---ADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSE
           SD   EDEEL +   +NGK   K +  G K+   KP  S     A AK+  P K+EDDDS DD+S D+ +  D+    + +  DS+S++E DG D  
Subjt:  ---SDFGSEDEELGMLSAENGKASEKEKSIGGKIFGLKPESSKK---ADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSE

Query:  EETPKKVNESSKKRSNESASKTPVS-KKTKLASAEKTDSKKGGHTATPHPAKKPAKSPG--KAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK
        EETP K  +  KKR NESA+KTP+S KK K A+ EKTD KK  H ATPHP+KK  K+P   K +TP S GQ SC SC +SF ++  LQ H KAKH  +
Subjt:  EETPKKVNESSKKRSNESASKTPVS-KKTKLASAEKTDSKKGGHTATPHPAKKPAKSPG--KAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK

Q9M4U4 Histone deacetylase HDT32.2e-3444.48Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------
        G+EVKPG  +  +PG    +HLSQA LG+ KK   ++   +++KIDDQKL +G LS DK P I FDL+F+KEFELSH  K                    
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGG------------------

Query:  NSDFGSEDEELGMLSA-ENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDD-VSDEEMLGGDSDSDDEDDGTDSEEE-
        + D   EDEEL + +  ENGKA EK++    K      +SS   D+K      + D+D  DD   DE  DSD+ +S EE   GD DS DEDD +D EEE 
Subjt:  NSDFGSEDEELGMLSA-ENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDD-VSDEEMLGGDSDSDDEDDGTDSEEE-

Query:  --TPKKVNESSKKRSNESASKTPVS-KKTKLA--SAEKTDSKKGG--HTATPHPAK--------KPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSH
          TPKK     K+ +  S  KTP+S KK K+A  S++KT  KKG   H ATPHPAK        K  KSP  A  PKSG    C SC +SF S+ A Q+H
Subjt:  --TPKKVNESSKKRSNESASKTPVS-KKTKLA--SAEKTDSKKGG--HTATPHPAK--------KPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSH

Query:  SKAKHSAK
        SKAKH  K
Subjt:  SKAKHSAK

Q9M4U5 Histone deacetylase HDT21.9e-3844.88Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGK----------------GGNS
        G+EVKPG  +  +PG    +H+SQA LG+ KK   ++   +++K+DD+KL +G LS DK+PQI FDLVF KEFELSH  K                G   
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGK----------------GGNS

Query:  DFGSEDEELGM---LSAENGKA--SEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE
        D  SEDEE  +   +  ENGKA   E++K+    +     +SS   + KS   S + D+D  DD   D+  DSD+        GD DS DEDD +D +EE
Subjt:  DFGSEDEELGM---LSAENGKA--SEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE

Query:  ---TPKKVNESSKKRSNESASKTPVS-KKTKLAS--AEKTDSKKGG-HTATPHPA--KKPAKSPGKAE-TPKSGGQFSCTSCDRSFGSDGALQSHSKAKH
           TPKK  E+ KKR  E+A KTP+S KK K+A+  A+KT  KKG  H ATPHPA  K PA +    E +PKSGG   C SC ++F S+ ALQ+HSKAKH
Subjt:  ---TPKKVNESSKKRSNESASKTPVS-KKTKLAS--AEKTDSKKGG-HTATPHPA--KKPAKSPGKAE-TPKSGGQFSCTSCDRSFGSDGALQSHSKAKH

Query:  SAK
         AK
Subjt:  SAK

Arabidopsis top hitse value%identityAlignment
AT3G44750.1 histone deacetylase 36.9e-2839.57Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHN-GKGGNSDFGSEDEELGMLSAE
        G+EVK G+P++V P +   +H+SQA+LG+  K+K  E V + +K+ +Q LVLG LS +  PQ+  DLVF+KEFELSH  GKG     G +   +      
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHN-GKGGNSDFGSEDEELGMLSAE

Query:  NGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE--TPKKVNESSKKRSNESAS
          +  E+E+   G     K  +  KA    + P+ ++++D  D D  DE                    D+ DG DSEEE  TPKK   SSKKR+NE+  
Subjt:  NGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE--TPKKVNESSKKRSNESAS

Query:  KTPVS-KKTKLA-SAEKTDSKKGGHTATPHPAKKPAKSPGKA--ETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSA
        K PVS KK K+A + +KTD KK G               GKA  ++PKS  Q SC SC ++F S  AL+SH+KAKH+A
Subjt:  KTPVS-KKTKLA-SAEKTDSKKGGHTATPHPAKKPAKSPGKA--ETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSA

AT3G44750.2 histone deacetylase 32.6e-2739.57Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHN-GKGGNSDFGSEDEELGMLSAE
        G+EVK G+P++V P +   +H+SQA+LG+  K+K  E V + +K+ +Q LVLG LS +  PQ+  DLVF+KEFELSH  GKG     G +   +      
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHN-GKGGNSDFGSEDEELGMLSAE

Query:  NGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE--TPKKVNESSKKRSNESAS
         G + E+E+ +       K  +  KA    + P+ ++++D  D D  DE                    D+ DG DSEEE  TPKK   SSKKR+NE+  
Subjt:  NGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEE--TPKKVNESSKKRSNESAS

Query:  KTPVS-KKTKLA-SAEKTDSKKGGHTATPHPAKKPAKSPGKA--ETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSA
        K PVS KK K+A + +KTD KK G               GKA  ++PKS  Q SC SC ++F S  AL+SH+KAKH+A
Subjt:  KTPVS-KKTKLA-SAEKTDSKKGGHTATPHPAKKPAKSPGKA--ETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSA

AT5G03740.1 histone deacetylase 2C2.9e-3440.41Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGNSDFGS--------EDEE
        GVEVK G+PL + PG    VH+SQ  LG+  K+   EP+ +++ +   KL++G LS +KFPQ+S ++V E+ F LSH  K G+  F          E E+
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGNSDFGS--------EDEE

Query:  L--GMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEETPKKVNESSKK
        L    L A   KA+   KS   ++    P    KA     A   EE D S+DDDS + G + ++    E    + DS D+++   SEEETPKK  E  K+
Subjt:  L--GMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEETPKKVNESSKK

Query:  RSNESASKTPVS-KKTKLASAEKTDSKKGG-HTATPHPAKKPAKSPG---------KAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSA
         +  ++SK P S KK K  + +KTDSKK   H ATPHP+K+  K+ G         + +TPKS G F C SC R+F S+  LQSH+KAKHSA
Subjt:  RSNESASKTPVS-KKTKLASAEKTDSKKGG-HTATPHPAKKPAKSPG---------KAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSA

AT5G22650.1 histone deacetylase 2B4.3e-3044.56Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGN-------------SDFG
        GV V P     V P + + VH+SQA+L      K+ E V + + +   KLV+G LS DKFPQISFDLVF+KEFELSH+G   N              DF 
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGN-------------SDFG

Query:  SEDEE----------------LGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDED
        S D+E                 G   A   KA  K K+        KP   K A+ K   P  +E+D+S+D+D S+E  DS+   D +    DSD D+E+
Subjt:  SEDEE----------------LGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDED

Query:  DGTD-SEEETPKKVNESSKKRSNESASKTPVS-KKTKLASA-----EKT-DSKKGGHTATPHPAKKPAKSPGKA-ETPKSGGQFS
        D  D  EEETPKK    +KKR NES SKTPVS KK K A+A     +KT + KKGGHTATPHPAKK  KSP  A ++PKSGGQ S
Subjt:  DGTD-SEEETPKKVNESSKKRSNESASKTPVS-KKTKLASA-----EKT-DSKKGGHTATPHPAKKPAKSPGKA-ETPKSGGQFS

AT5G22650.2 histone deacetylase 2B1.8e-3144.72Show/hide
Query:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGN-------------SDFG
        GV V P     V P + + VH+SQA+L      K+ E V + + +   KLV+G LS DKFPQISFDLVF+KEFELSH+G   N              DF 
Subjt:  GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGN-------------SDFG

Query:  SEDEE----------------LGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDED
        S D+E                 G   A   KA  K K+        KP   K A+ K   P  +E+D+S+D+D S+E  DS+   D +    DSD D+E+
Subjt:  SEDEE----------------LGMLSAENGKASEKEKSIGGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDED

Query:  DGTD-SEEETPKKVNESSKKRSNESASKTPVS-KKTKLASA-----EKTDSKKGGHTATPHPAKKPAKSPGKA-ETPKSGGQFS
        D  D  EEETPKK    +KKR NES SKTPVS KK K A+A     +KT+ KKGGHTATPHPAKK  KSP  A ++PKSGGQ S
Subjt:  DGTD-SEEETPKKVNESSKKRSNESASKTPVS-KKTKLASA-----EKTDSKKGGHTATPHPAKKPAKSPGKA-ETPKSGGQFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTGTTGAAGTTAAGCCTGGTCAGCCACTCTCTGTGCAGCCTGGTGACATGAACTATGTGCATCTATCACAGGCGACTCTAGGTGATTTGAAGAAGGACAAAGCAAATGA
ACCCGTGACTATTTTTTTGAAAATCGATGACCAGAAGCTTGTTCTGGGAGTTCTCTCTGCCGACAAGTTCCCTCAGATATCATTTGATCTCGTGTTTGAGAAGGAATTTG
AGCTCTCTCACAATGGAAAGGGTGGAAATTCTGATTTTGGCTCGGAGGATGAGGAACTCGGAATGCTATCTGCTGAGAATGGAAAAGCTAGCGAGAAGGAGAAGTCTATT
GGTGGAAAAATTTTTGGTCTGAAACCCGAATCTTCAAAGAAAGCAGATGCTAAGTCTATTGCGCCGAGCAAGGAAGAAGATGATGACTCCGAAGATGATGACTCATCTGA
TGAGGGTTCAGATTCCGATGATGTGTCTGATGAGGAAATGCTTGGGGGAGACAGTGACTCTGACGATGAAGATGATGGTACTGACAGTGAGGAGGAGACACCAAAGAAGG
TTAATGAATCCTCCAAGAAGAGGTCAAACGAGTCTGCCTCCAAAACCCCTGTTTCTAAGAAGACAAAGTTAGCTTCTGCTGAGAAAACTGATTCGAAGAAGGGAGGCCAT
ACAGCCACTCCCCATCCTGCCAAGAAACCTGCGAAATCTCCTGGCAAAGCAGAGACCCCTAAATCAGGAGGCCAGTTTTCTTGCACATCCTGCGATAGGTCATTTGGTTC
TGATGGTGCTCTCCAGTCACACAGTAAAGCTAAGCACAGTGCTAAA
mRNA sequenceShow/hide mRNA sequence
GGTGTTGAAGTTAAGCCTGGTCAGCCACTCTCTGTGCAGCCTGGTGACATGAACTATGTGCATCTATCACAGGCGACTCTAGGTGATTTGAAGAAGGACAAAGCAAATGA
ACCCGTGACTATTTTTTTGAAAATCGATGACCAGAAGCTTGTTCTGGGAGTTCTCTCTGCCGACAAGTTCCCTCAGATATCATTTGATCTCGTGTTTGAGAAGGAATTTG
AGCTCTCTCACAATGGAAAGGGTGGAAATTCTGATTTTGGCTCGGAGGATGAGGAACTCGGAATGCTATCTGCTGAGAATGGAAAAGCTAGCGAGAAGGAGAAGTCTATT
GGTGGAAAAATTTTTGGTCTGAAACCCGAATCTTCAAAGAAAGCAGATGCTAAGTCTATTGCGCCGAGCAAGGAAGAAGATGATGACTCCGAAGATGATGACTCATCTGA
TGAGGGTTCAGATTCCGATGATGTGTCTGATGAGGAAATGCTTGGGGGAGACAGTGACTCTGACGATGAAGATGATGGTACTGACAGTGAGGAGGAGACACCAAAGAAGG
TTAATGAATCCTCCAAGAAGAGGTCAAACGAGTCTGCCTCCAAAACCCCTGTTTCTAAGAAGACAAAGTTAGCTTCTGCTGAGAAAACTGATTCGAAGAAGGGAGGCCAT
ACAGCCACTCCCCATCCTGCCAAGAAACCTGCGAAATCTCCTGGCAAAGCAGAGACCCCTAAATCAGGAGGCCAGTTTTCTTGCACATCCTGCGATAGGTCATTTGGTTC
TGATGGTGCTCTCCAGTCACACAGTAAAGCTAAGCACAGTGCTAAA
Protein sequenceShow/hide protein sequence
GVEVKPGQPLSVQPGDMNYVHLSQATLGDLKKDKANEPVTIFLKIDDQKLVLGVLSADKFPQISFDLVFEKEFELSHNGKGGNSDFGSEDEELGMLSAENGKASEKEKSI
GGKIFGLKPESSKKADAKSIAPSKEEDDDSEDDDSSDEGSDSDDVSDEEMLGGDSDSDDEDDGTDSEEETPKKVNESSKKRSNESASKTPVSKKTKLASAEKTDSKKGGH
TATPHPAKKPAKSPGKAETPKSGGQFSCTSCDRSFGSDGALQSHSKAKHSAK