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CSPI06G12600 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G12600
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like
Genome locationChr6:11008912..11009167
RNA-Seq ExpressionCSPI06G12600
SyntenyCSPI06G12600
Gene Ontology termsGO:0007032 - endosome organization (biological process)
GO:0007033 - vacuole organization (biological process)
GO:0010091 - trichome branching (biological process)
GO:0016197 - endosomal transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005771 - multivesicular body (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR007330 - MIT domain
IPR036181 - MIT domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646916.1 hypothetical protein Csa_020923 [Cucumis sativus]1.9e-2393.65Show/hide
Query:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSLR
        MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLH AEVIR   R
Subjt:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSLR

XP_016187569.1 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [Arachis ipaensis]6.0e-1778.69Show/hide
Query:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL
        VK+AVQEDN+GNYAKAF LYM ALE FKTH KYEKNP IKEAITLKF +YL RAE IR  L
Subjt:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL

XP_024983351.1 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [Cynara cardunculus var. scolymus]7.9e-1777.05Show/hide
Query:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL
        VK+AVQEDN+GNYAKAF LYM ALE FKTH KYEKNP I+EAIT KF +YLHRAE IR  L
Subjt:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL

XP_025641605.1 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [Arachis hypogaea]6.0e-1778.69Show/hide
Query:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL
        VK+AVQEDN+GNYAKAF LYM ALE FKTH KYEKNP IKEAITLKF +YL RAE IR  L
Subjt:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL

XP_031742596.1 LOW QUALITY PROTEIN: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [Cucumis sativus]8.7e-2495.16Show/hide
Query:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL
        MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLH AEVIR +L
Subjt:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL

TrEMBL top hitse value%identityAlignment
A0A103Y052 AAA+ ATPase domain-containing protein3.8e-1777.05Show/hide
Query:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL
        VK+AVQEDN+GNYAKAF LYM ALE FKTH KYEKNP I+EAIT KF +YLHRAE IR  L
Subjt:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL

A0A1S3C864 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X15.0e-1782.76Show/hide
Query:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVI
        MVKEAVQEDN+GNYAKAF +YM+ALE+FKT  KYEKNP IKEAITLKFNQYL RAE I
Subjt:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVI

A0A1S3C8R9 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X25.0e-1782.76Show/hide
Query:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVI
        MVKEAVQEDN+GNYAKAF +YM+ALE+FKT  KYEKNP IKEAITLKFNQYL RAE I
Subjt:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVI

A0A445AAM3 Uncharacterized protein2.9e-1778.69Show/hide
Query:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL
        VK+AVQEDN+GNYAKAF LYM ALE FKTH KYEKNP IKEAITLKF +YL RAE IR  L
Subjt:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL

A0A5A7SQE6 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X15.0e-1782.76Show/hide
Query:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVI
        MVKEAVQEDN+GNYAKAF +YM+ALE+FKT  KYEKNP IKEAITLKFNQYL RAE I
Subjt:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVI

SwissProt top hitse value%identityAlignment
P52917 Vacuolar protein sorting-associated protein 42.5e-0537.29Show/hide
Query:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIR
        +V++A+  D +  Y +A+  Y   L+      KYEKNP  K+ I  KF +YL+RAE ++
Subjt:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIR

Q4V7Q6 Serine/threonine-protein kinase ULK34.2e-0542.37Show/hide
Query:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIR
        +V EAV++D++G ++ A  LY KALE F     YE +   KEA+  K  QY+ RAE ++
Subjt:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIR

Q54PT2 Vacuolar protein sorting-associated protein 41.0e-0644.07Show/hide
Query:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIR
        +V++A ++DN+ NYA+A  LY+++LE F T  KYEK+   K  I  K  +YL RAE ++
Subjt:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIR

Q5AG40 Vacuolar protein sorting-associated protein 48.5e-0638.98Show/hide
Query:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIR
        +V++A+  D +  Y +A+ LY   L+      KYEKNP  KE +  KF +YL RAE ++
Subjt:  MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIR

Q9ZNT0 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 11.7e-1772.13Show/hide
Query:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL
        VK+AV EDN+GNY KAF LYM ALE FKTH KYEKNP I+EAIT KF +YL RAE IR  L
Subjt:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL

Arabidopsis top hitse value%identityAlignment
AT1G08270.1 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330)1.6e-0763.41Show/hide
Query:  MKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL
        M ALE FK + KYEKNP I++AIT KF +YL RAE IR  L
Subjt:  MKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL

AT1G08270.2 CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330)1.6e-0763.41Show/hide
Query:  MKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL
        M ALE FK + KYEKNP I++AIT KF +YL RAE IR  L
Subjt:  MKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL

AT2G27600.1 AAA-type ATPase family protein1.2e-1872.13Show/hide
Query:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL
        VK+AV EDN+GNY KAF LYM ALE FKTH KYEKNP I+EAIT KF +YL RAE IR  L
Subjt:  VKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGAAGCAGTACAGGAAGATAATTCTGGCAATTATGCCAAGGCCTTCCTCTTATATATGAAAGCCTTGGAGAGCTTCAAAACTCATTTCAAGTATGAGAAGAA
TCCCAACATCAAGGAAGCCATTACACTAAAATTCAACCAGTACTTGCATCGTGCCGAAGTGATTCGGTGCTCTCTTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGGAAGCAGTACAGGAAGATAATTCTGGCAATTATGCCAAGGCCTTCCTCTTATATATGAAAGCCTTGGAGAGCTTCAAAACTCATTTCAAGTATGAGAAGAA
TCCCAACATCAAGGAAGCCATTACACTAAAATTCAACCAGTACTTGCATCGTGCCGAAGTGATTCGGTGCTCTCTTCGATGATGGCGGTCTTCCTGGAACGAGTTCTAGT
GGATATGGGGTGGATCCAGAGCAAGCTAAGCTGCTG
Protein sequenceShow/hide protein sequence
MVKEAVQEDNSGNYAKAFLLYMKALESFKTHFKYEKNPNIKEAITLKFNQYLHRAEVIRCSLR