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CSPI06G13010 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G13010
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionhistidine-rich glycoprotein-like
Genome locationChr6:11522833..11523271
RNA-Seq ExpressionCSPI06G13010
SyntenyCSPI06G13010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049886.1 histidine-rich glycoprotein-like [Cucumis melo var. makuwa]2.6e-0436.77Show/hide
Query:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------
        +HH  HL +A++                HH+HLGE    REVELHHH +L +  +E          EAKLH HHH  +AE+HHH                
Subjt:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------

Query:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ
                   HLR AE  HHH   H   E ELHHHH    LE      +ILERQ
Subjt:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ

TYK07624.1 histidine-rich glycoprotein-like [Cucumis melo var. makuwa]2.6e-0436.77Show/hide
Query:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------
        +HH  HL +A++                HH+HLGE    REVELHHH +L +  +E          EAKLH HHH  +AE+HHH                
Subjt:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------

Query:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ
                   HLR AE  HHH   H   E ELHHHH    LE      +ILERQ
Subjt:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ

XP_008441951.1 PREDICTED: histidine-rich glycoprotein-like [Cucumis melo]2.6e-0436.77Show/hide
Query:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------
        +HH  HL +A++                HH+HLGE    REVELHHH +L +  +E          EAKLH HHH  +AE+HHH                
Subjt:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------

Query:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ
                   HLR AE  HHH   H   E ELHHHH    LE      +ILERQ
Subjt:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ

TrEMBL top hitse value%identityAlignment
A0A1S3B5B4 histidine-rich glycoprotein-like1.2e-0436.77Show/hide
Query:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------
        +HH  HL +A++                HH+HLGE    REVELHHH +L +  +E          EAKLH HHH  +AE+HHH                
Subjt:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------

Query:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ
                   HLR AE  HHH   H   E ELHHHH    LE      +ILERQ
Subjt:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ

A0A5A7U6T5 Histidine-rich glycoprotein-like1.2e-0436.77Show/hide
Query:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------
        +HH  HL +A++                HH+HLGE    REVELHHH +L +  +E          EAKLH HHH  +AE+HHH                
Subjt:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------

Query:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ
                   HLR AE  HHH   H   E ELHHHH    LE      +ILERQ
Subjt:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ

A0A5D3C8P6 Histidine-rich glycoprotein-like1.2e-0436.77Show/hide
Query:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------
        +HH  HL +A++                HH+HLGE    REVELHHH +L +  +E          EAKLH HHH  +AE+HHH                
Subjt:  MHHRHHLGKARL----------------HHQHLGEGIYLREVELHHH-YLEDPHIE----------EAKLH-HHHLGEAELHHH----------------

Query:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ
                   HLR AE  HHH   H   E ELHHHH    LE      +ILERQ
Subjt:  -----------HLRGAELHHHHLGEHHVGEVELHHHH----LEEASFSTIILERQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCATCGTCATCATCTTGGAAAGGCAAGGTTGCACCACCAACATCTTGGAGAGGGGATTTATCTTAGAGAGGTGGAGTTGCACCACCACTATCTTGAAGACCCCCA
TATTGAAGAGGCAAAGTTGCACCACCACCATCTTGGAGAGGCGGAGTTGCACCACCATCATCTTAGAGGGGCAGAGCTGCACCACCACCATCTTGGAGAGCACCATGTTG
GAGAAGTAGAGTTACACCACCACCATCTAGAAGAGGCGAGTTTCTCCACCATCATCTTGGAGAGGCAAGCAACACTGTGTGAAGGAATGGAATTCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCACCATCGTCATCATCTTGGAAAGGCAAGGTTGCACCACCAACATCTTGGAGAGGGGATTTATCTTAGAGAGGTGGAGTTGCACCACCACTATCTTGAAGACCCCCA
TATTGAAGAGGCAAAGTTGCACCACCACCATCTTGGAGAGGCGGAGTTGCACCACCATCATCTTAGAGGGGCAGAGCTGCACCACCACCATCTTGGAGAGCACCATGTTG
GAGAAGTAGAGTTACACCACCACCATCTAGAAGAGGCGAGTTTCTCCACCATCATCTTGGAGAGGCAAGCAACACTGTGTGAAGGAATGGAATTCTCATAG
Protein sequenceShow/hide protein sequence
MHHRHHLGKARLHHQHLGEGIYLREVELHHHYLEDPHIEEAKLHHHHLGEAELHHHHLRGAELHHHHLGEHHVGEVELHHHHLEEASFSTIILERQATLCEGMEFS