| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0054521.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa] | 6.7e-88 | 89.84 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENAQF-------GRKICIEEGNGERFGKLELELGASAWVIDCLVAAAELSNPLGFWWRRWLE
YEAKM+DIEKNESKAADRIKQSYLKENA+ GRKICIEE NGER KLELELG SAWV DCLVAAAELSNPL FW RRWLE
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENAQF-------GRKICIEEGNGERFGKLELELGASAWVIDCLVAAAELSNPLGFWWRRWLE
|
|
| KAG6604740.1 hypothetical protein SDJN03_02057, partial [Cucurbita argyrosperma subsp. sororia] | 4.8e-70 | 87.9 | Show/hide |
Query: SSAIVLLLQRFSSS-SSQTVAWQPEKEEMYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFY
SS IVLL QRFSSS SSQTVAWQPEKEEMY VRK+PSLVDLCV KAIDNLRFLGDVGETD+HLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFY
Subjt: SSAIVLLLQRFSSS-SSQTVAWQPEKEEMYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFY
Query: ERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMEDIEKNESKAADRIKQSYLKENAQ
ERQFG+E+T V ERM++K+VAFRWIQLYEAKM+DIEKNES+AADRIKQSYLKENA+
Subjt: ERQFGKESTTTVIERMRQKRVAFRWIQLYEAKMEDIEKNESKAADRIKQSYLKENAQ
|
|
| XP_004143189.1 transcription elongation factor B polypeptide 3 isoform X1 [Cucumis sativus] | 2.1e-65 | 99.22 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENAQ
YEAKMEDIEKNESKAADRIKQSYLKENA+
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENAQ
|
|
| XP_016901950.1 PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo] | 2.3e-64 | 96.9 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENAQ
YEAKM+DIEKNESKAADRIKQSYLKENA+
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENAQ
|
|
| XP_031743455.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis sativus] | 2.1e-65 | 99.22 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENAQ
YEAKMEDIEKNESKAADRIKQSYLKENA+
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENAQ
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KGZ5 Uncharacterized protein | 1.2e-103 | 96.91 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENAQFGRKICIEEGNGERFGKLELELGASAWVIDCLVAAAELSNPLGFWWRRWLERTNIFFQVLANSRR
YEAKMEDIEKNESKAADRIKQSYLKENAQ GRKICIEEGNGERFGKLELELGASAWVIDCLVAAAELSNPLGFWWRRWLERTNIFFQ RR
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENAQFGRKICIEEGNGERFGKLELELGASAWVIDCLVAAAELSNPLGFWWRRWLERTNIFFQVLANSRR
|
|
| A0A1S3C4D6 transcription elongation factor B polypeptide 3 isoform X1 | 1.1e-64 | 96.9 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENAQ
YEAKM+DIEKNESKAADRIKQSYLKENA+
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENAQ
|
|
| A0A1S4E1U0 transcription elongation factor B polypeptide 3 isoform X2 | 1.1e-64 | 96.9 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENAQ
YEAKM+DIEKNESKAADRIKQSYLKENA+
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENAQ
|
|
| A0A5A7ULV4 Transcription elongation factor B polypeptide 3 isoform X2 | 3.2e-88 | 89.84 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENAQF-------GRKICIEEGNGERFGKLELELGASAWVIDCLVAAAELSNPLGFWWRRWLE
YEAKM+DIEKNESKAADRIKQSYLKENA+ GRKICIEE NGER KLELELG SAWV DCLVAAAELSNPL FW RRWLE
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENAQF-------GRKICIEEGNGERFGKLELELGASAWVIDCLVAAAELSNPLGFWWRRWLE
|
|
| A0A5D3BGR1 Transcription elongation factor B polypeptide 3 isoform X2 | 1.1e-64 | 96.9 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMEDIEKNESKAADRIKQSYLKENAQ
YEAKM+DIEKNESKAADRIKQSYLKENA+
Subjt: YEAKMEDIEKNESKAADRIKQSYLKENAQ
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G42780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | 1.3e-28 | 45.16 | Show/hide |
Query: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LL++IL HCT++QL H+E +++ DL+P+TDK WK FY++ +G+E +IE + +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
Query: KMEDIEKNESKAADRIKQSYLKEN
K+ +++ E + R+K+ Y EN
Subjt: KMEDIEKNESKAADRIKQSYLKEN
|
|
| AT2G42780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). | 1.3e-28 | 45.16 | Show/hide |
Query: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LL++IL HCT++QL H+E +++ DL+P+TDK WK FY++ +G+E +IE + +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
Query: KMEDIEKNESKAADRIKQSYLKEN
K+ +++ E + R+K+ Y EN
Subjt: KMEDIEKNESKAADRIKQSYLKEN
|
|
