| GenBank top hits | e value | %identity | Alignment |
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| KAA0054522.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa] | 1.0e-49 | 54.43 | Show/hide |
Query: VETLFDLGFLDLRVERD-VRIWSRNPSEGFSCK--SFFTVNIG-------SLSRWGVCALFDVIWRIKIPKKAGKEKNFAYGVSLLYPLSEGRGRPGSSL
+ FD F+D + ++ + W +E F C+ SF +V +G L R+G+ +L + K + K + +L + + L
Subjt: VETLFDLGFLDLRVERD-VRIWSRNPSEGFSCK--SFFTVNIG-------SLSRWGVCALFDVIWRIKIPKKAGKEKNFAYGVSLLYPLSEGRGRPGSSL
Query: LGLLEFDFSFAGQRDVCAMIKEFLLHPHFEDKDHF---LWGKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRR
+ EFDFSFAGQRDVC L + GKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRR
Subjt: LGLLEFDFSFAGQRDVCAMIKEFLLHPHFEDKDHF---LWGKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRR
Query: NAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
NAVQKSSDI STKKPMF GRESASTSKNTSTHMAKRW
Subjt: NAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
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| TYJ98274.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa] | 5.9e-42 | 97.92 | Show/hide |
Query: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI STKKPMF GRESASTSKNTSTHMAKRW
Subjt: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
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| XP_004143189.1 transcription elongation factor B polypeptide 3 isoform X1 [Cucumis sativus] | 4.1e-43 | 100 | Show/hide |
Query: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
Subjt: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
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| XP_008456387.2 PREDICTED: transcription elongation factor B polypeptide 3 isoform X1 [Cucumis melo] | 1.1e-40 | 97.89 | Show/hide |
Query: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKR
KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI STKKPMF GRESASTSKNTSTHMAKR
Subjt: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKR
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| XP_016901950.1 PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo] | 1.1e-40 | 97.89 | Show/hide |
Query: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKR
KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI STKKPMF GRESASTSKNTSTHMAKR
Subjt: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KF63 Uncharacterized protein | 3.1e-44 | 100 | Show/hide |
Query: GKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
GKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
Subjt: GKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
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| A0A1S3C4D6 transcription elongation factor B polypeptide 3 isoform X1 | 5.4e-41 | 97.89 | Show/hide |
Query: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKR
KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI STKKPMF GRESASTSKNTSTHMAKR
Subjt: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKR
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| A0A1S4E1U0 transcription elongation factor B polypeptide 3 isoform X2 | 5.4e-41 | 97.89 | Show/hide |
Query: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKR
KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI STKKPMF GRESASTSKNTSTHMAKR
Subjt: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKR
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| A0A5A7UFH4 Transcription elongation factor B polypeptide 3 isoform X2 | 4.9e-50 | 54.43 | Show/hide |
Query: VETLFDLGFLDLRVERD-VRIWSRNPSEGFSCK--SFFTVNIG-------SLSRWGVCALFDVIWRIKIPKKAGKEKNFAYGVSLLYPLSEGRGRPGSSL
+ FD F+D + ++ + W +E F C+ SF +V +G L R+G+ +L + K + K + +L + + L
Subjt: VETLFDLGFLDLRVERD-VRIWSRNPSEGFSCK--SFFTVNIG-------SLSRWGVCALFDVIWRIKIPKKAGKEKNFAYGVSLLYPLSEGRGRPGSSL
Query: LGLLEFDFSFAGQRDVCAMIKEFLLHPHFEDKDHF---LWGKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRR
+ EFDFSFAGQRDVC L + GKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRR
Subjt: LGLLEFDFSFAGQRDVCAMIKEFLLHPHFEDKDHF---LWGKQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRR
Query: NAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
NAVQKSSDI STKKPMF GRESASTSKNTSTHMAKRW
Subjt: NAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
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| A0A5D3BGR1 Transcription elongation factor B polypeptide 3 isoform X2 | 2.9e-42 | 97.92 | Show/hide |
Query: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDI STKKPMF GRESASTSKNTSTHMAKRW
Subjt: KQSRQIQICSKVPPSSNKRSFGGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKNTSTHMAKRW
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G42780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | 1.5e-14 | 53.41 | Show/hide |
Query: KQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKN
KQSRQ ++CSK PPS KR F G S GYN+ + K+ I+KKAKI++L+SQE+KN+ A +RN +QKS IS+ KK S S STS++
Subjt: KQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKN
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| AT2G42780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). | 7.3e-14 | 51.14 | Show/hide |
Query: KQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKN
KQSRQ ++CSK PPS KR F G S GYN+ + K+ I+KKAKI++L+SQE+KN+ A +RN +QKS IS+ K+ S + STS++
Subjt: KQSRQIQICSKVPPSSNKRSF-GGSGYGYNVANTKNKILKKAKIEVLQSQEMKNIKAWRRNAVQKSSDISSTKKPMFSGRESASTSKN
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