; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G13260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G13260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationChr6:11751172..11752328
RNA-Seq ExpressionCSPI06G13260
SyntenyCSPI06G13260
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008236 - serine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN62248.1 hypothetical protein VITISV_022540 [Vitis vinifera]5.6e-7960Show/hide
Query:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK
        E    LPK+W++ ++HP+D I+ N    V+TRSSL N  NN  F+SQIEP++  D   DE W++AMQEELNQFER++VW+LV RPSN S+IGT+WVF NK
Subjt:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK

Query:  MDENGNIIRNKARLVAQEFSK-------------------------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKT
        MDEN  I+RNKARLVAQ F++                         CMH+EFEMSMMGEL+FFLGLQIKQLK+G FI+Q KY RDLLK+F + E K  KT
Subjt:  MDENGNIIRNKARLVAQEFSK-------------------------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKT

Query:  PMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKE
        PMS++ KLD+DEK   +    YRG+IGSLLYLTASRPDIM+SVCLCARFQSCPKE
Subjt:  PMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKE

GAU34690.1 hypothetical protein TSUD_29310 [Trifolium subterraneum]2.2e-7562.87Show/hide
Query:  LPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENG
        LPK WR    HP D I+ N++ GV+TR +L +   N+  +SQIEPRS  +A  DE WI AM+EEL+QFE+N+VW LVP P + SIIGT+W+FRNK+DENG
Subjt:  LPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENG

Query:  NIIRNKARLVAQEFSK-----------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDI
         ++RNKARLVAQ +++            + +EFEMSMMGEL FFLGLQIKQL+DGIFISQEKY  DLLKK+K+NE K+  TPM  +T LDKDEKGK V  
Subjt:  NIIRNKARLVAQEFSK-----------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDI

Query:  KTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES
        K YRGMIGSLLYLTASRPDI+F+V LCARFQ+ PKES
Subjt:  KTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES

GAU41423.1 hypothetical protein TSUD_26030 [Trifolium subterraneum]9.9e-7663.14Show/hide
Query:  PKEWRYALSHPKDLILDNSEQGVKTRSSLNFFNNVV-FVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGN
        PK WR    HP D I+ N+E GV+TR +L     ++  +SQIEPRS  +A  DEFWI AM+EEL+QFE+N+VW LVP P + SIIGT+WVFRNK+DENG 
Subjt:  PKEWRYALSHPKDLILDNSEQGVKTRSSLNFFNNVV-FVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGN

Query:  IIRNKARLVAQEFSK-----------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIK
        ++RNKARLVAQ +++            + +EFEMSMMGEL FFLGLQIKQ +DGIFISQEKY  DLLKK+K+NE K+  TPM  +T LDKDEKGK V  K
Subjt:  IIRNKARLVAQEFSK-----------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIK

Query:  TYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES
         YRGMIGSLLYLTASRPDI+F+V LCARFQ+ PKES
Subjt:  TYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES

RVW50731.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.0e-8051.23Show/hide
Query:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK
        E    LPK+W++ ++HP+D I+ N   GV+TRSSL N  NN+ F+SQIEP++ KDA  DE W++AMQEELNQFER++VW+LVPRPSN S+IGTKWVFRNK
Subjt:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK

Query:  MDENGNIIRNKARLVAQ-----------------------------------------------------------------------------------
        MDENG I+RNKARLVAQ                                                                                   
Subjt:  MDENGNIIRNKARLVAQ-----------------------------------------------------------------------------------

Query:  ----------EFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYL
                   FSKCMH+EFEMSMMGEL++FLGLQIKQLK+G FI+Q KY +DLLK+F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYL
Subjt:  ----------EFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYL

Query:  TASRPDIMFSVCLCARFQSCPKES
        TASRPDIM+SVCLCARFQSCPKES
Subjt:  TASRPDIMFSVCLCARFQSCPKES

RVW71911.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.2e-7544.62Show/hide
Query:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK
        E    LPK+W++ ++HP+D I+ N   GV+TRSSL N  NN+ F+SQIEP++ KDA  DE W++AMQEELNQFER++VW+LVPRPSN S+IGTKWVFRNK
Subjt:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK

Query:  MDENGNIIRNKARLVAQ-----------------------------------------------------------------------------------
        MDENG I+RNKARLVAQ                                                                                   
Subjt:  MDENGNIIRNKARLVAQ-----------------------------------------------------------------------------------

Query:  ----------------------------------------------------------EFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
                                                                  +FSKCMH+EFEMSMMGEL++FLGLQIKQLK+G FI+Q KY +
Subjt:  ----------------------------------------------------------EFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES
        DLLK+F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYLTASRPDIM+SVCLCARFQSCPKES
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES

TrEMBL top hitse value%identityAlignment
A0A2Z6NE66 Uncharacterized protein1.1e-7562.87Show/hide
Query:  LPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENG
        LPK WR    HP D I+ N++ GV+TR +L +   N+  +SQIEPRS  +A  DE WI AM+EEL+QFE+N+VW LVP P + SIIGT+W+FRNK+DENG
Subjt:  LPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENG

Query:  NIIRNKARLVAQEFSK-----------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDI
         ++RNKARLVAQ +++            + +EFEMSMMGEL FFLGLQIKQL+DGIFISQEKY  DLLKK+K+NE K+  TPM  +T LDKDEKGK V  
Subjt:  NIIRNKARLVAQEFSK-----------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDI

Query:  KTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES
        K YRGMIGSLLYLTASRPDI+F+V LCARFQ+ PKES
Subjt:  KTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES

A0A2Z6NHP6 CCHC-type domain-containing protein4.8e-7663.14Show/hide
Query:  PKEWRYALSHPKDLILDNSEQGVKTRSSLNFFNNVV-FVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGN
        PK WR    HP D I+ N+E GV+TR +L     ++  +SQIEPRS  +A  DEFWI AM+EEL+QFE+N+VW LVP P + SIIGT+WVFRNK+DENG 
Subjt:  PKEWRYALSHPKDLILDNSEQGVKTRSSLNFFNNVV-FVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGN

Query:  IIRNKARLVAQEFSK-----------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIK
        ++RNKARLVAQ +++            + +EFEMSMMGEL FFLGLQIKQ +DGIFISQEKY  DLLKK+K+NE K+  TPM  +T LDKDEKGK V  K
Subjt:  IIRNKARLVAQEFSK-----------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIK

Query:  TYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES
         YRGMIGSLLYLTASRPDI+F+V LCARFQ+ PKES
Subjt:  TYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES

A0A438ESK8 Retrovirus-related Pol polyprotein from transposon RE14.9e-8151.23Show/hide
Query:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK
        E    LPK+W++ ++HP+D I+ N   GV+TRSSL N  NN+ F+SQIEP++ KDA  DE W++AMQEELNQFER++VW+LVPRPSN S+IGTKWVFRNK
Subjt:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK

Query:  MDENGNIIRNKARLVAQ-----------------------------------------------------------------------------------
        MDENG I+RNKARLVAQ                                                                                   
Subjt:  MDENGNIIRNKARLVAQ-----------------------------------------------------------------------------------

Query:  ----------EFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYL
                   FSKCMH+EFEMSMMGEL++FLGLQIKQLK+G FI+Q KY +DLLK+F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYL
Subjt:  ----------EFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYL

Query:  TASRPDIMFSVCLCARFQSCPKES
        TASRPDIM+SVCLCARFQSCPKES
Subjt:  TASRPDIMFSVCLCARFQSCPKES

A0A438H7V2 Retrovirus-related Pol polyprotein from transposon RE11.1e-7544.62Show/hide
Query:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK
        E    LPK+W++ ++HP+D I+ N   GV+TRSSL N  NN+ F+SQIEP++ KDA  DE W++AMQEELNQFER++VW+LVPRPSN S+IGTKWVFRNK
Subjt:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK

Query:  MDENGNIIRNKARLVAQ-----------------------------------------------------------------------------------
        MDENG I+RNKARLVAQ                                                                                   
Subjt:  MDENGNIIRNKARLVAQ-----------------------------------------------------------------------------------

Query:  ----------------------------------------------------------EFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
                                                                  +FSKCMH+EFEMSMMGEL++FLGLQIKQLK+G FI+Q KY +
Subjt:  ----------------------------------------------------------EFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES
        DLLK+F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYLTASRPDIM+SVCLCARFQSCPKES
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKES

A5CA83 Uncharacterized protein2.7e-7960Show/hide
Query:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK
        E    LPK+W++ ++HP+D I+ N    V+TRSSL N  NN  F+SQIEP++  D   DE W++AMQEELNQFER++VW+LV RPSN S+IGT+WVF NK
Subjt:  EGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSL-NFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK

Query:  MDENGNIIRNKARLVAQEFSK-------------------------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKT
        MDEN  I+RNKARLVAQ F++                         CMH+EFEMSMMGEL+FFLGLQIKQLK+G FI+Q KY RDLLK+F + E K  KT
Subjt:  MDENGNIIRNKARLVAQEFSK-------------------------CMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKT

Query:  PMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKE
        PMS++ KLD+DEK   +    YRG+IGSLLYLTASRPDIM+SVCLCARFQSCPKE
Subjt:  PMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKE

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.4e-0829.56Show/hide
Query:  VNIIEKKEEGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSLNFFNNVVFVSQIEPRSFKDAECDE---FWILAMQEELNQFERNKVWKLVPRPSNASI
        + II ++ E   + P+     +S+ ++   DNS   V   ++   FN+V       P SF + +  +    W  A+  ELN  + N  W +  RP N +I
Subjt:  VNIIEKKEEGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSLNFFNNVVFVSQIEPRSFKDAECDE---FWILAMQEELNQFERNKVWKLVPRPSNASI

Query:  IGTKWVFRNKMDENGNIIRNKARLVAQEFSKCMHNEFE-----MSMMGELSFFLGLQIK
        + ++WVF  K +E GN IR KARLVA+ F++    ++E     ++ +    F L L I+
Subjt:  IGTKWVFRNKMDENGNIIRNKARLVAQEFSKCMHNEFE-----MSMMGELSFFLGLQIK

P92519 Uncharacterized mitochondrial protein AtMg008108.3e-0936.19Show/hide
Query:  MHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTYRGMIGSLLYLTASRPDIMFSV-
        + + F M  +G + +FLG+QIK    G+F+SQ KY   +L     N G +   PMST   L  +      K  D   +R ++G+L YLT +RPDI ++V 
Subjt:  MHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTYRGMIGSLLYLTASRPDIMFSV-

Query:  CLCAR
         +C R
Subjt:  CLCAR

P92520 Uncharacterized mitochondrial protein AtMg008202.7e-1252.11Show/hide
Query:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQEF
        EP+S   A  D  W  AMQEEL+   RNK W LVP P N +I+G KWVF+ K+  +G + R KARLVA+ F
Subjt:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQEF

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.0e-1135.19Show/hide
Query:  MHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCA
        +   F +    EL +FLG++ K++  G+ +SQ +Y  DLL +  +   K   TPM+ + KL      K  D   YRG++GSL YL  +RPDI ++V   +
Subjt:  MHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCA

Query:  RFQSCPKE
        +F   P E
Subjt:  RFQSCPKE

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.1e-1233.33Show/hide
Query:  MHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCA
        +   F +    +L +FLG++ K++  G+ +SQ +YT DLL +  +   K   TPM+T+ KL      K  D   YRG++GSL YL  +RPD+ ++V   +
Subjt:  MHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCA

Query:  RFQSCPKE
        ++   P +
Subjt:  RFQSCPKE

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.2e-1234.15Show/hide
Query:  IIRNKARLVAQEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLY
        II +       E    + + F++  +G L +FLGL+I +   GI I Q KY  DLL +  L   K +  PM  +        G  VD K YR +IG L+Y
Subjt:  IIRNKARLVAQEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLY

Query:  LTASRPDIMFSVCLCARFQSCPK
        L  +R DI F+V   ++F   P+
Subjt:  LTASRPDIMFSVCLCARFQSCPK

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 85.5e-0835.62Show/hide
Query:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQEFSK
        EP ++ +A+    W  AM +E+   E    W++   P N   IG KWV++ K + +G I R KARLVA+ +++
Subjt:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQEFSK

ATMG00810.1 DNA/RNA polymerases superfamily protein5.9e-1036.19Show/hide
Query:  MHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTYRGMIGSLLYLTASRPDIMFSV-
        + + F M  +G + +FLG+QIK    G+F+SQ KY   +L     N G +   PMST   L  +      K  D   +R ++G+L YLT +RPDI ++V 
Subjt:  MHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTYRGMIGSLLYLTASRPDIMFSV-

Query:  CLCAR
         +C R
Subjt:  CLCAR

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.0e-1352.11Show/hide
Query:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQEF
        EP+S   A  D  W  AMQEEL+   RNK W LVP P N +I+G KWVF+ K+  +G + R KARLVA+ F
Subjt:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGATGTGAACATCATAGAAAAGAAAGAAGAGGGTTTTTCATCCTTGCCTAAAGAGTGGAGATATGCTCTATCTCATCCCAAGGATTTAATTCTTGACAATTCTGA
ACAAGGTGTCAAAACTCGTTCTTCTCTTAATTTTTTCAATAATGTTGTTTTTGTGTCTCAAATTGAACCTAGAAGTTTTAAAGATGCCGAATGTGATGAGTTTTGGATTT
TAGCTATGCAAGAAGAATTAAATCAATTTGAAAGAAACAAAGTTTGGAAATTAGTCCCTAGGCCTTCTAATGCATCTATAATCGGAACAAAATGGGTTTTTAGAAATAAG
ATGGATGAAAATGGAAATATCATTAGAAATAAAGCTAGACTTGTAGCTCAAGAATTTTCCAAGTGTATGCATAATGAGTTTGAGATGAGTATGATGGGAGAACTTAGTTT
CTTCCTTGGTCTTCAAATCAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTGCTCAAGAAATTCAAATTAAATGAAGGTAAAGTTGCAA
AAACTCCTATGAGCACTACCACTAAGCTTGACAAAGATGAAAAAGGTAAGTGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCTTTACTTTATTTGACCGCTAGT
AGACCCGATATCATGTTTAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCAATTTCCCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGATGTGAACATCATAGAAAAGAAAGAAGAGGGTTTTTCATCCTTGCCTAAAGAGTGGAGATATGCTCTATCTCATCCCAAGGATTTAATTCTTGACAATTCTGA
ACAAGGTGTCAAAACTCGTTCTTCTCTTAATTTTTTCAATAATGTTGTTTTTGTGTCTCAAATTGAACCTAGAAGTTTTAAAGATGCCGAATGTGATGAGTTTTGGATTT
TAGCTATGCAAGAAGAATTAAATCAATTTGAAAGAAACAAAGTTTGGAAATTAGTCCCTAGGCCTTCTAATGCATCTATAATCGGAACAAAATGGGTTTTTAGAAATAAG
ATGGATGAAAATGGAAATATCATTAGAAATAAAGCTAGACTTGTAGCTCAAGAATTTTCCAAGTGTATGCATAATGAGTTTGAGATGAGTATGATGGGAGAACTTAGTTT
CTTCCTTGGTCTTCAAATCAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTGCTCAAGAAATTCAAATTAAATGAAGGTAAAGTTGCAA
AAACTCCTATGAGCACTACCACTAAGCTTGACAAAGATGAAAAAGGTAAGTGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCTTTACTTTATTTGACCGCTAGT
AGACCCGATATCATGTTTAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCAATTTCCCTATAA
Protein sequenceShow/hide protein sequence
MQDVNIIEKKEEGFSSLPKEWRYALSHPKDLILDNSEQGVKTRSSLNFFNNVVFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK
MDENGNIIRNKARLVAQEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTAS
RPDIMFSVCLCARFQSCPKESISL