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CSPI06G13390 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G13390
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionZf-CCHC domain-containing protein/DUF4219 domain-containing protein/UBN2 domain-containing protein
Genome locationChr6:11900709..11900951
RNA-Seq ExpressionCSPI06G13390
SyntenyCSPI06G13390
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026314.1 hypothetical protein E6C27_scaffold19G003290 [Cucumis melo var. makuwa]5.9e-0969.39Show/hide
Query:  IPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVN
        IP YGVVALV RK L+ RWWSVT+ SK VN+ RRC ISQVT +ILA+ N
Subjt:  IPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVN

KAA0043449.1 hypothetical protein E6C27_scaffold1639G00660 [Cucumis melo var. makuwa]1.0e-0868.75Show/hide
Query:  VERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNF
        VERKM M RWWS T RSKNVN+ R CWISQVTR+IL + N  SA G+F
Subjt:  VERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNF

KGN47035.1 hypothetical protein Csa_021001 [Cucumis sativus]8.7e-37100Show/hide
Query:  MTYCETIPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNFLKSQYELAIVIVVLVGN
        MTYCETIPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNFLKSQYELAIVIVVLVGN
Subjt:  MTYCETIPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNFLKSQYELAIVIVVLVGN

TYK04364.1 hypothetical protein E5676_scaffold675G00350 [Cucumis melo var. makuwa]2.4e-1076Show/hide
Query:  IPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNP
        I  Y VVAL  RKMLM RWWSVT RSKNVNMAR C ISQVT VILA+ NP
Subjt:  IPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNP

TYK16359.1 hypothetical protein E5676_scaffold21G001430 [Cucumis melo var. makuwa]1.7e-0864Show/hide
Query:  VALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGN
        + LV   MLM  WWSVT RSKN+NMARRCWISQVTR +L + NP S  G+
Subjt:  VALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGN

TrEMBL top hitse value%identityAlignment
A0A0A0KBJ6 Uncharacterized protein4.2e-37100Show/hide
Query:  MTYCETIPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNFLKSQYELAIVIVVLVGN
        MTYCETIPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNFLKSQYELAIVIVVLVGN
Subjt:  MTYCETIPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNFLKSQYELAIVIVVLVGN

A0A5A7SKT6 Uncharacterized protein2.8e-0969.39Show/hide
Query:  IPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVN
        IP YGVVALV RK L+ RWWSVT+ SK VN+ RRC ISQVT +ILA+ N
Subjt:  IPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVN

A0A5A7TQG8 Uncharacterized protein4.8e-0968.75Show/hide
Query:  VERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNF
        VERKM M RWWS T RSKNVN+ R CWISQVTR+IL + N  SA G+F
Subjt:  VERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNF

A0A5D3BZE8 Uncharacterized protein1.2e-1076Show/hide
Query:  IPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNP
        I  Y VVAL  RKMLM RWWSVT RSKNVNMAR C ISQVT VILA+ NP
Subjt:  IPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNP

A0A5D3D1M5 Uncharacterized protein8.3e-0964Show/hide
Query:  VALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGN
        + LV   MLM  WWSVT RSKN+NMARRCWISQVTR +L + NP S  G+
Subjt:  VALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTACTGTGAAACTATTCCAACGTATGGTGTTGTAGCGCTTGTTGAGAGAAAGATGTTGATGACACGCTGGTGGAGTGTAACTATCAGGTCTAAGAATGTGAATAT
GGCGAGACGTTGTTGGATATCTCAAGTAACTCGCGTGATCTTGGCAAAAGTGAATCCCGGGTCAGCAATGGGAAATTTTCTCAAGTCTCAATATGAGCTTGCGATTGTGA
TTGTTGTACTAGTTGGTAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTACTGTGAAACTATTCCAACGTATGGTGTTGTAGCGCTTGTTGAGAGAAAGATGTTGATGACACGCTGGTGGAGTGTAACTATCAGGTCTAAGAATGTGAATAT
GGCGAGACGTTGTTGGATATCTCAAGTAACTCGCGTGATCTTGGCAAAAGTGAATCCCGGGTCAGCAATGGGAAATTTTCTCAAGTCTCAATATGAGCTTGCGATTGTGA
TTGTTGTACTAGTTGGTAACTAG
Protein sequenceShow/hide protein sequence
MTYCETIPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNFLKSQYELAIVIVVLVGN