CuGenDBv2

Gene ID	CSPI06G13960
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Thylakoid soluble phosphoprotein TSP
Genome location	Chr6:12351332..12352190
RNA-Seq Expression	CSPI06G13960
Synteny	CSPI06G13960
Gene Ontology terms	NA
InterPro domains	IPR021584 - Thylakoid soluble phosphoprotein TSP9 IPR037244 - Thylakoid soluble phosphoprotein TSP9 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7010512.1 hypothetical protein SDJN02_27306, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.8e-35

87.63

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSL +DQLLETDPVLQKVEGKD+ S    G+V GGRKNSVQVPPKKN GGFGGLFAK+D
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

XP_004143212.1 uncharacterized protein LOC101205268 [Cucumis sativus]

2.3e-44

100

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

XP_008464052.1 PREDICTED: uncharacterized protein LOC103502033 [Cucumis melo]

6.0e-40

93.81

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKD  SGNGTG+VR GRKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

XP_023532336.1 uncharacterized protein LOC111794525 [Cucurbita pepo subsp. pepo]

7.0e-33

82.47

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASL  AFSPAAGRVFAATAAKGAGESKKEKG+LDWI+G + KDQLLETDPVLQKVEGK+  + NG G+VRGG+KNSVQVPPKKN G FGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

XP_038901860.1 uncharacterized protein LOC120088545 [Benincasa hispida]

1.3e-39

93.81

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAA RVFAATAAKGAGESKKE+GLLDWIIGSLNKDQLLETDPVLQKVEGK AA+GNG+G+VRGGRKNSVQVPPKKNGGGFGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KC59 Uncharacterized protein

1.1e-44

100

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

A0A1S3CKK5 uncharacterized protein LOC103502033

2.9e-40

93.81

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKD  SGNGTG+VR GRKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

A0A5A7V5S9 Uncharacterized protein

2.9e-40

93.81

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKD  SGNGTG+VR GRKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

A0A6J1G777 uncharacterized protein LOC111451452

9.9e-33

81.44

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASL  AFSPAAGRVFAATAAKGAGE KKEKG+LDWI+G + KDQLLETDPVLQKVEGK+  + NG G+VRGG+KNSVQVPPKKN G FGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

A0A6J1L2X7 uncharacterized protein LOC111499927

9.9e-33

81.44

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD
        MASL  AFSPAAGRVFAATAAKGAGE KKEKG+LDWI+G + KDQLLETDPVLQKVEGK+  + NG G+VRGG+KNSVQVPPKKN G FGGLFAKKD
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G47070.1 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

2.1e-14

43.01

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Query:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNK-DQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGL
        ++SL ++F+PA  RV+A +   G+G  K+EK  +D+++G + K DQ  ET+P+L+KV+ K+  +  G G+VRGG+ ++    PKK+ GGFGGL
Subjt:  MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNK-DQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGL

Sequences

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CDS sequence

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ATGGCCTCTCTTCCAATCGCATTCTCTCCGGCCGCCGGACGCGTATTCGCAGCCACCGCGGCCAAAGGCGCCGGCGAAAGCAAGAAAGAAAAGGGCCTTCTTGATTGGAT
CATCGGCAGCTTGAATAAGGATCAGCTTCTTGAAACCGACCCTGTTCTTCAAAAAGTCGAAGGCAAGGACGCCGCCTCCGGTAACGGCACCGGCTCCGTCCGCGGTGGCC
GAAAGAATTCCGTCCAAGTCCCCCCGAAGAAGAACGGCGGCGGGTTTGGTGGTCTCTTTGCCAAGAAAGACTGA

mRNA sequence

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CACAATGAATCCAGGAGTTGGGCCGTGCCGTGGATCCTAATGGGGCAGCCCAATAACCATATCGGCCCATGGGCCCATTCTAGAAAGCTAAAGGAAAATCGACGTGTCGA
ATTAGCAGCCAAGTCTAGTGGAGATTAATCGTAAAACATACAAAATAATAATAATAACAAGAGAAAGAGAGAAAAGAAAAGAAAAGAAAAAGAAGAAAAAAAATGAGGAC
TTTGAATCAAAGGGATAAGGCGCCTGTGGTGAGCTCGCGCTTCACATCACTCCATCGCCTCTTATTTTACCCAAATATCCTCTTCCCAATTTCATTCCATTTTGTTTCCA
ATTAAAACAACATTATGGCCTCTCTTCCAATCGCATTCTCTCCGGCCGCCGGACGCGTATTCGCAGCCACCGCGGCCAAAGGCGCCGGCGAAAGCAAGAAAGAAAAGGGC
CTTCTTGATTGGATCATCGGCAGCTTGAATAAGGATCAGCTTCTTGAAACCGACCCTGTTCTTCAAAAAGTCGAAGGCAAGGACGCCGCCTCCGGTAACGGCACCGGCTC
CGTCCGCGGTGGCCGAAAGAATTCCGTCCAAGTCCCCCCGAAGAAGAACGGCGGCGGGTTTGGTGGTCTCTTTGCCAAGAAAGACTGACACTTGCGGGGGCGGTGCCATT
TCACTCATATATAATTTCTTTGTATTGTTGCCTTTTTTTTTTCTTCTTCTTATGTTGCTCTGATTGATTATTTTTCAATACTATGGTTACATTATTAATTATTGTTGGTA
ATTACTTTATTTTATTTACCATTATTATTATTATTGTTATTGTTATTATTTGTTCAATTAATTGATACGACAAAGATCTAGCTGCTAAT

Protein sequence

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MASLPIAFSPAAGRVFAATAAKGAGESKKEKGLLDWIIGSLNKDQLLETDPVLQKVEGKDAASGNGTGSVRGGRKNSVQVPPKKNGGGFGGLFAKKD

CSPI06G13960 (gene) of Cucumber (PI 183967) v1 genome