; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G13970 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G13970
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionJosephin-like protein
Genome locationChr6:12353158..12353995
RNA-Seq ExpressionCSPI06G13970
SyntenyCSPI06G13970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061847.1 josephin-like protein [Cucumis melo var. makuwa]1.4e-4592.79Show/hide
Query:  TTTLEQKVKKPNSSS-NNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV
        TTTLEQKVKKPNSSS NNRTGRSTFQKCRF SPKSLK LQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQ VP AVP+ASSKA+QVPAT+DSHRTEAV
Subjt:  TTTLEQKVKKPNSSS-NNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV

Query:  EDCIKYINAST
        EDCIKYINAST
Subjt:  EDCIKYINAST

KAG6570666.1 hypothetical protein SDJN03_29581, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2162.16Show/hide
Query:  TTTLEQKVKKPNSSSN-NRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV
        T T+EQ+++K N SSN  R    +F+K RF   KSLK LQFSPL FLKHLA+KVTRA H MAMKR RP  +Q    A+PVA+SK + V A +DSHRTEAV
Subjt:  TTTLEQKVKKPNSSSN-NRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV

Query:  EDCIKYINAST
        EDCIKYIN+S+
Subjt:  EDCIKYINAST

KAG7035372.1 hypothetical protein SDJN02_02168, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-2059.46Show/hide
Query:  MTTTLEQKVKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV
        M TT+EQ      SS+     R +FQKCRF   +SLK LQFSPL FLKHLADKVTRA H M MKR    ++   PA V +A+SK + V A IDSHRTEAV
Subjt:  MTTTLEQKVKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV

Query:  EDCIKYINAST
        EDCIKYIN+S+
Subjt:  EDCIKYINAST

KGN47099.1 hypothetical protein Csa_020767 [Cucumis sativus]5.4e-53100Show/hide
Query:  MTTTLEQKVKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV
        MTTTLEQKVKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV
Subjt:  MTTTLEQKVKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV

Query:  EDCIKYINAST
        EDCIKYINAST
Subjt:  EDCIKYINAST

XP_038902310.1 uncharacterized protein LOC120088944 [Benincasa hispida]3.9e-2773.21Show/hide
Query:  MTTTLEQKVKKPNSSSN-NRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEA
        MTTTLE  + K NSSSN    GR  FQKCRF SPKSLK LQFSPL FLK LAD+V RALH MAMKR RP  KQ  P AVPV SSK +Q  A IDSHRTEA
Subjt:  MTTTLEQKVKKPNSSSN-NRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEA

Query:  VEDCIKYINAST
        VEDCIKYINAST
Subjt:  VEDCIKYINAST

TrEMBL top hitse value%identityAlignment
A0A0A0KE45 Uncharacterized protein2.6e-53100Show/hide
Query:  MTTTLEQKVKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV
        MTTTLEQKVKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV
Subjt:  MTTTLEQKVKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV

Query:  EDCIKYINAST
        EDCIKYINAST
Subjt:  EDCIKYINAST

A0A5A7V4L5 Josephin-like protein6.9e-4692.79Show/hide
Query:  TTTLEQKVKKPNSSS-NNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV
        TTTLEQKVKKPNSSS NNRTGRSTFQKCRF SPKSLK LQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQ VP AVP+ASSKA+QVPAT+DSHRTEAV
Subjt:  TTTLEQKVKKPNSSS-NNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAV

Query:  EDCIKYINAST
        EDCIKYINAST
Subjt:  EDCIKYINAST

A0A5D2PS21 Uncharacterized protein4.5e-0539.22Show/hide
Query:  VKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAVEDCIKYIN
        + K N+S+    G    +   F   K+ K   FSP+ FLKHL  K+ R LH ++MK  RP  K      V  +S ++     T+DSHRT A+EDCI++IN
Subjt:  VKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAVEDCIKYIN

Query:  AS
        +S
Subjt:  AS

A0A6A1VD78 Uncharacterized protein4.3e-0840.7Show/hide
Query:  QKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAVEDCIKYINAST
        Q CRF  PK  +     P+ FLKH+ADK+ RALH  +++R++  +     ++ P+       V  T+DSHRTEA+EDCI+++N+S+
Subjt:  QKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAVEDCIKYINAST

A0A6A3B894 Uncharacterized protein1.4e-0637.82Show/hide
Query:  MTTTLEQK---------VKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPAT
        M+T L QK         ++K N+ +    G S    C F      KRL+FSP+ FL+HL  KV++ LH ++MK  RP  K      V  +S ++     T
Subjt:  MTTTLEQK---------VKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPAT

Query:  IDSHRTEAVEDCIKYINAS
        +D+HRT A+EDCI++IN+S
Subjt:  IDSHRTEAVEDCIKYINAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07300.1 josephin protein-related9.9e-0535.82Show/hide
Query:  LKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQ--VPATIDSHRTEAVEDCIKYINAST
        +KHL  K  + L  + M++    +K+  P+ V   S ++    +P   DSHR+EA+EDCI++IN+S+
Subjt:  LKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQ--VPATIDSHRTEAVEDCIKYINAST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACAACATTGGAGCAGAAGGTTAAGAAACCGAACTCATCCAGCAACAACAGAACTGGGAGAAGCACTTTTCAAAAGTGTAGATTTCCATCCCCCAAATCGCTTAA
AAGACTGCAATTCTCTCCACTGTGCTTTCTAAAGCACCTAGCTGATAAAGTGACTCGAGCTTTGCATTTCATGGCTATGAAGAGAAATCGACCCCTTCAAAAACAACATG
TTCCAGCGGCCGTGCCCGTTGCGAGTTCGAAGGCAGTTCAGGTACCTGCCACCATCGATTCACATAGAACAGAGGCTGTGGAGGACTGCATCAAGTACATCAACGCTTCC
ACTTAG
mRNA sequenceShow/hide mRNA sequence
CTTCATGCGTGCAAAGCTTTCAATATTCCCTGTTTATCTTGACATCCGCATAAAGTTCATTATGTCTTTAGCTGTTGGATCAAATATTCAACGGTTGAGATTGTTTGATT
AATAAAGTGTTAGCCATTATATTGAATTGAATGACCCTCACTCTTGTTCGTTGCTTGATTGAGATTTAATACACAAAAACAAACAGAGCCTTGTTGAGTTTGCTTAAGAA
AGCTTGGTGGGCAGGCTGCATTTTTCAATCTCTCTTTTCCCTGCTTTACTTTTTCTTCCATTTGGTATTCCATTTCATTTTAATCTCTCTCTCTCTCTCTTTCTTTCTCT
CACTCTTGGCTCAGACCTTTCTTCTAATTCCATGACGACAACATTGGAGCAGAAGGTTAAGAAACCGAACTCATCCAGCAACAACAGAACTGGGAGAAGCACTTTTCAAA
AGTGTAGATTTCCATCCCCCAAATCGCTTAAAAGACTGCAATTCTCTCCACTGTGCTTTCTAAAGCACCTAGCTGATAAAGTGACTCGAGCTTTGCATTTCATGGCTATG
AAGAGAAATCGACCCCTTCAAAAACAACATGTTCCAGCGGCCGTGCCCGTTGCGAGTTCGAAGGCAGTTCAGGTACCTGCCACCATCGATTCACATAGAACAGAGGCTGT
GGAGGACTGCATCAAGTACATCAACGCTTCCACTTAGCTCACACCAAATTCTTGTAAGATTTTCTCCTGACAAATGCGTATATATGTGGGGTTTTTGTGGGTTTTAATGT
CTGATATCATATTGTTGCGGATCATGAATTATGATGCAATATGTTCTTGTTTAGATGAAAAAAACGTC
Protein sequenceShow/hide protein sequence
MTTTLEQKVKKPNSSSNNRTGRSTFQKCRFPSPKSLKRLQFSPLCFLKHLADKVTRALHFMAMKRNRPLQKQHVPAAVPVASSKAVQVPATIDSHRTEAVEDCIKYINAS
T