CuGenDBv2

Gene ID	CSPI06G14180
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	myosin heavy chain-related
Genome location	Chr6:12493893..12494833
RNA-Seq Expression	CSPI06G14180
Synteny	CSPI06G14180
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0061866.1 tropomyosin [Cucumis melo var. makuwa]

4.8e-41

87.5

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Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        MDAHHASLGRRTLEEIRQKRAAERLSK SSGPDLSTASKSNEVSGIRKSESGSR SEIDVGSLVSQIQD+QKKNAELE ++ VISSKLQSKEAEN MLQK
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        RLNEL  + +P+
Subjt:  RLNELVINALPN

XP_004143133.2 tropomyosin [Cucumis sativus]

4.2e-45

94.64

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Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        RLNEL  + +P+
Subjt:  RLNELVINALPN

XP_016903153.1 PREDICTED: tropomyosin [Cucumis melo]

4.8e-41

87.5

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Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        MDAHHASLGRRTLEEIRQKRAAERLSK SSGPDLSTASKSNEVSGIRKSESGSR SEIDVGSLVSQIQD+QKKNAELE ++ VISSKLQSKEAEN MLQK
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        RLNEL  + +P+
Subjt:  RLNELVINALPN

XP_023007072.1 tropomyosin [Cucurbita maxima]

9.9e-39

82.14

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Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        MDAHHASLGRRTLEEIRQKRAAERL K  SGPDLST SKSNE SGIRKSESGSR SE DVG LVSQIQD+QKKNAELEE++ +ISSKLQSKE ENG LQK
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        RLNEL  N +P+
Subjt:  RLNELVINALPN

XP_038901317.1 tropomyosin, muscle [Benincasa hispida]

1.1e-42

89.29

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Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNE SGIRKSESGSR SEIDVGSLVSQIQD+QKKNAELEE++ VISSKLQSKEAENGMLQK
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        +LNEL  N +P+
Subjt:  RLNELVINALPN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBQ3 Uncharacterized protein

1.1e-48

100

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Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        RLNELVINALPN
Subjt:  RLNELVINALPN

A0A1S4E4J2 tropomyosin

2.3e-41

87.5

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Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        MDAHHASLGRRTLEEIRQKRAAERLSK SSGPDLSTASKSNEVSGIRKSESGSR SEIDVGSLVSQIQD+QKKNAELE ++ VISSKLQSKEAEN MLQK
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        RLNEL  + +P+
Subjt:  RLNELVINALPN

A0A5A7V5U9 Tropomyosin

2.3e-41

87.5

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Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        MDAHHASLGRRTLEEIRQKRAAERLSK SSGPDLSTASKSNEVSGIRKSESGSR SEIDVGSLVSQIQD+QKKNAELE ++ VISSKLQSKEAEN MLQK
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        RLNEL  + +P+
Subjt:  RLNELVINALPN

A0A6J1G564 tropomyosin

1.1e-38

81.25

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Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        MDAHHASLGRRTLEEIRQKRAAERL K  SGPDLST SKSNE SGIRKSESGSR SE DVG LVSQIQD+QKKNAELEE++ +IS+KLQSKE ENG LQK
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        RLNEL  N +P+
Subjt:  RLNELVINALPN

A0A6J1KXK4 tropomyosin

4.8e-39

82.14

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Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        MDAHHASLGRRTLEEIRQKRAAERL K  SGPDLST SKSNE SGIRKSESGSR SE DVG LVSQIQD+QKKNAELEE++ +ISSKLQSKE ENG LQK
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        RLNEL  N +P+
Subjt:  RLNELVINALPN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G59210.1 myosin heavy chain-related

3.6e-31

63.39

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Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        M++HHASLGRRTLEEIRQKRAA+RLSK SSGPDLS      +   IRKSESG+R+SE DVG+L SQ++++QKKNAE+EE+  ++SSKLQ+KE EN  L+ 
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        RLN L  N +P+
Subjt:  RLNELVINALPN

AT5G59210.2 myosin heavy chain-related

3.6e-31

63.39

Show/hide

Query:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK
        M++HHASLGRRTLEEIRQKRAA+RLSK SSGPDLS      +   IRKSESG+R+SE DVG+L SQ++++QKKNAE+EE+  ++SSKLQ+KE EN  L+ 
Subjt:  MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQK

Query:  RLNELVINALPN
        RLN L  N +P+
Subjt:  RLNELVINALPN

Sequences

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CDS sequence

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ATGGATGCTCACCACGCATCGTTAGGTCGACGAACGCTGGAAGAGATTCGGCAAAAAAGAGCGGCCGAGAGATTGAGCAAAGTTTCTTCTGGACCAGATCTGAGTACAGC
CTCCAAATCAAATGAAGTCTCTGGTATTAGAAAATCAGAGAGCGGAAGTCGAATCTCAGAGATCGATGTGGGTAGTTTAGTATCTCAGATACAAGATATGCAGAAGAAGA
ATGCAGAATTAGAAGAACAAAGGACTGTCATAAGCTCAAAGCTTCAATCCAAGGAGGCTGAGAATGGCATGCTTCAAAAGCGATTGAATGAACTGGTAATTAATGCTCTT
CCAAACTGA

mRNA sequence

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Protein sequence

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MDAHHASLGRRTLEEIRQKRAAERLSKVSSGPDLSTASKSNEVSGIRKSESGSRISEIDVGSLVSQIQDMQKKNAELEEQRTVISSKLQSKEAENGMLQKRLNELVINAL
PN

CSPI06G14180 (gene) of Cucumber (PI 183967) v1 genome