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CSPI06G14230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G14230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionMajor viral transcription factor
Genome locationChr6:12526422..12527088
RNA-Seq ExpressionCSPI06G14230
SyntenyCSPI06G14230
Gene Ontology termsNA
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061869.1 uncharacterized protein E6C27_scaffold89G001110 [Cucumis melo var. makuwa]1.8e-5895.2Show/hide
Query:  MENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAV
        MENE KPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASND  SKAILPLLSPLPLSPQPLPEIDGNRISA GNAV+GGGGNGDQRGIGFVAPGGWQHPAV
Subjt:  MENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAV

Query:  AATFPDPSTLFTFFQSQCMVSSNTP
        AATFPDPSTLFTFFQSQC+VSSNTP
Subjt:  AATFPDPSTLFTFFQSQCMVSSNTP

KAG6605440.1 hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sororia]5.4e-5077.14Show/hide
Query:  MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR
        M+ANQ  VVDF   +ME E+K RLPKPPTRLQKQAPASLHLDQL+SVSMSS S DI SKAILPLLSPLP SPQP PE +GNR +ANGN VD  GG GDQR
Subjt:  MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR

Query:  GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP
        GI F  PGGWQHPAVA TF DPSTLFTFFQSQC+V+S TP
Subjt:  GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP

XP_011657141.1 uncharacterized protein LOC105435808 [Cucumis sativus]1.9e-71100Show/hide
Query:  MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR
        MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR
Subjt:  MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR

Query:  GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP
        GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP
Subjt:  GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP

XP_023512816.1 uncharacterized protein LOC111777440 [Cucurbita pepo subsp. pepo]5.0e-4871.43Show/hide
Query:  MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR
        M+ANQ+ VVDFLR +M+NE   R+PKPPTRLQKQAPA L+LDQLSSVSMSS   +I SK +LPLLSPLP SPQP  E +GNR+  NGN  D  GGNGDQR
Subjt:  MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR

Query:  GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP
        GI F +PGGWQHPAVAAT+ DPSTLFTFFQS+C+++SNTP
Subjt:  GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP

XP_038902307.1 uncharacterized protein LOC120088941 [Benincasa hispida]1.6e-6592.14Show/hide
Query:  MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR
        M+ANQTVV+DFLRGSMENE+K RLPKPPTRLQKQAPASLHLDQLSSVSMSS S D CSKAILPLLSPLPLSPQPLPEIDGNRISANGNA DGGGGNGDQR
Subjt:  MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR

Query:  GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP
        GIGF APGGWQHPAVAATFPDPSTLFTFFQSQC+V+SNTP
Subjt:  GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP

TrEMBL top hitse value%identityAlignment
A0A0A0KBQ7 Uncharacterized protein9.2e-72100Show/hide
Query:  MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR
        MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR
Subjt:  MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQR

Query:  GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP
        GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP
Subjt:  GIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP

A0A5A7V856 Uncharacterized protein8.9e-5995.2Show/hide
Query:  MENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAV
        MENE KPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASND  SKAILPLLSPLPLSPQPLPEIDGNRISA GNAV+GGGGNGDQRGIGFVAPGGWQHPAV
Subjt:  MENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAV

Query:  AATFPDPSTLFTFFQSQCMVSSNTP
        AATFPDPSTLFTFFQSQC+VSSNTP
Subjt:  AATFPDPSTLFTFFQSQCMVSSNTP

A0A6J1D5B7 uncharacterized protein LOC1110170713.8e-2568.22Show/hide
Query:  MSANQTVVVDFLRGSMENEY--KPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEID---GNRIS-ANGNAVDGGG
        M+ANQ+ V+DFLR SME E+  K R+PKPPTRLQKQAPASLHLDQ+SS SM+    +  SKAILPLLSPLPLSPQP PE +    NR+S AN NAVDGG 
Subjt:  MSANQTVVVDFLRGSMENEY--KPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEID---GNRIS-ANGNAVDGGG

Query:  GNGDQRG
          GDQRG
Subjt:  GNGDQRG

A0A6P3ZH11 uncharacterized protein LOC1074110181.1e-1653.51Show/hide
Query:  KPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNR---ISANGNAVDGGGGNGDQRGIGFVAPG-GWQHPAVAATFPD
        KPPTRLQK+APASL LDQ+ + + + + N+  SKAI PLLSPL LSPQPLPE+   R    +A+ + V+      D+R      P  GWQHPAV  TF D
Subjt:  KPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNR---ISANGNAVDGGGGNGDQRGIGFVAPG-GWQHPAVAATFPD

Query:  PSTLFTFFQSQCMV
        PS+LF FFQSQC++
Subjt:  PSTLFTFFQSQCMV

A0A7J7DE91 Uncharacterized protein9.3e-1644.8Show/hide
Query:  FLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGW
        F R  +E++ K R+ KPPTRLQK+APASL LDQ     +++  N   +   +PLLSPL +SP PL E +      N    DGG    +  G      GGW
Subjt:  FLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGW

Query:  QHPAVAATFPDPSTLFTFFQSQCMV
        QHPAV A + +PS +F FFQSQC++
Subjt:  QHPAVAATFPDPSTLFTFFQSQCMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07473.1 unknown protein1.5e-0546.3Show/hide
Query:  KPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQP
        K   P+ PTRLQKQAP +LHL  +        S+D+     +PLLSPL +SP P
Subjt:  KPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAAATCAAACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAGAACGAATACAAACCCAGATTGCCTAAACCTCCAACCAGGTTGCAGAAGCAGGCGCCGGC
CAGTCTTCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGCTAGTAACGACATTTGTTCCAAGGCGATTCTTCCTCTCCTATCGCCACTTCCTCTATCGCCACAGC
CCTTGCCTGAAATCGACGGAAATAGAATATCTGCAAACGGAAATGCCGTAGACGGCGGCGGTGGTAATGGGGATCAAAGAGGAATAGGTTTTGTAGCTCCTGGTGGTTGG
CAACATCCGGCAGTGGCAGCGACATTTCCTGATCCTTCTACGCTGTTTACTTTCTTTCAATCGCAATGCATGGTAAGCAGTAACACACCGTAA
mRNA sequenceShow/hide mRNA sequence
GTTAAAGAACAATTCACCCTCTTCTTTCATTTGTTTGCCTTATATTTCTCCTCCAATGAGTGCAAATCAAACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAGAACG
AATACAAACCCAGATTGCCTAAACCTCCAACCAGGTTGCAGAAGCAGGCGCCGGCCAGTCTTCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGCTAGTAACGAC
ATTTGTTCCAAGGCGATTCTTCCTCTCCTATCGCCACTTCCTCTATCGCCACAGCCCTTGCCTGAAATCGACGGAAATAGAATATCTGCAAACGGAAATGCCGTAGACGG
CGGCGGTGGTAATGGGGATCAAAGAGGAATAGGTTTTGTAGCTCCTGGTGGTTGGCAACATCCGGCAGTGGCAGCGACATTTCCTGATCCTTCTACGCTGTTTACTTTCT
TTCAATCGCAATGCATGGTAAGCAGTAACACACCGTAAGAAGAAGATGGAGATTGTGGATCGATTCTCGCGTCTGATTATCTACGTAAATCCACCAATGTACATTATGAT
GTATGTGCGTGTGTGCGCGTGTGTGTTTGTTCATCAATTCCGTTAAGATCTCCATGAATACTTCCTCTGGTTTTAAGATTTCACACACTTCATCTTACTCATAATTTAAC
ACCCTGC
Protein sequenceShow/hide protein sequence
MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGW
QHPAVAATFPDPSTLFTFFQSQCMVSSNTP