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CSPI06G14810 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G14810
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDynein beta chain, ciliary protein
Genome locationChr6:12905230..12908176
RNA-Seq ExpressionCSPI06G14810
SyntenyCSPI06G14810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013632.1 hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma]4.9e-8386.24Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDS +ASSLKMES+VDRKPPPR AEKARESGALDSGDV  S+S N+LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS
        Y RPMP+LR+T++ SSKYEDRPAPPGTLNVAQMR IILLHEGKA+DHDGPMG++QIAERYNV VAQI+TILQFLSLPPEDSL+DK K S
Subjt:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS

XP_008458465.1 PREDICTED: uncharacterized protein LOC103497865 isoform X1 [Cucumis melo]1.3e-9496.3Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DSTTASSLKMESIVDRKPPPRVAEKARESG+LDSGDV ASDSGN LEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS
        YGRPMPKLRDTNI SSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMG HQIAERYNVSVAQIQTILQFLSLPPEDSLRDKI DS
Subjt:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS

XP_011657169.1 uncharacterized protein LOC101223121 [Cucumis sativus]1.1e-98100Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS
        YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS
Subjt:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS

XP_022958820.1 uncharacterized protein LOC111459975 [Cucurbita moschata]6.5e-8386.24Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDS +ASSLKMES+VDRKPPPR AEKARESGALDSGDV  S+S N+LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS
        Y RPMP+LR+T++ SSKYEDRPAPPGTLNVAQMR I+LLHEGKA+DHDGPMG++QIAERYNV VAQI+TILQFLSLPPEDSLRDK K S
Subjt:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS

XP_023006464.1 uncharacterized protein LOC111499180 [Cucurbita maxima]1.2e-8487.3Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDS +ASSLKMES+VDRKPPPR AEKARESG+LDSGDV  S+SGN+LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS
        Y RPMPKLR+T++ SSKYEDRPAPPGTLNVAQMR IILLHEGKADDHDGPMG++QIAERYNV V+QI+TILQFLSLPPEDSLRDK K S
Subjt:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS

TrEMBL top hitse value%identityAlignment
A0A0A0KCC5 Uncharacterized protein5.3e-99100Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS
        YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS
Subjt:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS

A0A1S3C957 uncharacterized protein LOC103497865 isoform X16.1e-9596.3Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASS+DSTTASSLKMESIVDRKPPPRVAEKARESG+LDSGDV ASDSGN LEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS
        YGRPMPKLRDTNI SSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMG HQIAERYNVSVAQIQTILQFLSLPPEDSLRDKI DS
Subjt:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS

A0A6J1C9H1 uncharacterized protein LOC1110095507.0e-7578.24Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKA-----RESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEA
        MGQAFRRAAGRIKPASSIDS TASSLKMES+VDR+PPPR  +KA     RESGALDSG +  S+S N+ EERDPQFDAML QMVGRIKSKPGGKLEMGEA
Subjt:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKA-----RESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEA

Query:  SVVERYGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKD
        +VVERY RPMPKLR+T++ SS+YEDRPAPPGTLNVAQMR +I LHEGKA+DH+G M + QIA+RYNVSV QI TILQFLSLPPED+LR K KD
Subjt:  SVVERYGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKD

A0A6J1H4J6 uncharacterized protein LOC1114599753.1e-8386.24Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDS +ASSLKMES+VDRKPPPR AEKARESGALDSGDV  S+S N+LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS
        Y RPMP+LR+T++ SSKYEDRPAPPGTLNVAQMR I+LLHEGKA+DHDGPMG++QIAERYNV VAQI+TILQFLSLPPEDSLRDK K S
Subjt:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS

A0A6J1L288 uncharacterized protein LOC1114991805.7e-8587.3Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER
        MGQAFRRAAGRIKPASSIDS +ASSLKMES+VDRKPPPR AEKARESG+LDSGDV  S+SGN+LEERDPQFDAMLSQM GRI+SKPGGKLEMGEASVVER
Subjt:  MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVER

Query:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS
        Y RPMPKLR+T++ SSKYEDRPAPPGTLNVAQMR IILLHEGKADDHDGPMG++QIAERYNV V+QI+TILQFLSLPPEDSLRDK K S
Subjt:  YGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21400.1 unknown protein1.3e-4451.85Show/hide
Query:  MGQAFRRAAGRIKPASSIDSTTAS----SLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEAS
        MGQ  RRA G+IK       +  S    SL  E +   K  P     A   G  D G   + D  N+LEERDP++D ML+QMVGRIK+KPGGK EMGEAS
Subjt:  MGQAFRRAAGRIKPASSIDSTTAS----SLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEAS

Query:  VVERYGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDK
        VVE   RP+PKLR+T   S++YE+ P P GTLNVAQ+R I+LL +GK+ DH GPMG+++IAE+Y + V+Q+Q I QFLSLP E + + K
Subjt:  VVERYGRPMPKLRDTNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAGGCATTTCGTCGAGCAGCTGGAAGAATCAAACCGGCTTCGAGTATTGATTCCACTACCGCCTCTTCGTTGAAAATGGAAAGCATCGTCGATCGGAAGCCTCC
GCCGCGTGTGGCCGAGAAGGCTCGGGAGAGTGGCGCTCTTGATTCCGGTGATGTCCCGGCAAGTGATTCGGGAAACATGCTTGAAGAACGAGATCCCCAATTTGATGCCA
TGCTTAGCCAAATGGTGGGTCGGATAAAATCAAAGCCCGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGATACGGAAGACCAATGCCAAAGCTAAGAGAT
ACAAATATAAGTTCAAGTAAATACGAGGATCGGCCAGCCCCACCAGGAACACTAAACGTAGCACAGATGCGACAAATAATTCTCTTACACGAAGGTAAGGCCGATGATCA
TGATGGGCCAATGGGACTTCACCAAATTGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAAACCATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAG
ACAAAATCAAGGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
GCCCCTCGAGTTTCGAACTCACTAAAATACGAGTCACGACTCACCCGATTCCTCATTTCATCTCCATCTCCTTTCCCCCTGAAAATTTCTCGTAAAACCCTCCGTCTCGT
AGGGTTCTGATCAATTTTTGTACGAATCTGAACCTCTGATTCCAGTTCGTTTTGTGAGATCGTTGCTCTTTTTGAAGAAGGAAAGGATGGGACAGGCATTTCGTCGAGCA
GCTGGAAGAATCAAACCGGCTTCGAGTATTGATTCCACTACCGCCTCTTCGTTGAAAATGGAAAGCATCGTCGATCGGAAGCCTCCGCCGCGTGTGGCCGAGAAGGCTCG
GGAGAGTGGCGCTCTTGATTCCGGTGATGTCCCGGCAAGTGATTCGGGAAACATGCTTGAAGAACGAGATCCCCAATTTGATGCCATGCTTAGCCAAATGGTGGGTCGGA
TAAAATCAAAGCCCGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGATACGGAAGACCAATGCCAAAGCTAAGAGATACAAATATAAGTTCAAGTAAATAC
GAGGATCGGCCAGCCCCACCAGGAACACTAAACGTAGCACAGATGCGACAAATAATTCTCTTACACGAAGGTAAGGCCGATGATCATGATGGGCCAATGGGACTTCACCA
AATTGCTGAAAGGTATAATGTTAGTGTTGCTCAAATACAAACCATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAGACAAAATCAAGGATTCTTAATTGA
ACAGGAATGGAGCCATGAAAACAACGGTAGGGGCGATTTGCTCCTAAGAAGAAATAATAAAGGTTCCAAAAGTTTTCTCAATTATTTTATACCGAG
Protein sequenceShow/hide protein sequence
MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDSGNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRD
TNISSSKYEDRPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPEDSLRDKIKDS