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CSPI06G14920 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G14920
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein RALF-like 4
Genome locationChr6:13000886..13001554
RNA-Seq ExpressionCSPI06G14920
SyntenyCSPI06G14920
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148669.1 protein RALF-like 19 [Cucumis sativus]6.2e-3673.04Show/hide
Query:  LCL-LLLVAAIAITLPVALC-DWTRAYGN-PDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPY
        LCL LLL+A +A  L +AL  DWTR+Y + PDY F         N  +DSRRLLFQYGFAYKYPKNKYLGYDALRKNN PCRHRG SYYDC KR+KANPY
Subjt:  LCL-LLLVAAIAITLPVALC-DWTRAYGN-PDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPY

Query:  RRGCIAITGCARFTD
        RRGCIAITGCARFTD
Subjt:  RRGCIAITGCARFTD

XP_004150814.1 protein RALF-like 4 [Cucumis sativus]2.3e-62100Show/hide
Query:  MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP
        MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP
Subjt:  MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP

Query:  YRRGCIAITGCARFTD
        YRRGCIAITGCARFTD
Subjt:  YRRGCIAITGCARFTD

XP_008441015.1 PREDICTED: protein RALF-like 19 [Cucumis melo]5.6e-3773.5Show/hide
Query:  MKLGLCLLLLVAAIAITLPVALC-DWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKAN
        MKLGL  LL++A +A  L +A   DWT AY  P+Y F       T N+ +DSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRG SYYDC KRRKAN
Subjt:  MKLGLCLLLLVAAIAITLPVALC-DWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKAN

Query:  PYRRGCIAITGCARFTD
        PYRRGCIAITGCARFTD
Subjt:  PYRRGCIAITGCARFTD

XP_016902249.1 PREDICTED: protein RALF-like 4 [Cucumis melo]8.4e-5792.24Show/hide
Query:  MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP
        MKL LCLLLLVAA A TLPVALCDWTRA+GNP+YAFWG + PATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCR RGHSYYDCTKRRKANP
Subjt:  MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP

Query:  YRRGCIAITGCARFTD
        YRRGCIAITGCARFTD
Subjt:  YRRGCIAITGCARFTD

XP_038876152.1 uncharacterized protein LOC120068449 [Benincasa hispida]3.3e-3766.96Show/hide
Query:  LCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRG
        LCL LL+ A    L  A  DWT AYG P+YAFWG++ P     ++D+RRLLFQYGFAYKYP+N+YL Y+ALRKNN PC HRG SYYDC + +KANPYRRG
Subjt:  LCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRG

Query:  CIAITGCARFTD
        C AITGCARFTD
Subjt:  CIAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A0A0KCD7 F3H9.8 protein1.1e-62100Show/hide
Query:  MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP
        MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP
Subjt:  MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP

Query:  YRRGCIAITGCARFTD
        YRRGCIAITGCARFTD
Subjt:  YRRGCIAITGCARFTD

A0A1S3B2H7 protein RALF-like 192.7e-3773.5Show/hide
Query:  MKLGLCLLLLVAAIAITLPVALC-DWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKAN
        MKLGL  LL++A +A  L +A   DWT AY  P+Y F       T N+ +DSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRG SYYDC KRRKAN
Subjt:  MKLGLCLLLLVAAIAITLPVALC-DWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKAN

Query:  PYRRGCIAITGCARFTD
        PYRRGCIAITGCARFTD
Subjt:  PYRRGCIAITGCARFTD

A0A1S4E1Z3 protein RALF-like 44.0e-5792.24Show/hide
Query:  MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP
        MKL LCLLLLVAA A TLPVALCDWTRA+GNP+YAFWG + PATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCR RGHSYYDCTKRRKANP
Subjt:  MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP

Query:  YRRGCIAITGCARFTD
        YRRGCIAITGCARFTD
Subjt:  YRRGCIAITGCARFTD

A0A5A7SVY5 Protein RALF-like 44.0e-5792.24Show/hide
Query:  MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP
        MKL LCLLLLVAA A TLPVALCDWTRA+GNP+YAFWG + PATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCR RGHSYYDCTKRRKANP
Subjt:  MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANP

Query:  YRRGCIAITGCARFTD
        YRRGCIAITGCARFTD
Subjt:  YRRGCIAITGCARFTD

A0A5D3DPV5 Protein RALF-like 192.7e-3773.5Show/hide
Query:  MKLGLCLLLLVAAIAITLPVALC-DWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKAN
        MKLGL  LL++A +A  L +A   DWT AY  P+Y F       T N+ +DSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRG SYYDC KRRKAN
Subjt:  MKLGLCLLLLVAAIAITLPVALC-DWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKAN

Query:  PYRRGCIAITGCARFTD
        PYRRGCIAITGCARFTD
Subjt:  PYRRGCIAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 191.0e-1238.46Show/hide
Query:  MKLGLCLLLLVAAIAITLPVALCDW--TRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKA
        M + + L+L +  +A+    A   W  T++  N         E   + D + +RR L          +  Y+ Y ALRKNN PC  RG SYYDC KR++A
Subjt:  MKLGLCLLLLVAAIAITLPVALCDW--TRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKA

Query:  NPYRRGCIAITGCARFT
        NPYRRGC  IT C R T
Subjt:  NPYRRGCIAITGCARFT

Q8L9P8 Protein RALF-like 334.7e-1045.33Show/hide
Query:  TAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR
        TAE     D + +RR+L            KY+ Y ALR+N  PC  RG SYY+C +  +ANPY RGC AIT C R
Subjt:  TAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR

Q9FZA0 Protein RALF-like 45.3e-1441.96Show/hide
Query:  GLCLLLLVA-AIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYR
        GL +L +VA ++  T P+     T++  N         E  ++ D + +RR L +          +Y+GYDAL+KNN PC  RG SYYDC KRR+ NPYR
Subjt:  GLCLLLLVA-AIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYR

Query:  RGCIAITGCARF
        RGC AIT C R+
Subjt:  RGCIAITGCARF

Q9LUS7 Rapid alkalinization factor 239.4e-1138.54Show/hide
Query:  VALCDWTRAYGNPDYAFWGTAEPATINDVDD--SRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR
        +A C  + A G+    F+G  E     ++D   +RR+L            +Y+ Y ALR+N  PC  RG SYY+C +  +ANPY RGC AIT C R
Subjt:  VALCDWTRAYGNPDYAFWGTAEPATINDVDD--SRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR

Q9MA62 Protein RALF-like 226.1e-1047.76Show/hide
Query:  DVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR
        D D SRR+L Q          KY+ Y A+R+N+ PC  RG SYY+C +  +ANPY RGC  IT C R
Subjt:  DVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 43.8e-1541.96Show/hide
Query:  GLCLLLLVA-AIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYR
        GL +L +VA ++  T P+     T++  N         E  ++ D + +RR L +          +Y+GYDAL+KNN PC  RG SYYDC KRR+ NPYR
Subjt:  GLCLLLLVA-AIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYR

Query:  RGCIAITGCARF
        RGC AIT C R+
Subjt:  RGCIAITGCARF

AT2G33775.1 ralf-like 197.1e-1438.46Show/hide
Query:  MKLGLCLLLLVAAIAITLPVALCDW--TRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKA
        M + + L+L +  +A+    A   W  T++  N         E   + D + +RR L          +  Y+ Y ALRKNN PC  RG SYYDC KR++A
Subjt:  MKLGLCLLLLVAAIAITLPVALCDW--TRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKA

Query:  NPYRRGCIAITGCARFT
        NPYRRGC  IT C R T
Subjt:  NPYRRGCIAITGCARFT

AT3G05490.1 ralf-like 224.3e-1147.76Show/hide
Query:  DVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR
        D D SRR+L Q          KY+ Y A+R+N+ PC  RG SYY+C +  +ANPY RGC  IT C R
Subjt:  DVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR

AT3G16570.1 rapid alkalinization factor 236.7e-1238.54Show/hide
Query:  VALCDWTRAYGNPDYAFWGTAEPATINDVDD--SRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR
        +A C  + A G+    F+G  E     ++D   +RR+L            +Y+ Y ALR+N  PC  RG SYY+C +  +ANPY RGC AIT C R
Subjt:  VALCDWTRAYGNPDYAFWGTAEPATINDVDD--SRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR

AT4G15800.1 ralf-like 333.3e-1145.33Show/hide
Query:  TAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR
        TAE     D + +RR+L            KY+ Y ALR+N  PC  RG SYY+C +  +ANPY RGC AIT C R
Subjt:  TAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTCGGTCTCTGTCTCCTCCTACTCGTAGCTGCCATCGCCATCACTCTTCCTGTTGCCTTATGTGATTGGACTCGTGCCTATGGTAACCCCGACTACGCCTTTTG
GGGCACGGCTGAACCGGCGACGATAAATGATGTTGATGACAGCAGACGACTACTTTTCCAATATGGATTTGCTTACAAATATCCAAAGAATAAGTATTTGGGTTATGATG
CACTTAGGAAGAACAACTCCCCTTGCCGTCATCGTGGACACTCTTATTATGACTGTACGAAGCGCCGAAAGGCCAACCCTTATCGTCGTGGGTGCATCGCTATCACTGGT
TGTGCTCGATTCACGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATTTCTATTAGGAAACAAAGACGCAGAGCCTAAAACTTTTATTTAAAAAAAAAAACACACAAAAACAAAATCTATAATTGCTATGAAGCTCGGTCTCTGTCTCCTCCTAC
TCGTAGCTGCCATCGCCATCACTCTTCCTGTTGCCTTATGTGATTGGACTCGTGCCTATGGTAACCCCGACTACGCCTTTTGGGGCACGGCTGAACCGGCGACGATAAAT
GATGTTGATGACAGCAGACGACTACTTTTCCAATATGGATTTGCTTACAAATATCCAAAGAATAAGTATTTGGGTTATGATGCACTTAGGAAGAACAACTCCCCTTGCCG
TCATCGTGGACACTCTTATTATGACTGTACGAAGCGCCGAAAGGCCAACCCTTATCGTCGTGGGTGCATCGCTATCACTGGTTGTGCTCGATTCACGGATTAAGTTTTTA
AAATGATCCATTAATGGAAAATTATATATTTTTATAATTTAACGGAATTTATTTTTAGTTTTATTTACTTTATGATCAAATCTTGATGTTGGGAATAAATTCTGTTATTT
GCTTGTTTATATTTCTTACTGTATTCCTTGATTGTAATGTGTGCTTTTCTTGTATGTATGCTTTTATGGGTTGTGTTCTTGTTTGAAATTTAAATAAAATTATTATATTT
ACATTTACA
Protein sequenceShow/hide protein sequence
MKLGLCLLLLVAAIAITLPVALCDWTRAYGNPDYAFWGTAEPATINDVDDSRRLLFQYGFAYKYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITG
CARFTD