; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G15000 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G15000
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationChr6:13101203..13102704
RNA-Seq ExpressionCSPI06G15000
SyntenyCSPI06G15000
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN71445.1 hypothetical protein VITISV_042489 [Vitis vinifera]1.8e-10045.67Show/hide
Query:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVT------------------------------------
        M+I NKM IHG+K EDVTIVEKILR MTP FNFVVCSIEES DI+ LSIDELQSSLL+HE+K                                      
Subjt:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVT------------------------------------

Query:  ---NQHSKEIEDE------EDGDLKA--EEATIVAANKDTINTKRINFKEEEEEEERKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNH
           NQH  + +D       + G+     +  +   +N +     R    + E      ++  ERT+FAEKE+E+S LM CH N+ T  N+WY+DT C+NH
Subjt:  ---NQHSKEIEDE------EDGDLKA--EEATIVAANKDTINTKRINFKEEEEEEERKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNH

Query:  MCGDKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRM
        MCGDK AFS+LDE+FRN+V FGDNS VSV+ K                               GQL EKGYE+ IKDG+ RIQD ++ LIAQVNMT NRM
Subjt:  MCGDKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRM

Query:  FPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-------
        FPLYL NTT +CFSVKL D  WLWHFRYGHLNF  LKTLQ K+MVTGLP I+  +++CEE                    KV+E   +   G        
Subjt:  FPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-------

Query:  -------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM
                           F  +KSEAF  F+S+K+ VEKE    IKI   D GGEY S+EF  FC+N+GI++QLT AY+PQQNG  ERKN T+LNM
Subjt:  -------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM

CAN74303.1 hypothetical protein VITISV_032980 [Vitis vinifera]4.9e-10346.12Show/hide
Query:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDGDLKAEEATIVAANKDTINTK---
        M+I NKMRIHG+K EDVTIVEKILR MTP FNFVVCSIEES DI+ LSIDELQSSLL+HE+K   Q      ++E+  LKA     +A   D    +   
Subjt:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDGDLKAEEATIVAANKDTINTK---

Query:  --RINFKEEEEEEERKEEN------------------------------------------------GERTHFAEKEDEISFLMVCHVNEATQQNMWYLD
          R N+    + + ++++N                                                 ERT+FAEKE+E+S LM CH N+ T  N+WY+D
Subjt:  --RINFKEEEEEEERKEEN------------------------------------------------GERTHFAEKEDEISFLMVCHVNEATQQNMWYLD

Query:  TGCNNHMCGDKKAFSELDESFRNTVKFGDNSTVSVLEKG-------------------------------QLLEKGYELSIKDGIFRIQDGEMDLIAQVN
        TGC+NHMCGDK AFS+LDE+FR +V FGDNS VSV+ KG                               QL EKGYE+ IKDG+ RIQD ++ LIAQVN
Subjt:  TGCNNHMCGDKKAFSELDESFRNTVKFGDNSTVSVLEKG-------------------------------QLLEKGYELSIKDGIFRIQDGEMDLIAQVN

Query:  MTANRMFPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-
        MT NRMFPLYL NTT +CFS KL D  WLWHFRYGHLNF GLKTLQQK+MVTGLP I  P+++CEE                    KV+E   +   G  
Subjt:  MTANRMFPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-

Query:  -------------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTL
                                 F  +KSEAF  F+S+K+ VEKE    IKI   D GGEY S+EF  FC+N+GI++QLT AY+PQQNG   RKNRT+
Subjt:  -------------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTL

Query:  LNM
        LNM
Subjt:  LNM

RDX79473.1 putative mitochondrial protein, partial [Mucuna pruriens]7.9e-9350.73Show/hide
Query:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDG---DLKAEEATIVAANKDTINTK
        M+I NKMRIHG+K +D+TIVEKIL  MTPKFNFVVCSI+E  DIE LSIDELQ               KE E+EE+    + +A EA I+A NK+  NT 
Subjt:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDG---DLKAEEATIVAANKDTINTK

Query:  RINFKEEEEEEER----------------------------KEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNHMCGDKKAFSELDESFR
        RIN  EEEE EE                              ++NG++T+ AEKE+E+S LMVCH+ E TQQNMWYLDTGCNNHMCG+K  FS+LDE+F 
Subjt:  RINFKEEEEEEER----------------------------KEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNHMCGDKKAFSELDESFR

Query:  NTVKFGDNSTVSVLEK--------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRMFPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTL
        NT+KFGDNSTVS+L K        GQL EKGYE+SIKDG+  I+D  + LIA++ MT NRMFPLYL NT+HSC S KLKD  WLWHFRYGHLNF GLKTL
Subjt:  NTVKFGDNSTVSVLEK--------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRMFPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTL

Query:  QQKDMVTGLPQIEVPAEVCEEKVMESKETIGVGAFRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLTA-YTPQQNG
         QK+MVT +PQI  P EV EE V+  +               F   +S++ +                             K +GIKRQLTA YT QQNG
Subjt:  QQKDMVTGLPQIEVPAEVCEEKVMESKETIGVGAFRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLTA-YTPQQNG

Query:  VYERKNRTLLNM
          ERKN T++N+
Subjt:  VYERKNRTLLNM

RVW63136.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.1e-8943.52Show/hide
Query:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDGDLKA---EEATIVAANKDTINTK
        M+I NKMRIHGEK+EDVT++EKILR MTPKFN+VVCSIEESKD++ LSIDELQ SLL+HEQK+        ED+E+  LKA     A  +  + D    K
Subjt:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDGDLKA---EEATIVAANKDTINTK

Query:  ----RINFKEEEEEEE-------------------------------------RKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNHMCG
            R NF+ +E++ +                                       +E GE++++AEK++  + LM   VNE  Q  +WY+DTGC+NHMCG
Subjt:  ----RINFKEEEEEEE-------------------------------------RKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNHMCG

Query:  DKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRMFPL
         K +F  L+E FR+TV FGD STV+V+ K                               GQL EKGY ++I+ G   I D     IA V M +NR+FPL
Subjt:  DKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRMFPL

Query:  YLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEEKVM-----------ESKETIGV---------------------
         + ++  S    ++KD+ WLWH RYGHLNF GLKTLQQK MVTGLPQI +P++VCEE V+           +S+    V                     
Subjt:  YLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEEKVM-----------ESKETIGV---------------------

Query:  --------------GAFRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM
                       +F  +KSEAF AF+S+K +VEKE G SIKIL  DRGGEY S EFE FC + GI+R+LT AYTPQQNGV ERKNRT+LNM
Subjt:  --------------GAFRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM

RVW92024.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.3e-10747.48Show/hide
Query:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVT------------------------------------
        M+I NKMRIHG+K EDVTIVEKILR MTP FNFVVCSIEES DI+ LSIDELQSSLL+HE+K                                      
Subjt:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVT------------------------------------

Query:  ---NQHSKEIEDE------EDGDLKA--EEATIVAANKDTINTKRINFKEEEEEEERKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNH
           NQH  + +D       + G+     +  +   +N +     R    + E      ++ GERT+FAEKE+E+S LM CH N+ T  N+WY+DTGC+NH
Subjt:  ---NQHSKEIEDE------EDGDLKA--EEATIVAANKDTINTKRINFKEEEEEEERKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNH

Query:  MCGDKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRM
        MCGDK AFS+LDE+FRN+V FGDNS VSV+ K                               GQL EKGYE+ IKDG+ RIQD ++ LIAQVNMT NRM
Subjt:  MCGDKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRM

Query:  FPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-------
        FPLYL NTT +CFS KL D  WLWHFRYGHLNF GLKTLQQK+MVTGLP I+ P+++CEE                    KV+E   +   G        
Subjt:  FPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-------

Query:  -------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM
                           F  +KSEAF  F+S+K+ VEKE G  IKI   DRGGEY S+EF  FC+N+GI++QLT AY+PQQNGV ERKNRT+LNM
Subjt:  -------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM

TrEMBL top hitse value%identityAlignment
A0A371FN12 Putative mitochondrial protein (Fragment)3.8e-9350.73Show/hide
Query:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDG---DLKAEEATIVAANKDTINTK
        M+I NKMRIHG+K +D+TIVEKIL  MTPKFNFVVCSI+E  DIE LSIDELQ               KE E+EE+    + +A EA I+A NK+  NT 
Subjt:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDG---DLKAEEATIVAANKDTINTK

Query:  RINFKEEEEEEER----------------------------KEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNHMCGDKKAFSELDESFR
        RIN  EEEE EE                              ++NG++T+ AEKE+E+S LMVCH+ E TQQNMWYLDTGCNNHMCG+K  FS+LDE+F 
Subjt:  RINFKEEEEEEER----------------------------KEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNHMCGDKKAFSELDESFR

Query:  NTVKFGDNSTVSVLEK--------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRMFPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTL
        NT+KFGDNSTVS+L K        GQL EKGYE+SIKDG+  I+D  + LIA++ MT NRMFPLYL NT+HSC S KLKD  WLWHFRYGHLNF GLKTL
Subjt:  NTVKFGDNSTVSVLEK--------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRMFPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTL

Query:  QQKDMVTGLPQIEVPAEVCEEKVMESKETIGVGAFRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLTA-YTPQQNG
         QK+MVT +PQI  P EV EE V+  +               F   +S++ +                             K +GIKRQLTA YT QQNG
Subjt:  QQKDMVTGLPQIEVPAEVCEEKVMESKETIGVGAFRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLTA-YTPQQNG

Query:  VYERKNRTLLNM
          ERKN T++N+
Subjt:  VYERKNRTLLNM

A0A438FT48 Retrovirus-related Pol polyprotein from transposon TNT 1-945.2e-9043.52Show/hide
Query:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDGDLKA---EEATIVAANKDTINTK
        M+I NKMRIHGEK+EDVT++EKILR MTPKFN+VVCSIEESKD++ LSIDELQ SLL+HEQK+        ED+E+  LKA     A  +  + D    K
Subjt:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDGDLKA---EEATIVAANKDTINTK

Query:  ----RINFKEEEEEEE-------------------------------------RKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNHMCG
            R NF+ +E++ +                                       +E GE++++AEK++  + LM   VNE  Q  +WY+DTGC+NHMCG
Subjt:  ----RINFKEEEEEEE-------------------------------------RKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNHMCG

Query:  DKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRMFPL
         K +F  L+E FR+TV FGD STV+V+ K                               GQL EKGY ++I+ G   I D     IA V M +NR+FPL
Subjt:  DKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRMFPL

Query:  YLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEEKVM-----------ESKETIGV---------------------
         + ++  S    ++KD+ WLWH RYGHLNF GLKTLQQK MVTGLPQI +P++VCEE V+           +S+    V                     
Subjt:  YLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEEKVM-----------ESKETIGV---------------------

Query:  --------------GAFRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM
                       +F  +KSEAF AF+S+K +VEKE G SIKIL  DRGGEY S EFE FC + GI+R+LT AYTPQQNGV ERKNRT+LNM
Subjt:  --------------GAFRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM

A0A438I5N6 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-10747.48Show/hide
Query:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVT------------------------------------
        M+I NKMRIHG+K EDVTIVEKILR MTP FNFVVCSIEES DI+ LSIDELQSSLL+HE+K                                      
Subjt:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVT------------------------------------

Query:  ---NQHSKEIEDE------EDGDLKA--EEATIVAANKDTINTKRINFKEEEEEEERKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNH
           NQH  + +D       + G+     +  +   +N +     R    + E      ++ GERT+FAEKE+E+S LM CH N+ T  N+WY+DTGC+NH
Subjt:  ---NQHSKEIEDE------EDGDLKA--EEATIVAANKDTINTKRINFKEEEEEEERKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNH

Query:  MCGDKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRM
        MCGDK AFS+LDE+FRN+V FGDNS VSV+ K                               GQL EKGYE+ IKDG+ RIQD ++ LIAQVNMT NRM
Subjt:  MCGDKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRM

Query:  FPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-------
        FPLYL NTT +CFS KL D  WLWHFRYGHLNF GLKTLQQK+MVTGLP I+ P+++CEE                    KV+E   +   G        
Subjt:  FPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-------

Query:  -------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM
                           F  +KSEAF  F+S+K+ VEKE G  IKI   DRGGEY S+EF  FC+N+GI++QLT AY+PQQNGV ERKNRT+LNM
Subjt:  -------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM

A5ALW9 Uncharacterized protein8.5e-10145.67Show/hide
Query:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVT------------------------------------
        M+I NKM IHG+K EDVTIVEKILR MTP FNFVVCSIEES DI+ LSIDELQSSLL+HE+K                                      
Subjt:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVT------------------------------------

Query:  ---NQHSKEIEDE------EDGDLKA--EEATIVAANKDTINTKRINFKEEEEEEERKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNH
           NQH  + +D       + G+     +  +   +N +     R    + E      ++  ERT+FAEKE+E+S LM CH N+ T  N+WY+DT C+NH
Subjt:  ---NQHSKEIEDE------EDGDLKA--EEATIVAANKDTINTKRINFKEEEEEEERKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNH

Query:  MCGDKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRM
        MCGDK AFS+LDE+FRN+V FGDNS VSV+ K                               GQL EKGYE+ IKDG+ RIQD ++ LIAQVNMT NRM
Subjt:  MCGDKKAFSELDESFRNTVKFGDNSTVSVLEK-------------------------------GQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTANRM

Query:  FPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-------
        FPLYL NTT +CFSVKL D  WLWHFRYGHLNF  LKTLQ K+MVTGLP I+  +++CEE                    KV+E   +   G        
Subjt:  FPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-------

Query:  -------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM
                           F  +KSEAF  F+S+K+ VEKE    IKI   D GGEY S+EF  FC+N+GI++QLT AY+PQQNG  ERKN T+LNM
Subjt:  -------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTLLNM

A5B902 Uncharacterized protein2.4e-10346.12Show/hide
Query:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDGDLKAEEATIVAANKDTINTK---
        M+I NKMRIHG+K EDVTIVEKILR MTP FNFVVCSIEES DI+ LSIDELQSSLL+HE+K   Q      ++E+  LKA     +A   D    +   
Subjt:  MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDGDLKAEEATIVAANKDTINTK---

Query:  --RINFKEEEEEEERKEEN------------------------------------------------GERTHFAEKEDEISFLMVCHVNEATQQNMWYLD
          R N+    + + ++++N                                                 ERT+FAEKE+E+S LM CH N+ T  N+WY+D
Subjt:  --RINFKEEEEEEERKEEN------------------------------------------------GERTHFAEKEDEISFLMVCHVNEATQQNMWYLD

Query:  TGCNNHMCGDKKAFSELDESFRNTVKFGDNSTVSVLEKG-------------------------------QLLEKGYELSIKDGIFRIQDGEMDLIAQVN
        TGC+NHMCGDK AFS+LDE+FR +V FGDNS VSV+ KG                               QL EKGYE+ IKDG+ RIQD ++ LIAQVN
Subjt:  TGCNNHMCGDKKAFSELDESFRNTVKFGDNSTVSVLEKG-------------------------------QLLEKGYELSIKDGIFRIQDGEMDLIAQVN

Query:  MTANRMFPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-
        MT NRMFPLYL NTT +CFS KL D  WLWHFRYGHLNF GLKTLQQK+MVTGLP I  P+++CEE                    KV+E   +   G  
Subjt:  MTANRMFPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEE--------------------KVMESKETIGVGA-

Query:  -------------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTL
                                 F  +KSEAF  F+S+K+ VEKE    IKI   D GGEY S+EF  FC+N+GI++QLT AY+PQQNG   RKNRT+
Subjt:  -------------------------FRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRGGEYISREFETFCKNNGIKRQLT-AYTPQQNGVYERKNRTL

Query:  LNM
        LNM
Subjt:  LNM

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-1024.49Show/hide
Query:  KEEEEEEERKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNHMCGDKKAFSELDESFRNTVKFGDNSTVSVLEKGQLLEK---GYELSIK
        K ++      + N     F  +E+E   L       +  ++ W +DT  ++H    +  F         TVK G+ S   +   G +  K   G  L +K
Subjt:  KEEEEEEERKEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNHMCGDKKAFSELDESFRNTVKFGDNSTVSVLEKGQLLEK---GYELSIK

Query:  DGIFRIQDGEMDLIAQVNMT--------ANRMFPL--------------YLQNTTHSCFSVKLKDV-----FWLWHFRYGHLNFCGLKTLQQKDMVTGLP
        D +  + D  M+LI+ + +         AN+ + L               L  T       +L          LWH R GH++  GL+ L +K +++   
Subjt:  DGIFRIQDGEMDLIAQVNMT--------ANRMFPL--------------YLQNTTHSCFSVKLKDV-----FWLWHFRYGHLNFCGLKTLQQKDMVTGLP

Query:  QIEV-PAEVC--------------EEK----------VMESKETIGVGAFRF------------------DKSEAFIAFRSYKVQVEKEMGSSIKILHID
           V P + C              E K          V    E   +G  ++                   K + F  F+ +   VE+E G  +K L  D
Subjt:  QIEV-PAEVC--------------EEK----------VMESKETIGVGAFRF------------------DKSEAFIAFRSYKVQVEKEMGSSIKILHID

Query:  RGGEYISREFETFCKNNGIKRQLTA-YTPQQNGVYERKNRTLL
         GGEY SREFE +C ++GI+ + T   TPQ NGV ER NRT++
Subjt:  RGGEYISREFETFCKNNGIKRQLTA-YTPQQNGVYERKNRTLL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATCGCCAACAAAATGCGGATCCATGGAGAAAAAATAGAGGACGTCACCATTGTGGAAAAGATTCTTCGACCAATGACACCGAAGTTTAATTTTGTTGTATGTTC
CATAGAAGAGTCCAAAGATATTGAGAATCTTTCAATTGATGAGTTGCAGAGCTCTTTACTGATTCATGAGCAAAAAGTTACCAATCAACACTCAAAAGAGATAGAGGACG
AGGAAGATGGAGATCTAAAGGCAGAGGAAGCAACGATCGTGGCAGCCAACAAAGACACCATCAATACGAAGAGAATCAATTTCAAGGAAGAGGAAGAGGAAGAGGAAAGA
AAAGAGGAGAATGGAGAAAGAACTCACTTTGCAGAGAAAGAAGATGAAATATCGTTTTTAATGGTGTGCCATGTAAATGAAGCAACTCAACAAAACATGTGGTATTTAGA
TACAGGTTGCAACAATCACATGTGTGGAGACAAGAAGGCTTTTTCAGAACTGGACGAGTCATTCCGTAATACTGTCAAATTTGGTGATAACTCCACAGTTTCAGTCTTGG
AAAAAGGACAATTGCTAGAAAAAGGGTATGAGTTATCTATCAAAGATGGAATCTTTAGAATTCAAGATGGAGAGATGGATTTAATTGCTCAAGTGAATATGACAGCAAAC
CGAATGTTCCCACTTTATCTGCAAAACACAACTCATTCTTGCTTCTCAGTGAAATTGAAGGATGTCTTTTGGCTATGGCATTTTCGCTATGGTCACTTGAACTTTTGTGG
ATTGAAAACACTACAGCAGAAAGATATGGTAACCGGGCTTCCTCAAATTGAAGTTCCTGCTGAAGTTTGTGAAGAGAAAGTCATGGAGAGCAAAGAGACCATTGGAGTTG
GTGCATTCAGATTTGACAAATCTGAAGCTTTTATTGCTTTTAGGAGCTATAAAGTGCAAGTTGAGAAAGAAATGGGCAGCTCAATCAAAATTCTTCACATAGATCGTGGT
GGAGAGTATATCTCACGGGAATTTGAAACTTTCTGTAAGAATAATGGAATCAAAAGACAGTTAACAGCCTACACGCCGCAACAAAACGGTGTCTATGAGCGAAAAAATCG
CACTCTTCTCAATATG
mRNA sequenceShow/hide mRNA sequence
ATGTCAATCGCCAACAAAATGCGGATCCATGGAGAAAAAATAGAGGACGTCACCATTGTGGAAAAGATTCTTCGACCAATGACACCGAAGTTTAATTTTGTTGTATGTTC
CATAGAAGAGTCCAAAGATATTGAGAATCTTTCAATTGATGAGTTGCAGAGCTCTTTACTGATTCATGAGCAAAAAGTTACCAATCAACACTCAAAAGAGATAGAGGACG
AGGAAGATGGAGATCTAAAGGCAGAGGAAGCAACGATCGTGGCAGCCAACAAAGACACCATCAATACGAAGAGAATCAATTTCAAGGAAGAGGAAGAGGAAGAGGAAAGA
AAAGAGGAGAATGGAGAAAGAACTCACTTTGCAGAGAAAGAAGATGAAATATCGTTTTTAATGGTGTGCCATGTAAATGAAGCAACTCAACAAAACATGTGGTATTTAGA
TACAGGTTGCAACAATCACATGTGTGGAGACAAGAAGGCTTTTTCAGAACTGGACGAGTCATTCCGTAATACTGTCAAATTTGGTGATAACTCCACAGTTTCAGTCTTGG
AAAAAGGACAATTGCTAGAAAAAGGGTATGAGTTATCTATCAAAGATGGAATCTTTAGAATTCAAGATGGAGAGATGGATTTAATTGCTCAAGTGAATATGACAGCAAAC
CGAATGTTCCCACTTTATCTGCAAAACACAACTCATTCTTGCTTCTCAGTGAAATTGAAGGATGTCTTTTGGCTATGGCATTTTCGCTATGGTCACTTGAACTTTTGTGG
ATTGAAAACACTACAGCAGAAAGATATGGTAACCGGGCTTCCTCAAATTGAAGTTCCTGCTGAAGTTTGTGAAGAGAAAGTCATGGAGAGCAAAGAGACCATTGGAGTTG
GTGCATTCAGATTTGACAAATCTGAAGCTTTTATTGCTTTTAGGAGCTATAAAGTGCAAGTTGAGAAAGAAATGGGCAGCTCAATCAAAATTCTTCACATAGATCGTGGT
GGAGAGTATATCTCACGGGAATTTGAAACTTTCTGTAAGAATAATGGAATCAAAAGACAGTTAACAGCCTACACGCCGCAACAAAACGGTGTCTATGAGCGAAAAAATCG
CACTCTTCTCAATATG
Protein sequenceShow/hide protein sequence
MSIANKMRIHGEKIEDVTIVEKILRPMTPKFNFVVCSIEESKDIENLSIDELQSSLLIHEQKVTNQHSKEIEDEEDGDLKAEEATIVAANKDTINTKRINFKEEEEEEER
KEENGERTHFAEKEDEISFLMVCHVNEATQQNMWYLDTGCNNHMCGDKKAFSELDESFRNTVKFGDNSTVSVLEKGQLLEKGYELSIKDGIFRIQDGEMDLIAQVNMTAN
RMFPLYLQNTTHSCFSVKLKDVFWLWHFRYGHLNFCGLKTLQQKDMVTGLPQIEVPAEVCEEKVMESKETIGVGAFRFDKSEAFIAFRSYKVQVEKEMGSSIKILHIDRG
GEYISREFETFCKNNGIKRQLTAYTPQQNGVYERKNRTLLNM