; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G15180 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G15180
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description6,7-dimethyl-8-ribityllumazine synthase
Genome locationChr6:13330701..13331406
RNA-Seq ExpressionCSPI06G15180
SyntenyCSPI06G15180
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570631.1 hypothetical protein SDJN03_29546, partial [Cucurbita argyrosperma subsp. sororia]8.2e-6886.36Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VLKANPNHVL+KPSSQGVVRRILILSPESELKRG+IYF+IP+TSLPEKKRNA ++LKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP

Query:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED
        S K KNCT      TAD+DSYLSDVVSDKKPSRR+RRG+RV+VWRP LESISED
Subjt:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED

XP_004149378.1 uncharacterized protein LOC101207122 [Cucumis sativus]2.7e-79100Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP

Query:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED
        SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED
Subjt:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED

XP_008463824.1 PREDICTED: uncharacterized protein LOC103501874 [Cucumis melo]1.5e-7496.15Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNA TTLKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP

Query:  SRKVKNCTVAAVPT-TADTDSYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED
        SRKVKNCTVAAVPT  AD+DSYLSDVVSDKKPSRRERR GSRVIVWRPHLESISED
Subjt:  SRKVKNCTVAAVPT-TADTDSYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED

XP_022944509.1 uncharacterized protein LOC111448946 [Cucurbita moschata]4.8e-6886.36Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VLKANPNHVL+KPSSQGVVRRILILSPESELKRG+IYF+IP+TS PEKKRNA ++LKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP

Query:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED
        S K KNCT      TAD+DSYLSDVVSDKKPSRR+RRG+RV+VWRPHLESISED
Subjt:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED

XP_038902054.1 uncharacterized protein LOC120088703 [Benincasa hispida]6.9e-7594.81Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIP+TSLPEKKRNA TTLKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP

Query:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED
        SRKVK+CTVAAV   AD DSYLSDVVSDKKPSRRERRGSRV+VWRPHLESISED
Subjt:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED

TrEMBL top hitse value%identityAlignment
A0A0A0KBY5 Uncharacterized protein1.3e-79100Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP

Query:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED
        SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED
Subjt:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED

A0A1S3CK32 uncharacterized protein LOC1035018747.4e-7596.15Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNA TTLKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP

Query:  SRKVKNCTVAAVPT-TADTDSYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED
        SRKVKNCTVAAVPT  AD+DSYLSDVVSDKKPSRRERR GSRVIVWRPHLESISED
Subjt:  SRKVKNCTVAAVPT-TADTDSYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED

A0A5A7UMR0 6,7-dimethyl-8-ribityllumazine synthase7.4e-7596.15Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNA TTLKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP

Query:  SRKVKNCTVAAVPT-TADTDSYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED
        SRKVKNCTVAAVPT  AD+DSYLSDVVSDKKPSRRERR GSRVIVWRPHLESISED
Subjt:  SRKVKNCTVAAVPT-TADTDSYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED

A0A6J1FWT9 uncharacterized protein LOC1114489462.3e-6886.36Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VLKANPNHVL+KPSSQGVVRRILILSPESELKRG+IYF+IP+TS PEKKRNA ++LKTP
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP

Query:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED
        S K KNCT      TAD+DSYLSDVVSDKKPSRR+RRG+RV+VWRPHLESISED
Subjt:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED

A0A6J1L2H4 uncharacterized protein LOC1114997999.1e-6585.81Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEIAHPITAG+VLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIP+TSLPEKK+N  TT K  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTP

Query:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED
        S+K KN T AAVP   D  SYLSD+VSDKKPSRR+RR GSRV+VWRPHLESISED
Subjt:  SRKVKNCTVAAVPTTADTDSYLSDVVSDKKPSRRERR-GSRVIVWRPHLESISED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06980.1 unknown protein4.2e-4661.08Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATT----
        MGNSLRCCLACVLPCGALDLIRIVHLNG+VEEI   ITAG++L+ANPNHVLSKP SQGVVR+ILILSPESELKRGSIYFLIP +SLPEKKR    T    
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATT----

Query:  --LKTPSRKVKNCTVAAVPTTAD-TDSYLSDVVS------DKKPSRRERRGSRVIVWRPHLESISED
          L+ PS       +          + YL +VVS      + +  RR  R + V  WRP L+SISED
Subjt:  --LKTPSRKVKNCTVAAVPTTAD-TDSYLSDVVS------DKKPSRRERRGSRVIVWRPHLESISED

AT1G29195.1 unknown protein2.6e-3242.55Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSS-------QGVV--RRILILSPESELKRGSIYFLIPST-------
        M  ++RCC+AC+LPCGALD+IRIVH NGHVEEI+  ITA +++KA+P HVL KPSS       + V+   +I+I+ PE+EL+RG IYFL+P+T       
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSS-------QGVV--RRILILSPESELKRGSIYFLIPST-------

Query:  --SLPEKKRNAATTLKTPSRKVK-------NCTVAAVPTTAD----------TDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISE
           +  +K NA   +K  S+  +        C         D          +D YL++++S+K  ++++RR  RV VWRPHLESISE
Subjt:  --SLPEKKRNAATTLKTPSRKVK-------NCTVAAVPTTAD----------TDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISE

AT2G30230.1 unknown protein1.0e-4759.43Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPE----KKRNAATT
        MGNSLRCCLACVLPCGALDLIRIVHLNGHV+EI  P+TAG++L+ANPNHVLSKP SQGVVR+ILILSPESELKRGSIYFLIP TS+PE    KKR     
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPE----KKRNAATT

Query:  LKTPSRKVKNCTVAAVPTTADTD--------SYLSDVVSDKKPS---------RRERRGSRVIVWRPHLESISED
         K P     +     V T  D D         YL DV+  +K S         R+  R + V  WRPHL+SI+ED
Subjt:  LKTPSRKVKNCTVAAVPTTADTD--------SYLSDVVSDKKPS---------RRERRGSRVIVWRPHLESISED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACAGTTTAAGATGCTGTTTAGCTTGTGTTCTTCCTTGTGGAGCTTTAGATTTGATCCGAATCGTCCATTTAAACGGCCACGTCGAAGAAATTGCTCATCCGAT
CACCGCCGGCGACGTCCTAAAAGCCAACCCAAATCACGTTCTTAGTAAGCCTTCTTCACAAGGAGTTGTTCGCCGGATTCTGATCCTCTCCCCCGAATCTGAGCTCAAAA
GGGGAAGTATCTATTTCTTGATTCCCTCCACTTCTCTGCCGGAGAAGAAAAGAAACGCTGCAACCACCCTTAAGACTCCTTCAAGAAAAGTAAAAAATTGCACCGTCGCC
GCCGTGCCCACCACCGCTGACACTGACTCTTACCTCTCCGATGTTGTCTCCGACAAAAAACCGTCGCGGCGAGAACGACGCGGCAGCCGGGTTATCGTATGGCGGCCCCA
TTTAGAGAGCATTTCTGAAGACTAA
mRNA sequenceShow/hide mRNA sequence
TATAAATCCATCGTTGTCCTTCCATTTTCTTCCCCCATTCATAAAATTCAAAACATTTTTTTTTTCCTTCAAACTTCAAAACTTTTCATATTTTCTCCAAATGGGTAACA
GTTTAAGATGCTGTTTAGCTTGTGTTCTTCCTTGTGGAGCTTTAGATTTGATCCGAATCGTCCATTTAAACGGCCACGTCGAAGAAATTGCTCATCCGATCACCGCCGGC
GACGTCCTAAAAGCCAACCCAAATCACGTTCTTAGTAAGCCTTCTTCACAAGGAGTTGTTCGCCGGATTCTGATCCTCTCCCCCGAATCTGAGCTCAAAAGGGGAAGTAT
CTATTTCTTGATTCCCTCCACTTCTCTGCCGGAGAAGAAAAGAAACGCTGCAACCACCCTTAAGACTCCTTCAAGAAAAGTAAAAAATTGCACCGTCGCCGCCGTGCCCA
CCACCGCTGACACTGACTCTTACCTCTCCGATGTTGTCTCCGACAAAAAACCGTCGCGGCGAGAACGACGCGGCAGCCGGGTTATCGTATGGCGGCCCCATTTAGAGAGC
ATTTCTGAAGACTAAACAAATTATACTTAACATATAAAAATTTCATTTTTGCCCACGCCGGAATCTGAATTTCCGGCCGGAAGCGGAGGGGTAATTTGGGTTTTTTCCAC
TTTTTTTACTGGGGGTAAGTTTGATATTAATCATCCAGTTTTTTTT
Protein sequenceShow/hide protein sequence
MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGDVLKANPNHVLSKPSSQGVVRRILILSPESELKRGSIYFLIPSTSLPEKKRNAATTLKTPSRKVKNCTVA
AVPTTADTDSYLSDVVSDKKPSRRERRGSRVIVWRPHLESISED