| GenBank top hits | e value | %identity | Alignment |
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| KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.2e-219 | 66.03 | Show/hide |
Query: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
DKE+D+KFIERLE+WDSKNHQII WL NTSIPAIH QFDAF++ SVNEYLAVLQPIWTQLDQA+I
Subjt: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
Query: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
+KDHLRLIKVLM LRPEYESVRAALLHRSPLPSLDAAIQEILFEE+ LGIN +K D L STY+ S+ FCKNCKL GHKFIN PKIECRYCHK GH
Subjt: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
Query: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
ILDNCP +PP+P ST+ KNFTKP SS D S++ +ISDLQ LLNQ+ISS SSAL VS GNRWLLDS CCNHMTSD+SLM+T SPTKSLPPI
Subjt: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
Query: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
YAADG S + + D G + G++
Subjt: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
Query: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
WHLRLGHAS EKLRHLIS+NNLN++TKFVPFNCLNCKLAKQ ALSFS S S CDKPFDL+HSDIWGPAP +TVHGYRYYVLFIDD+SRFTWIYFLKHRSE
Subjt: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
Query: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
LSRTYIEFANMIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPHTSQQNGRAERKHRHILDS+ ALLLSASCP+KFWGEAALTSVYTINRL
Subjt: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
Query: PSSVLQNTSPFERLYGISPDYSNLKDF
PSSVLQN SPFERLYG P+YSNLK F
Subjt: PSSVLQNTSPFERLYGISPDYSNLKDF
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| TYK15021.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.7e-220 | 66.35 | Show/hide |
Query: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
DKE+D+KFIERLE+WDSKNHQII WL NTSIPAIH QFDAFD+ SVNEYLAVLQPIWTQLDQA+I
Subjt: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
Query: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
+KDHLRLIKVLM LRPEYESVRAALLHRSPLPSLDAAIQEILFEE+ LGIN +K DV L STY+ S+ FCKNCKL GHKFIN PKIECRYCHK GH
Subjt: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
Query: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
ILDNCP +PP+P ST+ KNFTKP SS D+S+ +ISDLQ LLNQ+ISS SSAL VS GNRWLLDS CCNHMTSD+SLM+T SPTKSLPPI
Subjt: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
Query: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
YAADG S + + D G + G++
Subjt: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
Query: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
WHLRLGHAS EKLRHLIS+NNLN++TKFVPFNCLNCKLAKQ ALSFS+S S CDKPFDL+HSDIWGPAP TTVHGYRYYVLFIDD+SRFTWIYFLKHRSE
Subjt: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
Query: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
LSRTYIEFANMIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPHTSQQNGRAERKHRHILDS+ ALLLSASCP+KFWGEAALTSVYTINRL
Subjt: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
Query: PSSVLQNTSPFERLYGISPDYSNLKDF
PSSVLQN SPFE+LYG P+YSNLK F
Subjt: PSSVLQNTSPFERLYGISPDYSNLKDF
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| TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.2e-219 | 66.03 | Show/hide |
Query: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
DKE+D+KFIERLE+WDSKNHQII WL NTSIPAIH QFDAF++ SVNEYLAVLQPIWTQLDQA+I
Subjt: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
Query: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
+KDHLRLIKVLM LRPEYESVRAALLHRSPLPSLDAAIQEILFEE+ LGIN +K D L STY+ S+ FCKNCKL GHKFIN PKIECRYCHK GH
Subjt: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
Query: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
ILDNCP +PP+P ST+ KNFTKP SS D S++ +ISDLQ LLNQ+ISS SSAL VS GNRWLLDS CCNHMTSD+SLM+T SPTKSLPPI
Subjt: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
Query: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
YAADG S + + D G + G++
Subjt: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
Query: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
WHLRLGHAS EKLRHLIS+NNLN++TKFVPFNCLNCKLAKQ ALSFS S S CDKPFDL+HSDIWGPAP +TVHGYRYYVLFIDD+SRFTWIYFLKHRSE
Subjt: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
Query: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
LSRTYIEFANMIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPHTSQQNGRAERKHRHILDS+ ALLLSASCP+KFWGEAALTSVYTINRL
Subjt: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
Query: PSSVLQNTSPFERLYGISPDYSNLKDF
PSSVLQN SPFERLYG P+YSNLK F
Subjt: PSSVLQNTSPFERLYGISPDYSNLKDF
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| TYK26360.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.2e-219 | 66.03 | Show/hide |
Query: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
DKE+D+KFIERLE+WDSKNHQII WL NTSIPAIH QFDAF++ SVNEYLAVLQPIWTQLDQA+I
Subjt: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
Query: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
+KDHLRLIKVLM LRPEYESVRAALLHRSPLPSLDAAIQEILFEE+ LGIN +K D L STY+ S+ FCKNCKL GHKFIN PKIECRYCHK GH
Subjt: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
Query: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
ILDNCP +PP+P ST+ KNFTKP SS D S++ +ISDLQ LLNQ+ISS SSAL VS GNRWLLDS CCNHMTSD+SLM+T SPTKSLPPI
Subjt: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
Query: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
YAADG S + + D G + G++
Subjt: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
Query: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
WHLRLGHAS EKLRHLIS+NNLN++TKFVPFNCLNCKLAKQ ALSFS S S CDKPFDL+HSDIWGPAP +TVHGYRYYVLFIDD+SRFTWIYFLKHRSE
Subjt: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
Query: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
LSRTYIEFANMIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPHTSQQNGRAERKHRHILDS+ ALLLSASCP+KFWGEAALTSVYTINRL
Subjt: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
Query: PSSVLQNTSPFERLYGISPDYSNLKDF
PSSVLQN SPFERLYG P+YSNLK F
Subjt: PSSVLQNTSPFERLYGISPDYSNLKDF
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| XP_031745067.1 uncharacterized protein LOC116405245 [Cucumis sativus] | 1.3e-233 | 68.32 | Show/hide |
Query: PLDKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQA
P KE DN FIERLEDWDSKNHQII WLGNTSIPAIHAQFDAFDD SVNEYLAVLQPIWTQLDQA
Subjt: PLDKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQA
Query: SINKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKH
+I+KDHLRLIKVLM LRPEYESVRAALLHR+PLPSLDAAIQEIL TYT +NMFCKNCKL GHKF N PKIECRYCHKH
Subjt: SINKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKH
Query: GHILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSLIEISDLQILLNQIISSSSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPIY
GHILDNCPTRPP+P GTSTKEK FTK G SSVVAATSDDSSLI+ISDLQ LLNQ+ISSSSAL+ H D T + + ++
Subjt: GHILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSLIEISDLQILLNQIISSSSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPIY
Query: -------AADGSGSADETDDWNGSQSGKIWHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPIT
++ S SA TD WHLRLGHASSEKLRHLISVNNL NLTKFVPFNCLNCKLAKQ ALSFSQSISNCDKPFDLVHSDIWGPAPIT
Subjt: -------AADGSGSADETDDWNGSQSGKIWHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPIT
Query: TVHGYRYYVLFIDDYSRFTWIYFLKHRSELSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDS
TVHGYRYYVLFIDDYSRFTWIYFLKHRSELSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDS
Subjt: TVHGYRYYVLFIDDYSRFTWIYFLKHRSELSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDS
Query: ICALLLSASCPKKFWGEAALTSVYTINRLPSSVLQNTSPFERLYGISPDYSNLKDF---VVGTLFPTDSG----------YLG-----------------
+ ALLLSASCP+KFWGEAALTSVYTINRLPSSVLQNTSPFE+LYGISPDYS LK F L P + +LG
Subjt: ICALLLSASCPKKFWGEAALTSVYTINRLPSSVLQNTSPFERLYGISPDYSNLKDF---VVGTLFPTDSG----------YLG-----------------
Query: ------MSLFGNTLCSLVCPPSTPLSLVLILSLPIHLLTFFLSLNPPWILSLHNLHLLLRIRIHHLSSMMFLNLHLLLLFVALPG
++ + +T+ S + T SLVL LSL IHLLTFFLSLNPPWILSLHNLHLLL+I IH LS MMFLN HLLLLFVALPG
Subjt: ------MSLFGNTLCSLVCPPSTPLSLVLILSLPIHLLTFFLSLNPPWILSLHNLHLLLRIRIHHLSSMMFLNLHLLLLFVALPG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-219 | 66.03 | Show/hide |
Query: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
DKE+D+KFIERLE+WDSKNHQII WL NTSIPAIH QFDAF++ SVNEYLAVLQPIWTQLDQA+I
Subjt: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
Query: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
+KDHLRLIKVLM LRPEYESVRAALLHRSPLPSLDAAIQEILFEE+ LGIN +K D L STY+ S+ FCKNCKL GHKFIN PKIECRYCHK GH
Subjt: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
Query: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
ILDNCP +PP+P ST+ KNFTKP SS D S++ +ISDLQ LLNQ+ISS SSAL VS GNRWLLDS CCNHMTSD+SLM+T SPTKSLPPI
Subjt: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
Query: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
YAADG S + + D G + G++
Subjt: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
Query: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
WHLRLGHAS EKLRHLIS+NNLN++TKFVPFNCLNCKLAKQ ALSFS S S CDKPFDL+HSDIWGPAP +TVHGYRYYVLFIDD+SRFTWIYFLKHRSE
Subjt: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
Query: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
LSRTYIEFANMIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPHTSQQNGRAERKHRHILDS+ ALLLSASCP+KFWGEAALTSVYTINRL
Subjt: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
Query: PSSVLQNTSPFERLYGISPDYSNLKDF
PSSVLQN SPFERLYG P+YSNLK F
Subjt: PSSVLQNTSPFERLYGISPDYSNLKDF
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| A0A5D3C0D7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-219 | 66.03 | Show/hide |
Query: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
DKE+D+KFIERLE+WDSKNHQII WL NTSIPAIH QFDAF++ SVNEYLAVLQPIWTQLDQA+I
Subjt: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
Query: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
+KDHLRLIKVLM LRPEYESVRAALLHRSPLPSLDAAIQEILFEE+ LGIN +K D L STY+ S+ FCKNCKL GHKFIN PKIECRYCHK GH
Subjt: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
Query: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
ILDNCP +PP+P ST+ KNFTKP SS D S++ +ISDLQ LLNQ+ISS SSAL VS GNRWLLDS CCNHMTSD+SLM+T SPTKSLPPI
Subjt: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
Query: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
YAADG S + + D G + G++
Subjt: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
Query: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
WHLRLGHAS EKLRHLIS+NNLN++TKFVPFNCLNCKLAKQ ALSFS S S CDKPFDL+HSDIWGPAP +TVHGYRYYVLFIDD+SRFTWIYFLKHRSE
Subjt: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
Query: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
LSRTYIEFANMIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPHTSQQNGRAERKHRHILDS+ ALLLSASCP+KFWGEAALTSVYTINRL
Subjt: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
Query: PSSVLQNTSPFERLYGISPDYSNLKDF
PSSVLQN SPFERLYG P+YSNLK F
Subjt: PSSVLQNTSPFERLYGISPDYSNLKDF
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| A0A5D3CT53 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.1e-221 | 66.35 | Show/hide |
Query: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
DKE+D+KFIERLE+WDSKNHQII WL NTSIPAIH QFDAFD+ SVNEYLAVLQPIWTQLDQA+I
Subjt: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
Query: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
+KDHLRLIKVLM LRPEYESVRAALLHRSPLPSLDAAIQEILFEE+ LGIN +K DV L STY+ S+ FCKNCKL GHKFIN PKIECRYCHK GH
Subjt: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
Query: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
ILDNCP +PP+P ST+ KNFTKP SS D+S+ +ISDLQ LLNQ+ISS SSAL VS GNRWLLDS CCNHMTSD+SLM+T SPTKSLPPI
Subjt: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
Query: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
YAADG S + + D G + G++
Subjt: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
Query: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
WHLRLGHAS EKLRHLIS+NNLN++TKFVPFNCLNCKLAKQ ALSFS+S S CDKPFDL+HSDIWGPAP TTVHGYRYYVLFIDD+SRFTWIYFLKHRSE
Subjt: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
Query: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
LSRTYIEFANMIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPHTSQQNGRAERKHRHILDS+ ALLLSASCP+KFWGEAALTSVYTINRL
Subjt: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
Query: PSSVLQNTSPFERLYGISPDYSNLKDF
PSSVLQN SPFE+LYG P+YSNLK F
Subjt: PSSVLQNTSPFERLYGISPDYSNLKDF
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| A0A5D3D7V8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-219 | 66.03 | Show/hide |
Query: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
DKE+D+KFIERLE+WDSKNHQII WL NTSIPAIH QFDAF++ SVNEYLAVLQPIWTQLDQA+I
Subjt: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
Query: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
+KDHLRLIKVLM LRPEYESVRAALLHRSPLPSLDAAIQEILFEE+ LGIN +K D L STY+ S+ FCKNCKL GHKFIN PKIECRYCHK GH
Subjt: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
Query: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
ILDNCP +PP+P ST+ KNFTKP SS D S++ +ISDLQ LLNQ+ISS SSAL VS GNRWLLDS CCNHMTSD+SLM+T SPTKSLPPI
Subjt: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
Query: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
YAADG S + + D G + G++
Subjt: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
Query: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
WHLRLGHAS EKLRHLIS+NNLN++TKFVPFNCLNCKLAKQ ALSFS S S CDKPFDL+HSDIWGPAP +TVHGYRYYVLFIDD+SRFTWIYFLKHRSE
Subjt: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
Query: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
LSRTYIEFANMIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPHTSQQNGRAERKHRHILDS+ ALLLSASCP+KFWGEAALTSVYTINRL
Subjt: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
Query: PSSVLQNTSPFERLYGISPDYSNLKDF
PSSVLQN SPFERLYG P+YSNLK F
Subjt: PSSVLQNTSPFERLYGISPDYSNLKDF
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| A0A5D3DT06 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-219 | 66.03 | Show/hide |
Query: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
DKE+D+KFIERLE+WDSKNHQII WL NTSIPAIH QFDAF++ SVNEYLAVLQPIWTQLDQA+I
Subjt: DKEEDNKFIERLEDWDSKNHQIIIWLGNTSIPAIHAQFDAFDD------------------------------------SVNEYLAVLQPIWTQLDQASI
Query: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
+KDHLRLIKVLM LRPEYESVRAALLHRSPLPSLDAAIQEILFEE+ LGIN +K D L STY+ S+ FCKNCKL GHKFIN PKIECRYCHK GH
Subjt: NKDHLRLIKVLMRLRPEYESVRAALLHRSPLPSLDAAIQEILFEEKHLGINSTKQPDVGLGSTYT----SNMFCKNCKLFGHKFINGPKIECRYCHKHGH
Query: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
ILDNCP +PP+P ST+ KNFTKP SS D S++ +ISDLQ LLNQ+ISS SSAL VS GNRWLLDS CCNHMTSD+SLM+T SPTKSLPPI
Subjt: ILDNCPTRPPQPLGTSTKEKNFTKPGPSSVVAATSDDSSL--IEISDLQILLNQIISS-SSALVVSSGNRWLLDSTCCNHMTSDFSLMSTSSPTKSLPPI
Query: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
YAADG S + + D G + G++
Subjt: YAADG----------------------------------------------SGSADETDD-------WNGSQSGKI------------------------
Query: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
WHLRLGHAS EKLRHLIS+NNLN++TKFVPFNCLNCKLAKQ ALSFS S S CDKPFDL+HSDIWGPAP +TVHGYRYYVLFIDD+SRFTWIYFLKHRSE
Subjt: WHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRSE
Query: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
LSRTYIEFANMIRTQFS PIK LRTDNALEYKDS LLSFLSQQGT+VQRSCPHTSQQNGRAERKHRHILDS+ ALLLSASCP+KFWGEAALTSVYTINRL
Subjt: LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINRL
Query: PSSVLQNTSPFERLYGISPDYSNLKDF
PSSVLQN SPFERLYG P+YSNLK F
Subjt: PSSVLQNTSPFERLYGISPDYSNLKDF
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.6e-27 | 31.09 | Show/hide |
Query: KIWHLRLGHASSEKL-----RHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQ--SISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTW
++WH R GH S KL +++ S +L N + C C KQ L F Q ++ +P +VHSD+ GP T+ Y+V+F+D ++ +
Subjt: KIWHLRLGHASSEKL-----RHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQ--SISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTW
Query: IYFLKHRSELSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAAL
Y +K++S++ + +F F+ + L DN EY + + F ++G + PHT Q NG +ER R I + ++ A K FWGEA L
Subjt: IYFLKHRSELSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAAL
Query: TSVYTINRLPSSVLQNTS--PFERLYGISPDYSNLKDF
T+ Y INR+PS L ++S P+E + P +L+ F
Subjt: TSVYTINRLPSSVLQNTS--PFERLYGISPDYSNLKDF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.2e-31 | 34.65 | Show/hide |
Query: IWHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRS
+WH R+GH S + L+ L + ++ C C KQ +SF S DLV+SD+ GP I ++ G +Y+V FIDD SR W+Y LK +
Subjt: IWHLRLGHASSEKLRHLISVNNLNNLTKFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRS
Query: ELSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINR
++ + + +F ++ + +K LR+DN EY + S G +++ P T Q NG AER +R I++ + ++L A PK FWGEA T+ Y INR
Subjt: ELSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINR
Query: LPSSVLQNTSPFERLYGISPDYSNLKDF
PS L P YS+LK F
Subjt: LPSSVLQNTSPFERLYGISPDYSNLKDF
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| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 3.7e-13 | 25.23 | Show/hide |
Query: HLRLGHASSEKLRHLISVNNLN-------NLTKFVPFNCLNC---KLAKQLALSFSQ-SISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFT
H L HA+++ +R+ + N + + + + + C +C K K + S+ N +PF +H+DI+GP Y++ F D+ ++F
Subjt: HLRLGHASSEKLRHLISVNNLN-------NLTKFVPFNCLNC---KLAKQLALSFSQ-SISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFT
Query: WIYFLKHRSE--LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGE
W+Y L R E + + I+ QF + + +++ D EY + L FL + G + S+ +G AER +R +LD L + P W
Subjt: WIYFLKHRSE--LSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGE
Query: AALTSVYTINRLPS
A S N L S
Subjt: AALTSVYTINRLPS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.1e-44 | 40.79 | Show/hide |
Query: WHLRLGHASSEKLRHLISVNNLNNLTKFVPF-NCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRS
WH RLGH + L +IS +L+ L F +C +C + K + FSQS N +P + ++SD+W +PI + YRYYV+F+D ++R+TW+Y LK +S
Subjt: WHLRLGHASSEKLRHLISVNNLNNLTKFVPF-NCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRS
Query: ELSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINR
++ T+I F N++ +F + I +DN E+ L + SQ G S PHT + NG +ERKHRHI+++ LL AS PK +W A +VY INR
Subjt: ELSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINR
Query: LPSSVLQNTSPFERLYGISPDYSNLKDF
LP+ +LQ SPF++L+G SP+Y L+ F
Subjt: LPSSVLQNTSPFERLYGISPDYSNLKDF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.7e-43 | 40.79 | Show/hide |
Query: WHLRLGHASSEKLRHLISVNNLNNLT-KFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRS
WH RLGH S L +IS ++L L +C +C + K + FS S KP + ++SD+W +PI ++ YRYYV+F+D ++R+TW+Y LK +S
Subjt: WHLRLGHASSEKLRHLISVNNLNNLT-KFVPFNCLNCKLAKQLALSFSQSISNCDKPFDLVHSDIWGPAPITTVHGYRYYVLFIDDYSRFTWIYFLKHRS
Query: ELSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINR
++ T+I F +++ +F + I L +DN E+ +L +LSQ G S PHT + NG +ERKHRHI++ LL AS PK +W A +VY INR
Subjt: ELSRTYIEFANMIRTQFSSPIKILRTDNALEYKDSILLSFLSQQGTIVQRSCPHTSQQNGRAERKHRHILDSICALLLSASCPKKFWGEAALTSVYTINR
Query: LPSSVLQNTSPFERLYGISPDYSNLKDF
LP+ +LQ SPF++L+G P+Y LK F
Subjt: LPSSVLQNTSPFERLYGISPDYSNLKDF
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