| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037745.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.4e-177 | 68.5 | Show/hide |
Query: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
M++ELQALE+ HTWDYVDLPP GYSQEYGIDYEETFA VARMTSV SLLA
Subjt: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
Query: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
GTS PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS H+ ALFTR T GIVLLL YVDDMIITGNDPHAISDLQ YLGQH
Subjt: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
Query: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
FEMKDLGSLNYFLGLEVS R DGYLLSQ KYASDL+ARSG+TDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYL VTRPDI Y VHI
Subjt: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
Query: ------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWL
SSLVLSGY DA+WAGDPTDRRST GYCFYLGDSLISWRSKKQSV+SRSSTESEY ALADAT EL+W WL
Subjt: ------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWL
Query: LVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
L DMGVPQQG TLLHCDNRSAIQIAHNDVFHERTKH EN CHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF Q+ TKL L ATLPP
Subjt: LVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
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| KAA0041601.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.4e-177 | 68.5 | Show/hide |
Query: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
M++ELQALE+ HTWDYVDLPP GYSQEYGIDYEETFA VARMTSV SLLA
Subjt: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
Query: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
GTS PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS H+ ALFTR T GIVLLL YVDDMIITGNDPHAISDLQ YLGQH
Subjt: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
Query: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
FEMKDLGSLNYFLGLEVS R DGYLLSQ KYASDL+ARSG+TDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYL VTRPDI Y VHI
Subjt: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
Query: ------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWL
SSLVLSGY DA+WAGDPTDRRST GYCFYLGDSLISWRSKKQSV+SRSSTESEY ALADAT EL+W WL
Subjt: ------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWL
Query: LVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
L DMGVPQQG TLLHCDNRSAIQIAHNDVFHERTKH EN CHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF Q+ TKL L ATLPP
Subjt: LVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
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| KAA0057254.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 6.5e-178 | 71.31 | Show/hide |
Query: MDEELQALERTHTWDYVDLPPG------YSQEYGIDYEETFAHVARMTSVCSLLA---------------------------------GTSPPPNKVCLL
M++ELQALE+ HTWDYVDLPPG YSQEYGIDYEETFA VARMTSV SLLA GTS PP+KVCLL
Subjt: MDEELQALERTHTWDYVDLPPG------YSQEYGIDYEETFAHVARMTSVCSLLA---------------------------------GTSPPPNKVCLL
Query: RRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRLDGYL
RRALYGLKQAPRAWFATFSSTITQLGFTSS H+ LFTR T GIVLLL YVDDMIITGNDP AISDLQ YLGQHFEMKDLGSLNYFLGLEVS R DGYL
Subjt: RRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRLDGYL
Query: LSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI-------------------------------
LSQ KYASDL+ARSG+TDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYL VTRPDI Y VHI
Subjt: LSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI-------------------------------
Query: -----SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQIA
SSLVLSGY DA+WAGDPTD+RST GYCFYLGDSLISWRSKKQSV+SRSSTESEY ALADAT EL+W WLL DMGVPQQG TLLHCDNRSAIQIA
Subjt: -----SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQIA
Query: HNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
HNDVFHERTKH EN CHF+RHHLLS+TLLL+S+ST EQPADIFTKALP RF Q+ TKL L ATLPP
Subjt: HNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
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| TYK19656.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.4e-180 | 72.01 | Show/hide |
Query: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
M++ELQALE+ HTWDYVDLPP GYSQEYGIDYEETFA VARMTSV SLLA
Subjt: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
Query: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
GTS PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS H+ ALFTR T GIVLLL YVDDMIITGNDPHAISDLQ YLGQH
Subjt: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
Query: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
FEMKDLGSLNYFLGLEVS R DGYLLSQ KYASDL+ARSG+TDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYL VTRPDI Y VHI
Subjt: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
Query: ------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQI
SSLVLSGY DA+WAGDPTDRRST GYCFYLGDSLISWRSKKQSV+SRSSTESEY ALADAT EL+W WLL DMGVPQQG TLLHCDNRSAIQI
Subjt: ------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQI
Query: AHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
AHNDVFHERTKH EN CHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF Q+ TKL L ATLPP
Subjt: AHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
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| TYK26360.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.5e-179 | 71.58 | Show/hide |
Query: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
M++ELQALE+ HTWDYVDLPP GYSQEYGIDYEETFA VARMTSV SLLA
Subjt: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
Query: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
GTS PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS H+ ALFTR T GIVLLL YVDDMIITGNDPHAISDLQ YLGQH
Subjt: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
Query: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
FEMKDLGS NYFLGLEVS R DGYLLSQ KYASDL+ARSG+TDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYL VTRPDI Y VHI
Subjt: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
Query: ------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQI
SSLVLSGY DA+WAGDPTDRRST GYCFYLGDSLISWRSKKQSV+SRSSTESEY ALADAT EL+W WLL DMGVPQQG TLLHCDNRSAIQI
Subjt: ------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQI
Query: AHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
AHNDVFHERTKH EN CHF+RHHLLS+TLLL+S+ST +QPADIFTKALPS RF Q+ TKL L ATLPP
Subjt: AHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T8F2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.0e-178 | 68.5 | Show/hide |
Query: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
M++ELQALE+ HTWDYVDLPP GYSQEYGIDYEETFA VARMTSV SLLA
Subjt: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
Query: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
GTS PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS H+ ALFTR T GIVLLL YVDDMIITGNDPHAISDLQ YLGQH
Subjt: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
Query: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
FEMKDLGSLNYFLGLEVS R DGYLLSQ KYASDL+ARSG+TDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYL VTRPDI Y VHI
Subjt: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
Query: ------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWL
SSLVLSGY DA+WAGDPTDRRST GYCFYLGDSLISWRSKKQSV+SRSSTESEY ALADAT EL+W WL
Subjt: ------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWL
Query: LVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
L DMGVPQQG TLLHCDNRSAIQIAHNDVFHERTKH EN CHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF Q+ TKL L ATLPP
Subjt: LVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
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| A0A5A7UPX9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.1e-178 | 71.31 | Show/hide |
Query: MDEELQALERTHTWDYVDLPPG------YSQEYGIDYEETFAHVARMTSVCSLLA---------------------------------GTSPPPNKVCLL
M++ELQALE+ HTWDYVDLPPG YSQEYGIDYEETFA VARMTSV SLLA GTS PP+KVCLL
Subjt: MDEELQALERTHTWDYVDLPPG------YSQEYGIDYEETFAHVARMTSVCSLLA---------------------------------GTSPPPNKVCLL
Query: RRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRLDGYL
RRALYGLKQAPRAWFATFSSTITQLGFTSS H+ LFTR T GIVLLL YVDDMIITGNDP AISDLQ YLGQHFEMKDLGSLNYFLGLEVS R DGYL
Subjt: RRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRLDGYL
Query: LSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI-------------------------------
LSQ KYASDL+ARSG+TDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYL VTRPDI Y VHI
Subjt: LSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI-------------------------------
Query: -----SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQIA
SSLVLSGY DA+WAGDPTD+RST GYCFYLGDSLISWRSKKQSV+SRSSTESEY ALADAT EL+W WLL DMGVPQQG TLLHCDNRSAIQIA
Subjt: -----SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQIA
Query: HNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
HNDVFHERTKH EN CHF+RHHLLS+TLLL+S+ST EQPADIFTKALP RF Q+ TKL L ATLPP
Subjt: HNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
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| A0A5A7VIT8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.0e-178 | 68.5 | Show/hide |
Query: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
M++ELQALE+ HTWDYVDLPP GYSQEYGIDYEETFA VARMTSV SLLA
Subjt: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
Query: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
GTS PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS H+ ALFTR T GIVLLL YVDDMIITGNDPHAISDLQ YLGQH
Subjt: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
Query: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
FEMKDLGSLNYFLGLEVS R DGYLLSQ KYASDL+ARSG+TDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYL VTRPDI Y VHI
Subjt: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
Query: ------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWL
SSLVLSGY DA+WAGDPTDRRST GYCFYLGDSLISWRSKKQSV+SRSSTESEY ALADAT EL+W WL
Subjt: ------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWL
Query: LVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
L DMGVPQQG TLLHCDNRSAIQIAHNDVFHERTKH EN CHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF Q+ TKL L ATLPP
Subjt: LVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
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| A0A5D3D7V8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-180 | 72.01 | Show/hide |
Query: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
M++ELQALE+ HTWDYVDLPP GYSQEYGIDYEETFA VARMTSV SLLA
Subjt: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
Query: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
GTS PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS H+ ALFTR T GIVLLL YVDDMIITGNDPHAISDLQ YLGQH
Subjt: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
Query: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
FEMKDLGSLNYFLGLEVS R DGYLLSQ KYASDL+ARSG+TDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYL VTRPDI Y VHI
Subjt: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
Query: ------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQI
SSLVLSGY DA+WAGDPTDRRST GYCFYLGDSLISWRSKKQSV+SRSSTESEY ALADAT EL+W WLL DMGVPQQG TLLHCDNRSAIQI
Subjt: ------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQI
Query: AHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
AHNDVFHERTKH EN CHF+RHHLLS+TLLL+S+ST EQPADIFTKALPS RF Q+ TKL L ATLPP
Subjt: AHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
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| A0A5D3DT06 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.4e-180 | 71.58 | Show/hide |
Query: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
M++ELQALE+ HTWDYVDLPP GYSQEYGIDYEETFA VARMTSV SLLA
Subjt: MDEELQALERTHTWDYVDLPP-------------------------------GYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
Query: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
GTS PP+KVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSS H+ ALFTR T GIVLLL YVDDMIITGNDPHAISDLQ YLGQH
Subjt: -------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQH
Query: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
FEMKDLGS NYFLGLEVS R DGYLLSQ KYASDL+ARSG+TDS T+STPLDP+VHLTP+DGVPL++ SLYRQLVGSLIYL VTRPDI Y VHI
Subjt: FEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVVHI------
Query: ------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQI
SSLVLSGY DA+WAGDPTDRRST GYCFYLGDSLISWRSKKQSV+SRSSTESEY ALADAT EL+W WLL DMGVPQQG TLLHCDNRSAIQI
Subjt: ------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQI
Query: AHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
AHNDVFHERTKH EN CHF+RHHLLS+TLLL+S+ST +QPADIFTKALPS RF Q+ TKL L ATLPP
Subjt: AHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.6e-54 | 31.07 | Show/hide |
Query: GYSQEYGIDYEETFAHVARMTSVCSLLA---------------------------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGF
G++Q+Y IDYEETFA VAR++S +L+ G S + VC L +A+YGLKQA R WF F + + F
Subjt: GYSQEYGIDYEETFAHVARMTSVCSLLA---------------------------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTITQLGF
Query: TSSSHENALF--TRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTP
+SS + ++ + + + +L YVDD++I D +++ ++YL + F M DL + +F+G+ + + D LSQ+ Y ++++ M + STP
Subjt: TSSSHENALF--TRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTP
Query: LDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIV-TRPDIGYVVHISSLVLS--------------------------------------GYYDANWAGDP
L ++ + D + R L+G L+Y+++ TRPD+ V+I S S GY D++WAG
Subjt: LDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIV-TRPDIGYVVHISSLVLS--------------------------------------GYYDANWAGDP
Query: TDRRSTIGYCFYLGD-SLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRH
DR+ST GY F + D +LI W +K+Q+ ++ SSTE+EY AL +A E +W +LL + + + ++ DN+ I IA+N H+R KH + HF R
Subjt: TDRRSTIGYCFYLGD-SLISWRSKKQSVISRSSTESEYCALADATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRH
Query: HLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLI
+ +N + L + T Q ADIFTK LP+ RF +L KL L+
Subjt: HLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-51 | 29.92 | Show/hide |
Query: MDEELQALERTHTWDYVDLP-------------------------------PGYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
M EE+++L++ T+ V+LP G+ Q+ GID++E F+ V +MTS+ ++L+
Subjt: MDEELQALERTHTWDYVDLP-------------------------------PGYSQEYGIDYEETFAHVARMTSVCSLLA--------------------
Query: ---------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTI-TQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYL
+ + VC L ++LYGLKQAPR W+ F S + +Q + S F R + + ++LL YVDDM+I G D I+ L+ L
Subjt: ---------------GTSPPPNKVCLLRRALYGLKQAPRAWFATFSSTI-TQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYL
Query: GQHFEMKDLGSLNYFLGLE-VSHRLDGYL-LSQTKYASDLIARSGMTDSTTSSTPLDPHVHL------TPFDGVPLDDASLYRQLVGSLIY-LIVTRPDI
+ F+MKDLG LG++ V R L LSQ KY ++ R M ++ STPL H+ L T + Y VGSL+Y ++ TRPDI
Subjt: GQHFEMKDLGSLNYFLGLE-VSHRLDGYL-LSQTKYASDLIARSGMTDSTTSSTPLDPHVHL------TPFDGVPLDDASLYRQLVGSLIY-LIVTRPDI
Query: GYVVHI-----------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALAD
+ V + S +L GY DA+ AGD +R+S+ GY F ISW+SK Q ++ S+TE+EY A +
Subjt: GYVVHI-----------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALAD
Query: ATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRF
E+IW L ++G+ Q+ +++CD++SAI ++ N ++H RTKH + H++R + +L + +ST E PAD+ TK +P N+F
Subjt: ATVELIWPWWLLVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRF
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 2.7e-33 | 37.5 | Show/hide |
Query: LLFYVDDMIITGNDPHAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYR
LL YVDD+++TG+ ++ L L F MKDLG ++YFLG+++ G LSQTKYA ++ +GM D STPL ++ + D S +R
Subjt: LLFYVDDMIITGNDPHAISDLQQYLGQHFEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYR
Query: QLVGSLIYLIVTRPDIGYVVHI------------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQ
+VG+L YL +TRPDI Y V+I S L + + D++WAG + RRST G+C +LG ++ISW +K+Q
Subjt: QLVGSLIYLIVTRPDIGYVVHI------------------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQ
Query: SVISRSSTESEYCALADATVELIW
+SRSSTE+EY ALA EL W
Subjt: SVISRSSTESEYCALADATVELIW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.1e-69 | 35.15 | Show/hide |
Query: MDEELQALERTHTWDYVDLPP--------------------------------GYSQEYGIDYEETFAHVARMTSV--------------------CSLL
M E+ A HTWD V PP GY+Q G+DY ETF+ V + TS+ + L
Subjt: MDEELQALERTHTWDYVDLPP--------------------------------GYSQEYGIDYEETFAHVARMTSV--------------------CSLL
Query: AGT--------SPP-------PNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYL
GT PP PN VC LR+ALYGLKQAPRAW+ + + +GF +S + +LF Q IV +L YVDD++ITGNDP + + L
Subjt: AGT--------SPP-------PNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYL
Query: GQHFEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVV-----
Q F +KD L+YFLG+E G LSQ +Y DL+AR+ M + +TP+ P L+ + G L D + YR +VGSL YL TRPDI Y V
Subjt: GQHFEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVV-----
Query: --------HI-----------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWP
H+ ++L L Y DA+WAGD D ST GY YLG ISW SKKQ + RSSTE+EY ++A+ + E+ W
Subjt: --------HI-----------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWP
Query: WWLLVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
LL ++G+ +++CDN A + N VFH R KH HF+R+ + S L + VST +Q AD TK L F +K+ + +PP
Subjt: WWLLVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLPP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.0e-65 | 34.21 | Show/hide |
Query: MDEELQALERTHTWDYVDLPP--------------------------------GYSQEYGIDYEETFAHVARMTSV--------------------CSLL
M E+ A HTWD V PP GY+Q G+DY ETF+ V + TS+ + L
Subjt: MDEELQALERTHTWDYVDLPP--------------------------------GYSQEYGIDYEETFAHVARMTSV--------------------CSLL
Query: AGT--------SPP-------PNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYL
GT PP P+ VC LR+A+YGLKQAPRAW+ + + +GF +S + +LF Q I+ +L YVDD++ITGND + L
Subjt: AGT--------SPP-------PNKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSSHENALFTRQTTHGIVLLLFYVDDMIITGNDPHAISDLQQYL
Query: GQHFEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVV-----
Q F +K+ L+YFLG+E G LSQ +Y DL+AR+ M + +TP+ LT G L D + YR +VGSL YL TRPD+ Y V
Subjt: GQHFEMKDLGSLNYFLGLEVSHRLDGYLLSQTKYASDLIARSGMTDSTTSSTPLDPHVHLTPFDGVPLDDASLYRQLVGSLIYLIVTRPDIGYVV-----
Query: --HI-----------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWP
H+ ++L L Y DA+WAGD D ST GY YLG ISW SKKQ + RSSTE+EY ++A+ + EL W
Subjt: --HI-----------------------------SSLVLSGYYDANWAGDPTDRRSTIGYCFYLGDSLISWRSKKQSVISRSSTESEYCALADATVELIWP
Query: WWLLVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLP
LL ++G+ +++CDN A + N VFH R KH HF+R+ + S L + VST +Q AD TK L F K+ +I P
Subjt: WWLLVDMGVPQQGSTLLHCDNRSAIQIAHNDVFHERTKHNENGCHFVRHHLLSNTLLLRSVSTIEQPADIFTKALPSNRFCQLLTKLMLIATLP
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