| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032712.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.3e-80 | 60.9 | Show/hide |
Query: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
RLT SAHFV GKSTYTAS W QLYMTEIVRLHG TDGQTKRLNQIL +MLRA +LEF GSWDS
Subjt: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
Query: HLHLMEFAYNNNYQATIDMTPFEALY------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVYNV
HLHLMEFAYNN+YQATIDMTPFEALY GDM+FLKV PM GV RF+ K KLSPRFVGPF++ +RI VAYR ALPPSLS V++V
Subjt: HLHLMEFAYNNNYQATIDMTPFEALY------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVYNV
Query: FHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
FHVSM+RKYV +P H+VD+EPLQ++ NL YEEQP++ILA+E+K L N GIAL KVLWRNH+ +EAT
Subjt: FHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
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| KAA0035799.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa] | 4.8e-80 | 62.21 | Show/hide |
Query: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
RLT S HF+ GKSTYTA KW QLYMTEIVRLHG T+GQT+RLN+IL+DMLRACVLEFSGSWDS
Subjt: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
Query: HLHLMEFAYNNNYQATIDMTPFEALY--------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY
HLHLMEFAYNN+YQATI M PF+ALY GDM+FLKV P+KGV FK K KLSPRFVGPFEI ERI VAYRLALPPS S V+
Subjt: HLHLMEFAYNNNYQATIDMTPFEALY--------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY
Query: NVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNH
+VFHVSM+RKYV +P H+V+YEPLQINENL YEEQPVEILA+E+K+L N GIAL KVLWRNH
Subjt: NVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNH
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| KAA0053631.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.1e-79 | 58.27 | Show/hide |
Query: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
RLT SAHFV GKSTYTASKW QLYM+EIVRLHG TDGQT+RLNQ+L+DMLRAC LEF GSWDS
Subjt: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
Query: HLHLMEFAYNNNYQATIDMTPFEALY------------------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRL
HLHLMEFAYNN+YQATI M PFEALY GD +FLKV PM+GV RF+ + KLSPRFVGPFEI ERI VAYRL
Subjt: HLHLMEFAYNNNYQATIDMTPFEALY------------------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRL
Query: ALPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
ALPPSLS V+ VFHVSM+RKYV +P H+VDYEPL+I+ENL Y EQPVE+LA+E+K L N I L KVLWRNH+ +EAT
Subjt: ALPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
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| KAA0054231.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 8.2e-80 | 58.01 | Show/hide |
Query: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
RLT SAHFV GKS YTASKW QLYM+EIVRLHG TDGQT+RLNQ+L+DMLRAC LEF GSWDS
Subjt: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
Query: HLHLMEFAYNNNYQATIDMTPFEALY---------------------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVA
HLHLMEFAYNN+YQATI MTPFEALY GD +FLKV PMKGV RF+ + KLSPRFVGPFEI ERI VA
Subjt: HLHLMEFAYNNNYQATIDMTPFEALY---------------------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVA
Query: YRLALPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
YRLALPPSLS V++VFHVSM+RKYV +P H+VDYEPL+I+ENL Y EQPVE+LA+E+K+L N I L KVLWRNH+ +EAT
Subjt: YRLALPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
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| KAA0066907.1 pol protein [Cucumis melo var. makuwa] | 1.9e-81 | 60.29 | Show/hide |
Query: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
RLT SAHFV GKSTYTASKW QLYMTEIVRLHG TDGQT+RLNQIL+DMLRACVLEFSGSWDS
Subjt: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
Query: HLHLMEFAYNNNYQATIDMTPFEALY-----------------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLA
HLHLMEFAYNNNYQATI M PFEALY GDM+FLKV PMKGV R+ K KLSPRFVGPFEI ERI VAYRLA
Subjt: HLHLMEFAYNNNYQATIDMTPFEALY-----------------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLA
Query: LPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
LPPS S V++VFHVSM+R+YVA+P H+VD+EPLQI+ENL YEEQPVE+LA+E+K L + I+L KVLWRNH ++AT
Subjt: LPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T334 Retrotransposon protein, putative, Ty3-gypsy subclass | 2.3e-80 | 62.21 | Show/hide |
Query: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
RLT S HF+ GKSTYTA KW QLYMTEIVRLHG T+GQT+RLN+IL+DMLRACVLEFSGSWDS
Subjt: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
Query: HLHLMEFAYNNNYQATIDMTPFEALY--------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY
HLHLMEFAYNN+YQATI M PF+ALY GDM+FLKV P+KGV FK K KLSPRFVGPFEI ERI VAYRLALPPS S V+
Subjt: HLHLMEFAYNNNYQATIDMTPFEALY--------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY
Query: NVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNH
+VFHVSM+RKYV +P H+V+YEPLQINENL YEEQPVEILA+E+K+L N GIAL KVLWRNH
Subjt: NVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNH
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| A0A5A7UL17 Reverse transcriptase | 4.0e-80 | 58.01 | Show/hide |
Query: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
RLT SAHFV GKS YTASKW QLYM+EIVRLHG TDGQT+RLNQ+L+DMLRAC LEF GSWDS
Subjt: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
Query: HLHLMEFAYNNNYQATIDMTPFEALY---------------------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVA
HLHLMEFAYNN+YQATI MTPFEALY GD +FLKV PMKGV RF+ + KLSPRFVGPFEI ERI VA
Subjt: HLHLMEFAYNNNYQATIDMTPFEALY---------------------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVA
Query: YRLALPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
YRLALPPSLS V++VFHVSM+RKYV +P H+VDYEPL+I+ENL Y EQPVE+LA+E+K+L N I L KVLWRNH+ +EAT
Subjt: YRLALPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
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| A0A5A7VID9 Pol protein | 9.4e-82 | 60.29 | Show/hide |
Query: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
RLT SAHFV GKSTYTASKW QLYMTEIVRLHG TDGQT+RLNQIL+DMLRACVLEFSGSWDS
Subjt: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
Query: HLHLMEFAYNNNYQATIDMTPFEALY-----------------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLA
HLHLMEFAYNNNYQATI M PFEALY GDM+FLKV PMKGV R+ K KLSPRFVGPFEI ERI VAYRLA
Subjt: HLHLMEFAYNNNYQATIDMTPFEALY-----------------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLA
Query: LPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
LPPS S V++VFHVSM+R+YVA+P H+VD+EPLQI+ENL YEEQPVE+LA+E+K L + I+L KVLWRNH ++AT
Subjt: LPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
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| A0A5D3BI65 Ty3-gypsy retrotransposon protein | 3.0e-80 | 60.9 | Show/hide |
Query: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
RLT SAHFV GKSTYTAS W QLYMTEIVRLHG TDGQTKRLNQIL +MLRA +LEF GSWDS
Subjt: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
Query: HLHLMEFAYNNNYQATIDMTPFEALY------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVYNV
HLHLMEFAYNN+YQATIDMTPFEALY GDM+FLKV PM GV RF+ K KLSPRFVGPF++ +RI VAYR ALPPSLS V++V
Subjt: HLHLMEFAYNNNYQATIDMTPFEALY------------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVYNV
Query: FHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
FHVSM+RKYV +P H+VD+EPLQ++ NL YEEQP++ILA+E+K L N GIAL KVLWRNH+ +EAT
Subjt: FHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWRNHKAQEAT
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| A0A5D3C8N0 Pol protein | 1.5e-79 | 54.87 | Show/hide |
Query: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
RLT SAHFV GKSTYTASKW QLYMTEIVRLHG TDGQT+RLNQ+L+DMLRACVLEFSGSWDS
Subjt: RLTMSAHFVRGKSTYTASKWTQLYMTEIVRLHG--------------------------------------TDGQTKRLNQILDDMLRACVLEFSGSWDS
Query: HLHLMEFAYNNNYQATIDMTPFEALY------------------------------------------------------------GDMIFLKVTPMKGV
HLHLMEFAYNN+YQATIDMTPFEALY GDM+FLKV PMKGV
Subjt: HLHLMEFAYNNNYQATIDMTPFEALY------------------------------------------------------------GDMIFLKVTPMKGV
Query: SRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWR
RF+ K KLSPRFVG FEI ERI VAYRLALPPS S VY+VFHVSM+R+YVA+P H+VD+EPLQ +ENL YEEQPVEIL +E+K L N I+L KVLWR
Subjt: SRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVYNVFHVSMIRKYVANPIHIVDYEPLQINENLRYEEQPVEILAKEIKLLCNMGIALFKVLWR
Query: NHKAQEAT
NH +EAT
Subjt: NHKAQEAT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 3.9e-08 | 24.04 | Show/hide |
Query: TDGQTKRLNQILDDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIDMTPFEALY---------------------------------------------
TDGQT+R NQ ++ +LR +W H+ L++ +YNN + MTPFE ++
Subjt: TDGQTKRLNQILDDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIDMTPFEALY---------------------------------------------
Query: --------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY-NVFHVSMIRKYVAN
GD++ +K T KL+P F GPF + ++ Y L LP S+ ++ + FHVS + KY N
Subjt: --------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY-NVFHVSMIRKYVAN
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| P0CT35 Transposon Tf2-2 polyprotein | 3.9e-08 | 24.04 | Show/hide |
Query: TDGQTKRLNQILDDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIDMTPFEALY---------------------------------------------
TDGQT+R NQ ++ +LR +W H+ L++ +YNN + MTPFE ++
Subjt: TDGQTKRLNQILDDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIDMTPFEALY---------------------------------------------
Query: --------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY-NVFHVSMIRKYVAN
GD++ +K T KL+P F GPF + ++ Y L LP S+ ++ + FHVS + KY N
Subjt: --------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY-NVFHVSMIRKYVAN
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| P0CT36 Transposon Tf2-3 polyprotein | 3.9e-08 | 24.04 | Show/hide |
Query: TDGQTKRLNQILDDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIDMTPFEALY---------------------------------------------
TDGQT+R NQ ++ +LR +W H+ L++ +YNN + MTPFE ++
Subjt: TDGQTKRLNQILDDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIDMTPFEALY---------------------------------------------
Query: --------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY-NVFHVSMIRKYVAN
GD++ +K T KL+P F GPF + ++ Y L LP S+ ++ + FHVS + KY N
Subjt: --------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY-NVFHVSMIRKYVAN
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| P0CT41 Transposon Tf2-12 polyprotein | 3.9e-08 | 24.04 | Show/hide |
Query: TDGQTKRLNQILDDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIDMTPFEALY---------------------------------------------
TDGQT+R NQ ++ +LR +W H+ L++ +YNN + MTPFE ++
Subjt: TDGQTKRLNQILDDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIDMTPFEALY---------------------------------------------
Query: --------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY-NVFHVSMIRKYVAN
GD++ +K T KL+P F GPF + ++ Y L LP S+ ++ + FHVS + KY N
Subjt: --------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY-NVFHVSMIRKYVAN
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| Q9UR07 Transposon Tf2-11 polyprotein | 3.9e-08 | 24.04 | Show/hide |
Query: TDGQTKRLNQILDDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIDMTPFEALY---------------------------------------------
TDGQT+R NQ ++ +LR +W H+ L++ +YNN + MTPFE ++
Subjt: TDGQTKRLNQILDDMLRACVLEFSGSWDSHLHLMEFAYNNNYQATIDMTPFEALY---------------------------------------------
Query: --------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY-NVFHVSMIRKYVAN
GD++ +K T KL+P F GPF + ++ Y L LP S+ ++ + FHVS + KY N
Subjt: --------------GDMIFLKVTPMKGVSRFKNKEKLSPRFVGPFEIFERIDSVAYRLALPPSLSVVY-NVFHVSMIRKYVAN
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