| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 4.3e-306 | 86.51 | Show/hide |
Query: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
MD +F+DYLIE GIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMS++Q+ DSFWGYALETA +ILNNVPSKSV ETPYELWKGRK SLR+FRIWGCPAH
Subjt: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Query: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPR
VLVQNPKKLE RSKLC F+GYPKESRGGLFY PQENK+FVSTNATFLEEDH R+HQPRSK+VLKE+ K+A DKPSSSTKVVDK S QSH SQ+LR PR
Subjt: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPR
Query: RSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAK
RSGRVVHQP+RYLGL+ETQ++IPDDG+EDPLTYKQAM DVDRDQWIKAM+LEMESMYFNSVWTLVD P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAK
Subjt: RSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAK
Query: GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAIKSY
GYTQ+EGVDYEETFSPVAMLKSIRILLSIATFY+YEIWQMDVKT F+NGNLEESIYM Q +GFI QDQEQKVCKL+KSIYGLKQASRSWN+RFDTAIKSY
Subjt: GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAIKSY
Query: GFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGL
GFEQNVDEPCVYKK+VNS++AFL+LYVDDILLIGNDVEYL D+KKWL QFQMKDLG+AQY+LGIQIVRNRKNKTLAMSQASYIDK+LSRYKMQNSKKG
Subjt: GFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGL
Query: LSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
L + +GIHLSKEQCPKTPQEVEDMRNIPY+S VGSLMYA LCTRPDICYSVG+VSRYQSNPGRDHWT VKNILKYLRRT++YML+Y KD +L
Subjt: LSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 9.3e-285 | 80.87 | Show/hide |
Query: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
MDLRF+DY+IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAH
Subjt: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Query: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
VLV NPKKLE RS+LC F+GYPKE+RGGLF+DPQEN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR
Subjt: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
Query: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
PRRSGRVV QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARL
Subjt: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT F+NGNLEESI+M Q +GFI Q QEQKVCKL +SIYGLKQASRSWN+RFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
Query: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
KSYGF+QNVDEPCVYKK+ +AFLVLYVDDILLIGNDV YL D+K WLA QFQMKDLG+AQYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSK
Subjt: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
Query: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
KGLL + +G+HLSKEQ PKTPQEVEDMR IPYAS VGSLMYA LCTRPDICY+VG+VSRYQSNPG DHWT VK +LKYLRRT+DYML+Y KD +L
Subjt: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-280 | 79.87 | Show/hide |
Query: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
MDL F+DY+IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAH
Subjt: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Query: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
VLV NPKKLE RS+LC F+GYPKE+RGGLF+DP+EN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR
Subjt: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
Query: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
PRRSGRVV QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARL
Subjt: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
VAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKT F+NGNLEESI+M Q +GFI Q QEQKVCKL +SIYGLKQASRSWN+RFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
Query: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
KSYGF+QNVDEPCVYKK+ +AFLVLYVDDILLIGNDV YL D+K WLA QFQMKDLG+ QYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSK
Subjt: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
Query: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
KGLL + +G+HLSKEQ PKTPQEVEDMR IPYAS VGSLMYA LCTRPDICY+VG+VSRYQSNPG DHWT VK ILKYLRRT+DYML+Y KD +L
Subjt: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 9.3e-285 | 80.87 | Show/hide |
Query: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
MDLRF+DY+IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAH
Subjt: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Query: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
VLV NPKKLE RS+LC F+GYPKE+RGGLF+DPQEN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR
Subjt: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
Query: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
PRRSGRVV QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARL
Subjt: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT F+NGNLEESI+M Q +GFI Q QEQKVCKL +SIYGLKQASRSWN+RFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
Query: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
KSYGF+QNVDEPCVYKK+ +AFLVLYVDDILLIGNDV YL D+K WLA QFQMKDLG+AQYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSK
Subjt: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
Query: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
KGLL + +G+HLSKEQ PKTPQEVEDMR IPYAS VGSLMYA LCTRPDICY+VG+VSRYQSNPG DHWT VK +LKYLRRT+DYML+Y KD +L
Subjt: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 9.9e-295 | 84.49 | Show/hide |
Query: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
MDLRF+DYLIE+GIQSQ SAPS PQQNGV +RRNR LLDMVRSMMSF+Q+ DSFW YALET YILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Subjt: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Query: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPR
V VQNPKKLE RSKLC F+GYPKES+GGLFYDPQENK+FVSTNATFLEEDHIR+HQ RSKLVL+EISK+ D+PSS TKVVDKTR GQ+H Q+L +PR
Subjt: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPR
Query: RSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAK
RSGRVV Q DRYLGL E Q++IPDDGIEDPLTYK AM DVDRDQWIKAMDLEMESMY NSVWTLVDQPNDVKPIGCKWIYKRKRD AGKVQTFKARLVAK
Subjt: RSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAK
Query: GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAIKSY
GYTQ+EG+DYEE FS AM+KSIRILLSIATFYDYEIWQMDVKTTF+N NLEESIYM Q + FI++ QEQK+CKL+KSIYGLKQASRS N+RFDTAIKSY
Subjt: GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAIKSY
Query: GFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGL
G EQNVDEPCVYK+++NS +AFLVLYVDDILLIGNDV +L DIKKWLAMQFQMKDLG+AQYVLG+QIVRNRKNKTLAMSQ SYIDKMLSRYKM NSKKGL
Subjt: GFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGL
Query: LSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
L Y YGIHLSKEQCPKTPQEVEDM NIPYAS VGSLMY LCTRP+ICYSVG+VSR QS PGRDHWTTVKNILKYLRRTKDYML+Y +KD +L
Subjt: LSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 6.7e-281 | 79.87 | Show/hide |
Query: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
MDL F+DY+IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAH
Subjt: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Query: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
VLV NPKKLE RS+LC F+GYPKE+RGGLF+DP+EN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR
Subjt: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
Query: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
PRRSGRVV QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARL
Subjt: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
VAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKT F+NGNLEESI+M Q +GFI Q QEQKVCKL +SIYGLKQASRSWN+RFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
Query: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
KSYGF+QNVDEPCVYKK+ +AFLVLYVDDILLIGNDV YL D+K WLA QFQMKDLG+ QYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSK
Subjt: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
Query: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
KGLL + +G+HLSKEQ PKTPQEVEDMR IPYAS VGSLMYA LCTRPDICY+VG+VSRYQSNPG DHWT VK ILKYLRRT+DYML+Y KD +L
Subjt: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
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| A0A5A7TZD0 Gag/pol protein | 4.5e-285 | 80.87 | Show/hide |
Query: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
MDLRF+DY+IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAH
Subjt: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Query: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
VLV NPKKLE RS+LC F+GYPKE+RGGLF+DPQEN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR
Subjt: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
Query: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
PRRSGRVV QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARL
Subjt: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT F+NGNLEESI+M Q +GFI Q QEQKVCKL +SIYGLKQASRSWN+RFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
Query: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
KSYGF+QNVDEPCVYKK+ +AFLVLYVDDILLIGNDV YL D+K WLA QFQMKDLG+AQYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSK
Subjt: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
Query: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
KGLL + +G+HLSKEQ PKTPQEVEDMR IPYAS VGSLMYA LCTRPDICY+VG+VSRYQSNPG DHWT VK +LKYLRRT+DYML+Y KD +L
Subjt: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
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| A0A5A7UYE8 Gag/pol protein | 4.5e-285 | 80.87 | Show/hide |
Query: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
MDLRF+DY+IE+GIQSQLSAP TPQQNGVSERRNRTLLDMVRSMMS++Q+ SFWGYA+ETA +ILNNVPSKSVSETP+ELW+GRK SL HFRIWGCPAH
Subjt: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Query: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
VLV NPKKLE RS+LC F+GYPKE+RGGLF+DPQEN++FVSTNATFLEEDH+R+H+PRSKLVL E S +D+ S++ VD+T SGQSHPSQ LR
Subjt: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI---SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLR
Query: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
PRRSGRVV QP+RYLGL ETQVVIPDDG+EDPL+YKQAM DVD+DQW+KAMDLEMESMYFNSVW LVD P VKPIGCKWIYKRKRD AGKVQTFKARL
Subjt: EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKT F+NGNLEESI+M Q +GFI Q QEQKVCKL +SIYGLKQASRSWN+RFDTAI
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
Query: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
KSYGF+QNVDEPCVYKK+ +AFLVLYVDDILLIGNDV YL D+K WLA QFQMKDLG+AQYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSK
Subjt: KSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSK
Query: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
KGLL + +G+HLSKEQ PKTPQEVEDMR IPYAS VGSLMYA LCTRPDICY+VG+VSRYQSNPG DHWT VK +LKYLRRT+DYML+Y KD +L
Subjt: KGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
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| A0A5D3BX45 Gag/pol protein | 4.8e-295 | 84.49 | Show/hide |
Query: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
MDLRF+DYLIE+GIQSQ SAPS PQQNGV +RRNR LLDMVRSMMSF+Q+ DSFW YALET YILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Subjt: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Query: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPR
V VQNPKKLE RSKLC F+GYPKES+GGLFYDPQENK+FVSTNATFLEEDHIR+HQ RSKLVL+EISK+ D+PSS TKVVDKTR GQ+H Q+L +PR
Subjt: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPR
Query: RSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAK
RSGRVV Q DRYLGL E Q++IPDDGIEDPLTYK AM DVDRDQWIKAMDLEMESMY NSVWTLVDQPNDVKPIGCKWIYKRKRD AGKVQTFKARLVAK
Subjt: RSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAK
Query: GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAIKSY
GYTQ+EG+DYEE FS AM+KSIRILLSIATFYDYEIWQMDVKTTF+N NLEESIYM Q + FI++ QEQK+CKL+KSIYGLKQASRS N+RFDTAIKSY
Subjt: GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAIKSY
Query: GFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGL
G EQNVDEPCVYK+++NS +AFLVLYVDDILLIGNDV +L DIKKWLAMQFQMKDLG+AQYVLG+QIVRNRKNKTLAMSQ SYIDKMLSRYKM NSKKGL
Subjt: GFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGL
Query: LSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
L Y YGIHLSKEQCPKTPQEVEDM NIPYAS VGSLMY LCTRP+ICYSVG+VSR QS PGRDHWTTVKNILKYLRRTKDYML+Y +KD +L
Subjt: LSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
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| E2GK51 Gag/pol protein (Fragment) | 2.1e-306 | 86.51 | Show/hide |
Query: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
MD +F+DYLIE GIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMS++Q+ DSFWGYALETA +ILNNVPSKSV ETPYELWKGRK SLR+FRIWGCPAH
Subjt: MDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAH
Query: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPR
VLVQNPKKLE RSKLC F+GYPKESRGGLFY PQENK+FVSTNATFLEEDH R+HQPRSK+VLKE+ K+A DKPSSSTKVVDK S QSH SQ+LR PR
Subjt: VLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPR
Query: RSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAK
RSGRVVHQP+RYLGL+ETQ++IPDDG+EDPLTYKQAM DVDRDQWIKAM+LEMESMYFNSVWTLVD P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAK
Subjt: RSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAK
Query: GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAIKSY
GYTQ+EGVDYEETFSPVAMLKSIRILLSIATFY+YEIWQMDVKT F+NGNLEESIYM Q +GFI QDQEQKVCKL+KSIYGLKQASRSWN+RFDTAIKSY
Subjt: GYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAIKSY
Query: GFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGL
GFEQNVDEPCVYKK+VNS++AFL+LYVDDILLIGNDVEYL D+KKWL QFQMKDLG+AQY+LGIQIVRNRKNKTLAMSQASYIDK+LSRYKMQNSKKG
Subjt: GFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGL
Query: LSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
L + +GIHLSKEQCPKTPQEVEDMRNIPY+S VGSLMYA LCTRPDICYSVG+VSRYQSNPGRDHWT VKNILKYLRRT++YML+Y KD +L
Subjt: LSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKML
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 6.9e-81 | 29.27 | Show/hide |
Query: RDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSV---SETPYELWKGRKGSLRHFRIWGCPAHVL
R + ++ GI L+ P TPQ NGVSER RT+ + R+M+S +++ SFWG A+ TA Y++N +PS+++ S+TPYE+W +K L+H R++G +V
Subjt: RDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSV---SETPYELWKGRKGSLRHFRIWGCPAHVL
Query: VQNPK-KLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDK--PSSSTKVV------------------
++N + K + +S F+GY E G +D K V+ + E + + + + V + SK + +K P+ S K++
Subjt: VQNPK-KLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDK--PSSSTKVV------------------
Query: DKTRKSGQSHPS--------------------QQLREPRRSGRVV------HQPDRYLG------------LIETQVVIPDDGIEDP-------------
D ++ P+ Q L++ + S + + D +L ET + + GI++P
Subjt: DKTRKSGQSHPS--------------------QQLREPRRSGRVV------HQPDRYLG------------LIETQVVIPDDGIEDP-------------
Query: --------LTYKQ--------------AMKDV-----------DRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
++Y + DV D+ W +A++ E+ + N+ WT+ +P + + +W++ K + G +KARL
Subjt: --------LTYKQ--------------AMKDV-----------DRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARL
Query: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
VA+G+TQ+ +DYEETF+PVA + S R +LS+ Y+ ++ QMDVKT F+NG L+E IYM +G VCKL K+IYGLKQA+R W F+ A+
Subjt: VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAI
Query: KSYGFEQNVDEPCVY---KKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQ
K F + + C+Y K +N I +++LYVDD+++ D+ + + K++L +F+M DL + ++ +GI+I + + +SQ++Y+ K+LS++ M+
Subjt: KSYGFEQNVDEPCVY---KKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQ
Query: NS---KKGLLSYI-YGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYR
N L S I Y + S E C N P S++G LMY LCTRPD+ +V ++SRY S + W +K +L+YL+ T D L+++
Subjt: NS---KKGLLSYI-YGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.7e-122 | 39.39 | Show/hide |
Query: FRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCP--AHV
F +Y +GI+ + + P TPQ NGV+ER NRT+++ VRSM+ +++ SFWG A++TA Y++N PS ++ E P +W ++ S H +++GC AHV
Subjt: FRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCP--AHV
Query: LVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI------SKSAIDKPSSSTKVVDKTRKSGQ------
+ KL+ +S C FIGY E G +DP + K+ S + F E +R S+ V I S + P+S+ D+ + G+
Subjt: LVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI------SKSAIDKPSSSTKVVDKTRKSGQ------
Query: -------------SHPSQ---QLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKP
HP+Q Q + RRS R + RY V+I DD +P + K+ + +++Q +KAM EMES+ N + LV+ P +P
Subjt: -------------SHPSQ---QLREPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKP
Query: IGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVC
+ CKW++K K+D K+ +KARLV KG+ Q++G+D++E FSPV + SIR +LS+A D E+ Q+DVKT F++G+LEE IYM Q +GF ++ VC
Subjt: IGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVC
Query: KLKKSIYGLKQASRSWNMRFDTAIKSYGFEQNVDEPCVY-KKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRK
KL KS+YGLKQA R W M+FD+ +KS + + +PCVY K+ + L+LYVDD+L++G D + +K L+ F MKDLG AQ +LG++IVR R
Subjt: KLKKSIYGLKQASRSWNMRFDTAIKSYGFEQNVDEPCVY-KKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRK
Query: NKTLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNI
++ L +SQ YI+++L R+ M+N+K + LSK+ CP T +E +M +PY+S VGSLMYA +CTRPDI ++VG+VSR+ NPG++HW VK I
Subjt: NKTLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNI
Query: LKYLRRTKDYMLMYRTKDKMLE
L+YLR T L + D +L+
Subjt: LKYLRRTKDYMLMYRTKDKMLE
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| P25600 Putative transposon Ty5-1 protein YCL074W | 6.3e-26 | 30 | Show/hide |
Query: MDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEY
MDV T F+N ++E IY+ Q GF+ + V +L +YGLKQA WN + +K GF ++ E +Y + + ++ +YVDD+L+ +
Subjt: MDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCKLKKSIYGLKQASRSWNMRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEY
Query: LIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYA
+K+ L + MKDLG LG+ I N + +S YI K S ++ K + SK T ++D+ PY SIVG L++
Subjt: LIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYA
Query: KLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKMLESLHHD
RPDI Y V ++SR+ P H + + +L+YL T+ L YR+ ++ +++ D
Subjt: KLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKMLESLHHD
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.5e-67 | 27.25 | Show/hide |
Query: DYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ-
+Y ++GI S P TP+ NG+SER++R +++ +++S + + ++W YA A Y++N +P+ + E+P++ G + R++GC + ++
Subjt: DYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ-
Query: -NPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE-----------DHIRDHQPRSKLVL-----------------------------
N KL+ +S+ C F+GY L Q +++++S + F E +++ + S V
Subjt: -NPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE-----------DHIRDHQPRSKLVL-----------------------------
Query: --------KEISKSAIDKPSSST----------------KVVDKTRKSGQSHPS-----------------QQLREPRRSGR------------------
++S S +D SS+ T+ Q+H S Q L P +S
Subjt: --------KEISKSAIDKPSSST----------------KVVDKTRKSGQSHPS-----------------QQLREPRRSGR------------------
Query: ---VVHQPDRYLGLIETQVVIP----------DDGI----------------EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV-DQPNDVKPI
++H P ++ P GI +P T QA+KD ++W AM E+ + N W LV P+ V +
Subjt: ---VVHQPDRYLGLIETQVVIP----------DDGI----------------EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV-DQPNDVKPI
Query: GCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCK
GC+WI+ +K + G + +KARLVAKGY QR G+DY ETFSPV SIRI+L +A + I Q+DV F+ G L + +YM Q GFI++D+ VCK
Subjt: GCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQEQKVCK
Query: LKKSIYGLKQASRSWNMRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNK
L+K++YGLKQA R+W + + + GF +V + ++ I ++++YVDDIL+ GND L + L+ +F +KD + Y LGI+ R
Subjt: LKKSIYGLKQASRSWNMRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNK
Query: TLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILK
L +SQ YI +L+R M +K LS K E Y IVGSL Y TRPDI Y+V +S++ P +H +K IL+
Subjt: TLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILK
Query: YLRRTKDYMLMYRTKDKMLESLH
YL T ++ + + + + SLH
Subjt: YLRRTKDYMLMYRTKDKMLESLH
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-72 | 28.26 | Show/hide |
Query: RDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ
RDYL ++GI S P TP+ NG+SER++R +++M +++S + + ++W YA A Y++N +P+ + ++P++ G+ + +++GC + ++
Subjt: RDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQ
Query: --NPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE---------------------------------------------DHIRDHQP
N KLE +SK C F+GY L +++ S + F E H+ D P
Subjt: --NPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEE---------------------------------------------DHIRDHQP
Query: R-----SKLVLKEIS-----KSAIDKPSSSTKVV---DKTRKSGQSHPSQQ-------LREPRRSGRVVHQPDRYLGLIETQVVIP--------------
R S L ++S S+I PSSS + + + Q H +Q L P + + P++ L ++ + P
Subjt: R-----SKLVLKEIS-----KSAIDKPSSSTKVV---DKTRKSGQSHPSQQ-------LREPRRSGRVVHQPDRYLGLIETQVVIP--------------
Query: --------------------------------------DDGI----------------EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV-DQP
DGI +P T QAMKD D+W +AM E+ + N W LV P
Subjt: --------------------------------------DDGI----------------EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV-DQP
Query: NDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQ
V +GC+WI+ +K + G + +KARLVAKGY QR G+DY ETFSPV SIRI+L +A + I Q+DV F+ G L + +YM Q GF+++D+
Subjt: NDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQ
Query: EQKVCKLKKSIYGLKQASRSWNMRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIV
VC+L+K+IYGLKQA R+W + T + + GF ++ + ++ I ++++YVDDIL+ GND L L+ +F +K+ D Y LGI+
Subjt: EQKVCKLKKSIYGLKQASRSWNMRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIV
Query: RNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTT
R + L +SQ Y +L+R M +K L+ K P E Y IVGSL Y TRPD+ Y+V +S+Y P DHW
Subjt: RNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEVEDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTT
Query: VKNILKYLRRTKDYMLMYRTKDKMLESLH
+K +L+YL T D+ + + + + SLH
Subjt: VKNILKYLRRTKDYMLMYRTKDKMLESLH
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.2e-57 | 33.6 | Show/hide |
Query: EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL
++P TY +A + + W AMD E+ +M W + P + KPIGCKW+YK K + G ++ +KARLVAKGYTQ+EG+D+ ETFSPV L S++++L
Subjt: EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL
Query: SIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQE----QKVCKLKKSIYGLKQASRSWNMRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFL
+I+ Y++ + Q+D+ F+NG+L+E IYM G+ + + VC LKKSIYGLKQASR W ++F + +GF Q+ + + K+ ++ +
Subjt: SIATFYDYEIWQMDVKTTFMNGNLEESIYMCQTKGFIEQDQE----QKVCKLKKSIYGLKQASRSWNMRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFL
Query: VLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEVED
++YVDDI++ N+ + ++K L F+++DLG +Y LG++I R+ + + Q Y +L + K + + S + + D
Subjt: VLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEVED
Query: MRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKM
+ Y ++G LMY ++ TR DI ++V +S++ P H V IL Y++ T L Y ++ +M
Subjt: MRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKM
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 1.4e-04 | 31.71 | Show/hide |
Query: NRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
NRT+++ VRSM+ + +F A TA +I+N PS +++ P E+W + + R +GC A++ + KL+ R+K
Subjt: NRTLLDMVRSMMSFSQMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSK
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 3.1e-12 | 33.33 | Show/hide |
Query: FLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEV
+L+LYVDDILL G+ L + L+ F MKDLG Y LGIQI + L +SQ Y +++L+ M + K +S + L+ +
Subjt: FLVLYVDDILLIGNDVEYLIDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLSYIYGIHLSKEQCPKTPQEV
Query: EDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKM
D R SIVG+L Y L TRPDI Y+V +V + P + +K +L+Y++ T + L K+
Subjt: EDMRNIPYASIVGSLMYAKLCTRPDICYSVGMVSRYQSNPGRDHWTTVKNILKYLRRTKDYMLMYRTKDKM
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 1.8e-15 | 38.83 | Show/hide |
Query: EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL
++P + A+KD W +AM E++++ N W LV P + +GCKW++K K G + KARLVAKG+ Q EG+ + ET+SPV +IR +L
Subjt: EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL
Query: SIA
++A
Subjt: SIA
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