; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G15670 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G15670
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationChr6:14005797..14007503
RNA-Seq ExpressionCSPI06G15670
SyntenyCSPI06G15670
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004491 - methylmalonate-semialdehyde dehydrogenase (acylating) activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64335.1 hypothetical protein VITISV_001808 [Vitis vinifera]1.1e-22170.66Show/hide
Query:  RYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMDENGNIIRN
        ++ ++HP+D I+GNP  GV+TRSSL N+ +NLAF+SQIEP++ KDA  DE W++AMQ+ELNQFER++VW+LVPRPSN S+I TKWVFRNKMDENG I+RN
Subjt:  RYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMDENGNIIRN

Query:  KARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRL
        KARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+FILYQMDVKSAFLNG+I EE+YVEQPPGF+SF+ PNHV+KLKKALYGLKQAPRAWY+RL
Subjt:  KARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRL

Query:  SKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNE
        SKFLL+  FKMGKID TLFIK K NDML+VQIYVDDI FG+TN SLCE+FSKCMH                               KY +DLLK+F + E
Subjt:  SKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNE

Query:  GKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADF
         KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYLTASRPDIM+SVCLCARFQSCPKESH  AVKRIL+YL GT+ +GLWYP+   F L+G+SDADF
Subjt:  GKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADF

Query:  AGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFI
        AG  ++RKSTSGTC  LG SLVSW SKKQNS+ALST EAEY A + C AQILWMKQTL DF L F++VPI CDNTSAIN++KNP+ HSRTKHI+IRHHF+
Subjt:  AGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFI

Query:  REHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGI
        R+H Q G ITLEFVS+ +QLADIFTKPLSEE F   R +LGI
Subjt:  REHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGI

KYP33754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]6.6e-22469.78Show/hide
Query:  EEGSSSL--PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVF
        +EG +++   +EWR + +HP + I+G+  +GV TR+SL    +N++FVS+IE ++  +A  DE WI AMQEELNQFERN+VW LV RP+N  II TKW+F
Subjt:  EEGSSSL--PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVF

Query:  RNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALY
        RNK+DE+G +IRNKARLVA+GY QEEGIDYEET+APVARLEAIRMLLA+AS  +F LYQMDVKSAFLNG+I EEVYVEQPPGFE+ + PNHV+KLKKALY
Subjt:  RNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALY

Query:  GLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEK
        GLKQAPRAWY+RLSKFLLE +F  GK+D TLFIK K ND+L+VQIYVDDIIFG+TN  LC+EFS  M +EFEMSMMGEL+FFLGLQI+Q K+GIFI+Q K
Subjt:  GLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEK

Query:  YTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRN
        Y ++LLK+F +   K   TPMSTT  LDKDE GK +D+K YRGMIGSLLYL+ASRPDIMFSVC CAR+QS PKESH  AVKRI++YLL T ++GLWYP+N
Subjt:  YTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRN

Query:  VEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHH
        + FNLVGYSD+DFAG   DRKSTSGTC F+GS+LVSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L D+GL  D++PI CDNTSAINL+KNP+ H
Subjt:  VEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHH

Query:  SRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        SRTKHI+IRHHF+R+HVQ G   LEFV + NQLADIFTKPL +E+F   R ELG +
Subjt:  SRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

KYP38726.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]1.1e-22169.3Show/hide
Query:  EKKEEGSSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWV
        EK +E    LPKEW+ +     D I+GN  +GV TRS++ N+ + +AFVSQ+EP+S  +A  DE W++AMQEELNQFERN+VW LVP P +  II TKWV
Subjt:  EKKEEGSSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWV

Query:  FRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKAL
        FRNK+DE+G I+RNKARLVA+GY QEEGIDY+ETFAPVAR+EAIR+LLA++S KNF LYQMDVKSAFLNG I EEVYVEQPPGF  F  PNHVYKLKKAL
Subjt:  FRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKAL

Query:  YGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQE
        YGLKQAPR+WYDRLSKFL+END++ GK+DNTLF+K   ND + VQIYVDDI+FGSTN+SLC+EF+K M  EFEMSMMGEL+FFLGLQIKQ+ DGIFISQ 
Subjt:  YGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQE

Query:  KYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPR
        KY  +LLKKF +   K A TP+S    LD DEKG  VD   YRG+IGSLLYLTASRPDIMF+VCLCARFQ+ PKESH  +VKRILKYL GT +VGLWYP+
Subjt:  KYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPR

Query:  NVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIH
         V  +L+GYSD+D+AG  LDRKSTSGTC  LGS+LVSW SKKQ  VALST EAEYIA  SCCAQILWMKQ L D+G++ + +P+ CDNTSAINLTKNPI 
Subjt:  NVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIH

Query:  HSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        HSRTKHI+IRHHF+R+HVQ     +EFV ++ QLADIFTKPL  E F + R+ELGII
Subjt:  HSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

KYP66812.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]1.3e-22470.14Show/hide
Query:  EEGSSSL--PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVF
        +EG +++   +EWR + +HP + I+G+  +GV TR+SL    +N++FVS+IE ++  +A  DE WI AMQEELNQFERN+VW LV RP+N  II TKW+F
Subjt:  EEGSSSL--PKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVF

Query:  RNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALY
        RNK+DE+G +IRNKARLVA+GY QEEGIDYEET+APVARLEAIRMLLA+AS  +F LYQMDVKSAFLNG+I EEVYVEQPPGFE+ + PNHV+KLKKALY
Subjt:  RNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALY

Query:  GLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEK
        GLKQAPRAWY+RLSKFLLE +F  GK+D TLFIK K ND+L+VQIYVDDIIFG+TN  LC+EFS  M +EFEMSMMGEL+FFLGLQI+Q K+GIFI+Q K
Subjt:  GLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEK

Query:  YTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRN
        Y ++LLK+F +   K   TPMSTT  LDKDE GK +D+K YRGMIGSLLYL+ASRPDIMFSVCLCAR+QS PKESH  AVKRI++ LLGT ++GLWYP+N
Subjt:  YTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRN

Query:  VEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHH
        + FNLVGYSD+DFAG   DRKSTSGTC F+GS+LVSW SKKQNSVALST EAEYIA  SCCAQILWMKQ L D+GL  D++PI CDNTSAINL+KNP+ H
Subjt:  VEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHH

Query:  SRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        SRTKHI+IRHHF+R+HVQ G   LEFV + NQLADIFTKPL +E+F   R ELGI+
Subjt:  SRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

RVW71911.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.5e-24975.77Show/hide
Query:  EGSSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNK
        E S  LPK+W++ ++HP+D I+GNP  GV+TRSSL N+ +NLAF+SQIEP++ KDA  DE W++AMQEELNQFER++VW+LVPRPSN S+I TKWVFRNK
Subjt:  EGSSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNK

Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLK
        MDENG I+RNKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+FILYQMDVKSAFLNG+I EEVYVEQPPGF+SF+ PNHV+KLKKALYGLK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QAPRAWY+RLSKFLL+  FKMGKID TLFIK K  DML+VQIYVDDIIFG+TN SLCE+FSKCMH+EFEMSMMGEL++FLGLQIKQLK+G FI+Q KY +
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEF
        DLLK+F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYLTASRPDIM+SVCLCARFQSCPKESH  AVKRIL+YL GT+++GLWYP+   F
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEF

Query:  NLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRT
         L+G+SDADFAG  ++RKSTSGTC FLG SLVSW SKKQNSVALST EAEYIA   CCAQILWMKQTL DF L F++VPI CDNTSAIN++KNP+ HSRT
Subjt:  NLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRT

Query:  KHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        KHI+IRHHF+R+H Q G ITLEFVS+ +QLADIFTKPLSEE F   R +LG+I
Subjt:  KHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

TrEMBL top hitse value%identityAlignment
A0A2N9E4Z2 Reverse transcriptase Ty1/copia-type domain-containing protein3.5e-23172.15Show/hide
Query:  SSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMD
        +  LPK W    SHPK+LI+G  E+GV TRS L N+ +N+AF+SQIEP++  +A  DE WILAMQEELNQFERNKVW L PRP + S+I TKWVFRNK D
Subjt:  SSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMD

Query:  ENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQA
        E G I+RNKARLVAQGY QEEGIDY ET+APVARLEAIRMLLAFA +KNF L+QMDVKSAFLNG+I EEVYVEQPPGFE+ + PNHV+KL KALYGLKQA
Subjt:  ENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQA

Query:  PRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDL
        PRAWY+RLS FL+E  F  GK+D TLF+     DMLIVQIYVDDIIFGSTN +LC+EFSK M +EFEMSMMGEL FFLGLQIKQ ++GIF++Q KY  DL
Subjt:  PRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDL

Query:  LKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNL
        LK+F L   K   TPMS +TKLDKDEKGK VD+K YRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESH  AVKRI +YLLGTID+GLWYP++  F+L
Subjt:  LKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNL

Query:  VGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKH
        + Y+DADFAG  +DRKSTSGTC FLG SLVSWFSKKQNSVALST EAEY+A  SCCAQ L++KQ L DF + FD++PI CDNTSAI+L+KNPI HSRTKH
Subjt:  VGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKH

Query:  IDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRW
        I+IR+HFIR+HVQ G I LEFVS+++Q ADI TKPL EE FC  R E+G+ R+
Subjt:  IDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRW

A0A2N9FRL0 CCHC-type domain-containing protein1.2e-23172.33Show/hide
Query:  SSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMD
        +  LPK W    SHPK+LI+G  E+GV TRS L N+ +N+AF+SQIEP++  +A  DE WILAMQEELNQFERNKVW L PRP + S+I TKWVFRNK D
Subjt:  SSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMD

Query:  ENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQA
        E G I+RNKARLVAQGY QEEGIDY ET+APVARLEAIRMLLAFA +KNF L+QMDVKSAFLNG+I EEVYVEQPPGFE+ + PNHV+KL KALYGLKQA
Subjt:  ENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQA

Query:  PRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDL
        PRAWY+RLS FL+E  F  GK+D TLF+     DMLIVQIYVDDIIFGSTN +LC+EFSK M +EFEMSMMGEL FFLGLQIKQ +DGIF++Q KY  DL
Subjt:  PRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDL

Query:  LKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNL
        LK+F L   K   TPMS +TKLDKDEKGK VD+K YRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESH  AVKRI +YLLGTID+GLWYP++  F+L
Subjt:  LKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNL

Query:  VGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKH
        + Y+DADFAG  +DRKSTSGTC FLG SLVSWFSKKQNSVALST EAEY+A  SCCAQ L++KQ L DF + FD++PI CDNTSAI+L+KNPI HSRTKH
Subjt:  VGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKH

Query:  IDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRW
        I+IR+HFIR+HVQ G I LEFVS+++Q ADI TKPL EE FC  R E+G+ R+
Subjt:  IDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRW

A0A2N9G065 Reverse transcriptase Ty1/copia-type domain-containing protein7.9e-23172.15Show/hide
Query:  SSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMD
        +  LPK W    SHPK+LI+G  E GV TRS L ++ +N+AF+SQIEP++  +A  DE WILAMQEELNQFERNKVW L PRP + S+I TKWVFRNK D
Subjt:  SSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMD

Query:  ENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQA
        E G I+RNKARLVAQGY QEEGIDY ET+APVARLEAIRMLLAFA +KNF L+QMDVKSAFLNG+I EEVYVEQPPGFE+ + PNHV+KL KALYGLKQA
Subjt:  ENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQA

Query:  PRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDL
        PRAWY+RLS FL+E  F  GK+D TLF+     DMLIVQIYVDDIIFGSTN +LC+EFSK M +EFEMSMMGEL FFLGLQIKQ +DGIF++Q KY  DL
Subjt:  PRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDL

Query:  LKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNL
        LK+F L   K   TPMS +TKLDKDEKGK VD+K YRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESH  AVKRI +YLLGTID+GLWYP++  F+L
Subjt:  LKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNL

Query:  VGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKH
        + Y+DADFAG  +DRKSTSGTC FLG SLVSWFSKKQNSVALST EAEY+A  SCCAQ L++KQ L DF + FD++PI CDNTSAI+L+KNPI HSRTKH
Subjt:  VGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKH

Query:  IDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRW
        I+IR+HFIR+HVQ G I LEFVS+++Q ADI TKPL EE FC  R E+G+ R+
Subjt:  IDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRW

A0A2N9HLC7 CCHC-type domain-containing protein7.9e-23172.15Show/hide
Query:  SSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMD
        +  LPK W    SHPK+LI+G  E GV TRS L ++ +N+AF+SQIEP++  +A  DE WILAMQEELNQFERNKVW L PRP + S+I TKWVFRNK D
Subjt:  SSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMD

Query:  ENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQA
        E G I+RNKARLVAQGY QEEGIDY ET+APVARLEAIRMLLAFA +KNF L+QMDVKSAFLNG+I EEVYVEQPPGFE+ + PNHV+KL KALYGLKQA
Subjt:  ENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQA

Query:  PRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDL
        PRAWY+RLS FL+E  F  GK+D TLF+     DMLIVQIYVDDIIFGSTN +LC+EFSK M +EFEMSMMGEL FFLGLQIKQ +DGIF++Q KY  DL
Subjt:  PRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDL

Query:  LKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNL
        LK+F L   K   TPMS +TKLDKDEKGK VD+K YRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESH  AVKRI +YLLGTID+GLWYP++  F+L
Subjt:  LKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNL

Query:  VGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKH
        + Y+DADFAG  +DRKSTSGTC FLG SLVSWFSKKQNSVALST EAEY+A  SCCAQ L++KQ L DF + FD++PI CDNTSAI+L+KNPI HSRTKH
Subjt:  VGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKH

Query:  IDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRW
        I+IR+HFIR+HVQ G I LEFVS+++Q ADI TKPL EE FC  R E+G+ R+
Subjt:  IDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGIIRW

A0A438GI90 Retrovirus-related Pol polyprotein from transposon TNT 1-942.2e-24975.77Show/hide
Query:  EGSSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNK
        E S  LPK+W++ ++HP+D I+GNP  GV+TRSSL N+ +NLAF+SQIEP++ KDA  DE W++AMQEELNQFER++VW+LVPRPSN S+I TKWVFRNK
Subjt:  EGSSSLPKEWRYALSHPKDLILGNPEQGVKTRSSL-NLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNK

Query:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLK
        MDENG I+RNKARLVAQGY QEEGIDYEETFAPVARLEAIRMLLAFA +K+FILYQMDVKSAFLNG+I EEVYVEQPPGF+SF+ PNHV+KLKKALYGLK
Subjt:  MDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLK

Query:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR
        QAPRAWY+RLSKFLL+  FKMGKID TLFIK K  DML+VQIYVDDIIFG+TN SLCE+FSKCMH+EFEMSMMGEL++FLGLQIKQLK+G FI+Q KY +
Subjt:  QAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTR

Query:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEF
        DLLK+F + E KV KTPMS++ KLD DEKGK +D   YRGMIGSLLYLTASRPDIM+SVCLCARFQSCPKESH  AVKRIL+YL GT+++GLWYP+   F
Subjt:  DLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEF

Query:  NLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRT
         L+G+SDADFAG  ++RKSTSGTC FLG SLVSW SKKQNSVALST EAEYIA   CCAQILWMKQTL DF L F++VPI CDNTSAIN++KNP+ HSRT
Subjt:  NLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRT

Query:  KHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII
        KHI+IRHHF+R+H Q G ITLEFVS+ +QLADIFTKPLSEE F   R +LG+I
Subjt:  KHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKNRLELGII

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.1e-10039.04Show/hide
Query:  PRSFKDAECDE---FWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAF
        P SF + +  +    W  A+  ELN  + N  W +  RP N +I+ ++WVF  K +E GN IR KARLVA+G+ Q+  IDYEETFAPVAR+ + R +L+ 
Subjt:  PRSFKDAECDE---FWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAF

Query:  ASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKN--NDMLIVQIYV
            N  ++QMDVK+AFLNG + EE+Y+  P G       ++V KL KA+YGLKQA R W++   + L E +F    +D  ++I  K   N+ + V +YV
Subjt:  ASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKN--NDMLIVQIYV

Query:  DDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKT-YRGMIG
        DD++  + + +    F + +  +F M+ + E+  F+G++I+  +D I++SQ  Y + +L KF +       TP+   +K++ +      D  T  R +IG
Subjt:  DDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKT-YRGMIG

Query:  SLLY-LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEF--NLVGYSDADFAGSLLDRKSTSG-TCQFLGSSLVSWFSKKQ
         L+Y +  +RPD+  +V + +R+ S      +  +KR+L+YL GTID+ L + +N+ F   ++GY D+D+AGS +DRKST+G   +    +L+ W +K+Q
Subjt:  SLLY-LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEF--NLVGYSDADFAGSLLDRKSTSG-TCQFLGSSLVSWFSKKQ

Query:  NSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDN-VPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPL
        NSVA S+TEAEY+A+     + LW+K  L    +K +N + I+ DN   I++  NP  H R KHIDI++HF RE VQN  I LE++ + NQLADIFTKPL
Subjt:  NSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDN-VPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPL

Query:  SEESFCKNRLELGIIRWDAS
            F + R +LG+++ D S
Subjt:  SEESFCKNRLELGIIRWDAS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.2e-8937.85Show/hide
Query:  AMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFL
        AMQEE+   ++N  +KLV  P     ++ KWVF+ K D +  ++R KARLV +G+ Q++GID++E F+PV ++ +IR +L+ A+  +  + Q+DVK+AFL
Subjt:  AMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFL

Query:  NGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIK-VKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKC
        +G + EE+Y+EQP GFE     + V KL K+LYGLKQAPR WY +   F+    +     D  ++ K    N+ +I+ +YVDD++    +  L  +    
Subjt:  NGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIK-VKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKC

Query:  MHNEFEMSMMGELSFFLGLQI--KQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDK-------DEKGKCVDIKTYRGMIGSLLY-LTASRP
        +   F+M  +G     LG++I  ++    +++SQEKY   +L++F +   K   TP++   KL K       +EKG    +  Y   +GSL+Y +  +RP
Subjt:  MHNEFEMSMMGELSFFLGLQI--KQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDK-------DEKGKCVDIKTYRGMIGSLLY-LTASRP

Query:  DIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIA
        DI  +V + +RF   P + H+ AVK IL+YL GT    L +  +    L GY+DAD AG + +RKS++G         +SW SK Q  VALSTTEAEYIA
Subjt:  DIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTTEAEYIA

Query:  VASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTK--PLSEESFCK
              +++W+K+ L + GL      ++CD+ SAI+L+KN ++H+RTKHID+R+H+IRE V +  + +  +S+N   AD+ TK  P ++   CK
Subjt:  VASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTK--PLSEESFCK

P92519 Uncharacterized mitochondrial protein AtMg008101.6e-3436Show/hide
Query:  IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTY
        +YVDDI+   ++++L       + + F M  +G + +FLG+QIK    G+F+SQ KY   +L     N G +   PMST   L  +      K  D   +
Subjt:  IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTY

Query:  RGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKK
        R ++G+L YLT +RPDI ++V +  +    P  + F  +KR+L+Y+ GTI  GL+  +N + N+  + D+D+AG    R+ST+G C FLG +++SW +K+
Subjt:  RGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKK

Query:  QNSVALSTTEAEYIAVASCCAQILW
        Q +V+ S+TE EY A+A   A++ W
Subjt:  QNSVALSTTEAEYIAVASCCAQILW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.3e-10740.78Show/hide
Query:  LAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLV-PRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAI
        ++  ++ EPR+   A  DE W  AM  E+N    N  W LV P PS+ +I+  +W+F  K + +G++ R KARLVA+GY Q  G+DY ETF+PV +  +I
Subjt:  LAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLV-PRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAI

Query:  RMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIV
        R++L  A  +++ + Q+DV +AFL G + ++VY+ QPPGF   D PN+V KL+KALYGLKQAPRAWY  L  +LL   F     D +LF+  +   ++ +
Subjt:  RMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIV

Query:  QIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRG
         +YVDDI+    + +L       +   F +    EL +FLG++ K++  G+ +SQ +Y  DLL +  +   K   TPM+ + KL      K  D   YRG
Subjt:  QIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRG

Query:  MIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQN
        ++GSL YL  +RPDI ++V   ++F   P E H  A+KRIL+YL GT + G++  +    +L  YSDAD+AG   D  ST+G   +LG   +SW SKKQ 
Subjt:  MIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQN

Query:  SVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVP-IFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLS
         V  S+TEAEY +VA+  +++ W+   L + G++    P I+CDN  A  L  NP+ HSR KHI I +HFIR  VQ+G + +  VS+++QLAD  TKPLS
Subjt:  SVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVP-IFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLS

Query:  EESFCKNRLELGIIR
          +F     ++G+ R
Subjt:  EESFCKNRLELGIIR

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.2e-10639.96Show/hide
Query:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLV-PRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFA
        EPR+   A  D+ W  AM  E+N    N  W LV P P + +I+  +W+F  K + +G++ R KARLVA+GY Q  G+DY ETF+PV +  +IR++L  A
Subjt:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLV-PRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFA

Query:  SYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDI
          +++ + Q+DV +AFL G + +EVY+ QPPGF   D P++V +L+KA+YGLKQAPRAWY  L  +LL   F     D +LF+  +   ++ + +YVDDI
Subjt:  SYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDI

Query:  IFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLY
        +    ++ L +     +   F +    +L +FLG++ K++  G+ +SQ +YT DLL +  +   K   TPM+T+ KL      K  D   YRG++GSL Y
Subjt:  IFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGSLLY

Query:  LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTT
        L  +RPD+ ++V   +++   P + H++A+KR+L+YL GT D G++  +    +L  YSDAD+AG   D  ST+G   +LG   +SW SKKQ  V  S+T
Subjt:  LTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVALSTT

Query:  EAEYIAVASCCAQILWMKQTLCDFGLKFDNVP-IFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKN
        EAEY +VA+  +++ W+   L + G++  + P I+CDN  A  L  NP+ HSR KHI + +HFIR  VQ+G + +  VS+++QLAD  TKPLS  +F   
Subjt:  EAEYIAVASCCAQILWMKQTLCDFGLKFDNVP-IFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSEESFCKN

Query:  RLELGIIR
          ++G+I+
Subjt:  RLELGIIR

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.1e-9539.24Show/hide
Query:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS
        EP ++ +A+    W  AM +E+   E    W++   P N   I  KWV++ K + +G I R KARLVA+GY Q+EGID+ ETF+PV +L +++++LA ++
Subjt:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFAS

Query:  YKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFD----LPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYV
          NF L+Q+D+ +AFLNG + EE+Y++ PPG+ +       PN V  LKK++YGLKQA R W+ + S  L+   F     D+T F+K+     L V +YV
Subjt:  YKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFD----LPNHVYKLKKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYV

Query:  DDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGS
        DDII  S N +  +E    + + F++  +G L +FLGL+I +   GI I Q KY  DLL +  L   K +  PM  +        G  VD K YR +IG 
Subjt:  DDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEKGKCVDIKTYRGMIGS

Query:  LLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVAL
        L+YL  +R DI F+V   ++F   P+ +H  AV +IL Y+ GT+  GL+Y    E  L  +SDA F      R+ST+G C FLG+SL+SW SKKQ  V+ 
Subjt:  LLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKKQNSVAL

Query:  STTEAEYIAVASCCAQILWMKQTLCDFGLKFDN-VPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREH-VQNGHITLEFVSSNNQLADIFTKPLS
        S+ EAEY A++    +++W+ Q   +  L       +FCDNT+AI++  N + H RTKHI+   H +RE  V    ++  F + + Q  D FT+ LS
Subjt:  STTEAEYIAVASCCAQILWMKQTLCDFGLKFDN-VPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREH-VQNGHITLEFVSSNNQLADIFTKPLS

ATMG00810.1 DNA/RNA polymerases superfamily protein1.1e-3536Show/hide
Query:  IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTY
        +YVDDI+   ++++L       + + F M  +G + +FLG+QIK    G+F+SQ KY   +L     N G +   PMST   L  +      K  D   +
Subjt:  IYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTKLDKDEK---GKCVDIKTY

Query:  RGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKK
        R ++G+L YLT +RPDI ++V +  +    P  + F  +KR+L+Y+ GTI  GL+  +N + N+  + D+D+AG    R+ST+G C FLG +++SW +K+
Subjt:  RGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSSLVSWFSKK

Query:  QNSVALSTTEAEYIAVASCCAQILW
        Q +V+ S+TE EY A+A   A++ W
Subjt:  QNSVALSTTEAEYIAVASCCAQILW

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)6.5e-2050.51Show/hide
Query:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFA
        EP+S   A  D  W  AMQEEL+   RNK W LVP P N +I+  KWVF+ K+  +G + R KARLVA+G+ QEEGI + ET++PV R   IR +L  A
Subjt:  EPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGATGTGAACATCATAGAAAAGAAAGAAGAGGGTTCTTCATCCTTGCCTAAAGAGTGGAGATATGCTCTATCCCATCCCAAGGATCTAATTCTTGGCAATCCCGA
ACAAGGTGTCAAAACTCGTTCTTCTCTTAATTTATTTAGTAATCTTGCTTTTGTGTCTCAAATTGAACCTAGAAGTTTTAAAGATGCCGAATGTGATGAGTTTTGGATTT
TAGCTATGCAAGAAGAATTAAATCAATTTGAAAGAAACAAAGTTTGGAAATTAGTCCCTAGGCCTTCTAATGCATCTATAATCAGAACAAAATGGGTTTTTAGAAATAAG
ATGGATGAAAATGGAAATATCATTAGAAATAAAGCTAGACTTGTAGCTCAAGGTTATTGTCAAGAAGAAGGTATAGATTATGAAGAGACTTTTGCACCGGTTGCTAGATT
AGAAGCTATTAGAATGTTGCTTGCTTTTGCTTCTTATAAAAATTTCATTTTGTATCAAATGGATGTAAAAAGTGCTTTTTTAAACGGTTATATTGTAGAGGAAGTTTACG
TAGAACAACCTCCGGGCTTTGAAAGTTTTGATTTACCTAATCATGTTTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGGTATGATAGACTT
AGCAAGTTTTTACTTGAGAATGACTTTAAGATGGGAAAAATTGATAATACTCTATTTATTAAAGTTAAAAATAATGACATGCTTATAGTACAAATTTATGTGGATGATAT
TATATTTGGTTCTACTAATTCATCTTTGTGTGAAGAATTTTCCAAGTGTATGCATAATGAGTTTGAGATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAA
TCAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTGCTCAAGAAATTCAAATTAAATGAAGGTAAAGTTGCAAAAACTCCTATGAGCACT
ACCACTAAGCTTGACAAAGATGAAAAAGGTAAGTGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCTTTACTTTATTTGACCGCTAGTAGACCCGATATCATGTT
TAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCACATTTCCATGCCGTTAAAAGGATACTTAAATATTTGCTTGGAACTATTGATGTTGGATTATGGT
ATCCTAGAAATGTTGAGTTTAATTTGGTAGGATATTCCGATGCGGACTTTGCCGGTAGTTTACTTGACCGTAAAAGTACTAGTGGGACTTGTCAATTTCTTGGTAGTTCC
TTAGTATCTTGGTTTAGTAAAAAGCAAAATTCGGTTGCCTTATCCACTACCGAAGCGGAATATATTGCGGTTGCTAGTTGTTGTGCACAAATTCTTTGGATGAAACAAAC
TCTTTGTGATTTTGGATTAAAATTTGATAATGTGCCTATATTTTGTGATAATACTAGTGCCATAAATTTGACTAAGAATCCTATTCATCATTCTAGAACTAAGCATATAG
ATATTAGGCATCACTTTATTAGAGAGCATGTACAAAATGGTCATATTACTCTTGAGTTTGTAAGCTCCAATAATCAATTAGCGGATATATTTACCAAGCCTTTGAGTGAA
GAAAGCTTTTGTAAAAATAGGCTTGAGCTTGGAATTATTCGTTGGGATGCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGATGTGAACATCATAGAAAAGAAAGAAGAGGGTTCTTCATCCTTGCCTAAAGAGTGGAGATATGCTCTATCCCATCCCAAGGATCTAATTCTTGGCAATCCCGA
ACAAGGTGTCAAAACTCGTTCTTCTCTTAATTTATTTAGTAATCTTGCTTTTGTGTCTCAAATTGAACCTAGAAGTTTTAAAGATGCCGAATGTGATGAGTTTTGGATTT
TAGCTATGCAAGAAGAATTAAATCAATTTGAAAGAAACAAAGTTTGGAAATTAGTCCCTAGGCCTTCTAATGCATCTATAATCAGAACAAAATGGGTTTTTAGAAATAAG
ATGGATGAAAATGGAAATATCATTAGAAATAAAGCTAGACTTGTAGCTCAAGGTTATTGTCAAGAAGAAGGTATAGATTATGAAGAGACTTTTGCACCGGTTGCTAGATT
AGAAGCTATTAGAATGTTGCTTGCTTTTGCTTCTTATAAAAATTTCATTTTGTATCAAATGGATGTAAAAAGTGCTTTTTTAAACGGTTATATTGTAGAGGAAGTTTACG
TAGAACAACCTCCGGGCTTTGAAAGTTTTGATTTACCTAATCATGTTTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGGTATGATAGACTT
AGCAAGTTTTTACTTGAGAATGACTTTAAGATGGGAAAAATTGATAATACTCTATTTATTAAAGTTAAAAATAATGACATGCTTATAGTACAAATTTATGTGGATGATAT
TATATTTGGTTCTACTAATTCATCTTTGTGTGAAGAATTTTCCAAGTGTATGCATAATGAGTTTGAGATGAGTATGATGGGAGAACTTAGTTTCTTCCTTGGTCTTCAAA
TCAAACAACTCAAGGATGGCATCTTCATAAGTCAAGAAAAATACACAAGGGATTTGCTCAAGAAATTCAAATTAAATGAAGGTAAAGTTGCAAAAACTCCTATGAGCACT
ACCACTAAGCTTGACAAAGATGAAAAAGGTAAGTGTGTGGATATAAAGACTTATCGAGGTATGATCGGATCTTTACTTTATTTGACCGCTAGTAGACCCGATATCATGTT
TAGTGTATGTCTTTGTGCTAGATTTCAATCTTGTCCTAAAGAATCACATTTCCATGCCGTTAAAAGGATACTTAAATATTTGCTTGGAACTATTGATGTTGGATTATGGT
ATCCTAGAAATGTTGAGTTTAATTTGGTAGGATATTCCGATGCGGACTTTGCCGGTAGTTTACTTGACCGTAAAAGTACTAGTGGGACTTGTCAATTTCTTGGTAGTTCC
TTAGTATCTTGGTTTAGTAAAAAGCAAAATTCGGTTGCCTTATCCACTACCGAAGCGGAATATATTGCGGTTGCTAGTTGTTGTGCACAAATTCTTTGGATGAAACAAAC
TCTTTGTGATTTTGGATTAAAATTTGATAATGTGCCTATATTTTGTGATAATACTAGTGCCATAAATTTGACTAAGAATCCTATTCATCATTCTAGAACTAAGCATATAG
ATATTAGGCATCACTTTATTAGAGAGCATGTACAAAATGGTCATATTACTCTTGAGTTTGTAAGCTCCAATAATCAATTAGCGGATATATTTACCAAGCCTTTGAGTGAA
GAAAGCTTTTGTAAAAATAGGCTTGAGCTTGGAATTATTCGTTGGGATGCATCTTGA
Protein sequenceShow/hide protein sequence
MQDVNIIEKKEEGSSSLPKEWRYALSHPKDLILGNPEQGVKTRSSLNLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIRTKWVFRNK
MDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQPPGFESFDLPNHVYKLKKALYGLKQAPRAWYDRL
SKFLLENDFKMGKIDNTLFIKVKNNDMLIVQIYVDDIIFGSTNSSLCEEFSKCMHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMST
TTKLDKDEKGKCVDIKTYRGMIGSLLYLTASRPDIMFSVCLCARFQSCPKESHFHAVKRILKYLLGTIDVGLWYPRNVEFNLVGYSDADFAGSLLDRKSTSGTCQFLGSS
LVSWFSKKQNSVALSTTEAEYIAVASCCAQILWMKQTLCDFGLKFDNVPIFCDNTSAINLTKNPIHHSRTKHIDIRHHFIREHVQNGHITLEFVSSNNQLADIFTKPLSE
ESFCKNRLELGIIRWDAS