| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] | 5.1e-127 | 49.81 | Show/hide |
Query: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
MFSIMINGSLE FFHGRKG+RQG+PL F FVMVM+V SRMLN PPQ FQFHQ EKV+LT LTFADDLMIFCVAD S+SF++ET Q+FGELLGL+ANL
Subjt: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
Query: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD----EVY------LPFDEGGL
K SIF+ AS+LAANMGF +G+LP+RYL LP+L+GRLR SDC PLIQ+ITSRIRSW ARVLSFAGR QL+RS +VY LP
Subjt: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD----EVY------LPFDEGGL
Query: A----------IRDGSSWNIASTMKILW-------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGS
+RDG SWNI ST+KILW AILRK D LK HV +E+GDG CRVWLDPW+QG
Subjt: A----------IRDGSSWNIASTMKILW-------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGS
Query: IIQRFGERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIREVRSWPSVED------------------------------------------
I+++ GERV+YDA SR++ARL +F+G D EW+W VS++L+D+WDR++ VR SV D
Subjt: IIQRFGERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIREVRSWPSVED------------------------------------------
Query: ---------KDRLGTRDRLSRWDRSILLSCILCGGNSESRSGI--------------------------RGVELSWICHQGIEKGVRKKLWRLLWCAMIY
K++LGTRDRL RWD S+ +S ILC G ESR + GVELSWICHQGI VR+KLWR+L CA Y
Subjt: ---------KDRLGTRDRLSRWDRSILLSCILCGGNSESRSGI--------------------------RGVELSWICHQGIEKGVRKKLWRLLWCAMIY
Query: FIWQERNHRLHGGTVRGSMVIF
FIW+E NHRLHGG R ++IF
Subjt: FIWQERNHRLHGGTVRGSMVIF
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| KAA0057642.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.5e-115 | 49.28 | Show/hide |
Query: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
MFSIMINGSLE FFHGRKG+RQGDPL FLFVMVMEVLSRMLN PQ+FQFH EK RFGEL GLFAN
Subjt: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
Query: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD--------------EVYLPFD
KSSIF+ VN AS+LAA MGF G+LP+RYLGLP+L+GRLRS+DC PLIQ+ITSRIRS ARVLSFAGRLQL+ S Y+ +
Subjt: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD--------------EVYLPFD
Query: EGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRF
EGGL IRDG++W AST+KILW AILRK + LK HV+M++G+G RCRVWLDPW+Q G+I+++
Subjt: EGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRF
Query: GERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIR---------------------EVRSWPSVEDKDRLGTRDRLSRWDRSILLSCILCGG
GERV+YDA SR++A L +F+G D EW W + W+ IR +W ++ KDRLGTRDR RWD S+ LSCILC G
Subjt: GERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIR---------------------EVRSWPSVEDKDRLGTRDRLSRWDRSILLSCILCGG
Query: NSESRS--------------------------GIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
ESR G GVELSWICHQGI KGVR+KLWR+LWCA IYFIW ERNHRLHGG +VIF
Subjt: NSESRS--------------------------GIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
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| KAA0062333.1 putative reverse transcriptase [Cucumis melo var. makuwa] | 2.4e-108 | 48.26 | Show/hide |
Query: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
MFSIMINGSLE FFHGRKG+RQGDPL FLFVM+MEVLS MLN PQ+F FH E V+L HLTFADDLMIFC AD S+ FI+E Q+FGEL GLF NL
Subjt: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
Query: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS----------------------
+K+S+F+ VN AS LAA+MGF +G+LP+RYLGLP+LSGRLRSSDC PLIQ+ITSRIRSW ARV SFAGRLQL+R
Subjt: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS----------------------
Query: ------------------------DEVYLPFDEGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDI
EV LPF+EGGLAIRDG SWN+AST+KILW AILRK +
Subjt: ------------------------DEVYLPFDEGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDI
Query: LKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRFGERVIYDAGSRQDARLVDFMGLDCEWRWLL---VSLDLMDIWDRIR----EVRSWPSVEDKDRLGTRD
LK V+ME+ G CRVWLDPW+QGG I+ E+ + S +D W W+L + W+ IR VR W + R
Subjt: LKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRFGERVIYDAGSRQDARLVDFMGLDCEWRWLL---VSLDLMDIWDRIR----EVRSWPSVEDKDRLGTRD
Query: RLSRWDRSILLSCILCGGN----------SESRSGIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
W +I S + G+ S R G GVELSWICH+GI KGVR+KLWR+LWCA IY+IW ERNHRLHGG R +VIF
Subjt: RLSRWDRSILLSCILCGGN----------SESRSGIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
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| TYK19523.1 reverse transcriptase [Cucumis melo var. makuwa] | 5.3e-116 | 49.49 | Show/hide |
Query: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
MFSIMINGSLE FFHGRKG+RQGDPL FLFVMVMEVLSRMLN PQ+FQFH EK RFGEL GLFAN
Subjt: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
Query: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD--------------EVYLPFD
KSSIF+ VN AS+LAA MGF G+LP+RYLGLP+L+GRLRS+DC PLIQ+ITSRIRS ARVLSFAGRLQL+ S Y+ +
Subjt: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD--------------EVYLPFD
Query: EGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRF
EGGL IRDG++W AST+KILW AILRK + LK HV+M++G+G RCRVWLDPW+Q G+I++R
Subjt: EGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRF
Query: GERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIR---------------------EVRSWPSVEDKDRLGTRDRLSRWDRSILLSCILCGG
GERV+YDA SR++A L +F+G D EW W + W+ IR +W ++ KDRLGTRDR RWD S+ LSCILC G
Subjt: GERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIR---------------------EVRSWPSVEDKDRLGTRDRLSRWDRSILLSCILCGG
Query: NSESRS--------------------------GIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
ESR G GVELSWICHQGI KGVR+KLWR+LWCA IYFIW ERNHRLHGG +VIF
Subjt: NSESRS--------------------------GIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
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| XP_031737043.1 uncharacterized protein LOC116402131 [Cucumis sativus] | 3.3e-150 | 55.72 | Show/hide |
Query: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
MFSI+INGSLE FFHGRKGLRQGDPL FLFVMVMEVLSRMLN PPQNFQFHQF EKV+LTHLTFADDLMIFC ADNYSMSFIKET +RFGEL GLFANL
Subjt: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
Query: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS----------------------
+KSSIFL+ VN +AS+LAANMGF+IGHLP+RYLGLP+L GRL+S DCDPLIQ+ITSRIRSW ARVLSFAGRLQL+RS
Subjt: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS----------------------
Query: ------------------------DEVYLPFDEGGLAIRDGSSWNIASTMKILWAIL-RKWDILKDHVKMEMGDGRRCRVWLD-----------------
DEV LPFDEGGLAIRDGSSWNIAST+KILW +L + + V+ + GR W+D
Subjt: ------------------------DEVYLPFDEGGLAIRDGSSWNIASTMKILWAIL-RKWDILKDHVKMEMGDGRRCRVWLD-----------------
Query: -------------PWIQGGSIIQRFGERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIREVRSWPSVED----------------------
WIQGG+IIQ+FGERVIYDAGSR+DARLVDFM D +WRW LVSLDLMDIWD I+ VR SVED
Subjt: -------------PWIQGGSIIQRFGERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIREVRSWPSVED----------------------
Query: -----------------------------KDRLGTRDRLSRWDRSILLSCILCGGNSESRS--------------------------GIRGVELSWICHQ
+DRLGTRDRLS+WDRSI LSC+LCGGN ESR G GVELSWIC+Q
Subjt: -----------------------------KDRLGTRDRLSRWDRSILLSCILCGGNSESRS--------------------------GIRGVELSWICHQ
Query: GIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
GI KGVR+KLW LLWCA IYFIW+ERNH LHGG VR M+ F
Subjt: GIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein | 2.5e-127 | 49.81 | Show/hide |
Query: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
MFSIMINGSLE FFHGRKG+RQG+PL F FVMVM+V SRMLN PPQ FQFHQ EKV+LT LTFADDLMIFCVAD S+SF++ET Q+FGELLGL+ANL
Subjt: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
Query: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD----EVY------LPFDEGGL
K SIF+ AS+LAANMGF +G+LP+RYL LP+L+GRLR SDC PLIQ+ITSRIRSW ARVLSFAGR QL+RS +VY LP
Subjt: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD----EVY------LPFDEGGL
Query: A----------IRDGSSWNIASTMKILW-------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGS
+RDG SWNI ST+KILW AILRK D LK HV +E+GDG CRVWLDPW+QG
Subjt: A----------IRDGSSWNIASTMKILW-------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGS
Query: IIQRFGERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIREVRSWPSVED------------------------------------------
I+++ GERV+YDA SR++ARL +F+G D EW+W VS++L+D+WDR++ VR SV D
Subjt: IIQRFGERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIREVRSWPSVED------------------------------------------
Query: ---------KDRLGTRDRLSRWDRSILLSCILCGGNSESRSGI--------------------------RGVELSWICHQGIEKGVRKKLWRLLWCAMIY
K++LGTRDRL RWD S+ +S ILC G ESR + GVELSWICHQGI VR+KLWR+L CA Y
Subjt: ---------KDRLGTRDRLSRWDRSILLSCILCGGNSESRSGI--------------------------RGVELSWICHQGIEKGVRKKLWRLLWCAMIY
Query: FIWQERNHRLHGGTVRGSMVIF
FIW+E NHRLHGG R ++IF
Subjt: FIWQERNHRLHGGTVRGSMVIF
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| A0A5A7TZS0 Reverse transcriptase domain-containing protein | 1.7e-107 | 46.92 | Show/hide |
Query: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
MFSIMINGSLE FF+GRKGLRQGDPL FLFVMVMEVLSRMLN PQ+F+FH EKV+LTHLTFADDLMIFC AD S+SFI+E Q+FGE GLFAN
Subjt: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
Query: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS----------------------
KSSIF++ VN AS LAA +G + P LRS DC PLIQ+ITSRIRSW ARVLSFAGRLQL+RS
Subjt: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS----------------------
Query: ------------------------DEVYLPFDEGGLAIRDGSSWNIASTMKI-------LWAILRKWDILKDHVKMEMGDGRRCRVWLDPWI--QGGSII
+V LPF+EGGL IRDG SWNIA+T+KI LW + ILK ++ D R R W I + +
Subjt: ------------------------DEVYLPFDEGGLAIRDGSSWNIASTMKI-------LWAILRKWDILKDHVKMEMGDGRRCRVWLDPWI--QGGSII
Query: QRFGERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIREVRSWPSVED--------------------------------------------
GERV+YDA SR++A+L DF+ + EW W VSL+L+D+W+R++EV SV D
Subjt: QRFGERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIREVRSWPSVED--------------------------------------------
Query: -------KDRLGTRDRLSRWDRSILLSCILCGGNSESRS--------------------------GIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFI
KDRL TRDRL RWD SI LSCILC G ESR G GVELSWICH+GI KGVR+KLWR+LWCA IYFI
Subjt: -------KDRLGTRDRLSRWDRSILLSCILCGGNSESRS--------------------------GIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFI
Query: WQERNHRLHGGTVRGSMVIF
W ERNHRLHGG R +++F
Subjt: WQERNHRLHGGTVRGSMVIF
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| A0A5A7UP65 Reverse transcriptase | 7.5e-116 | 49.28 | Show/hide |
Query: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
MFSIMINGSLE FFHGRKG+RQGDPL FLFVMVMEVLSRMLN PQ+FQFH EK RFGEL GLFAN
Subjt: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
Query: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD--------------EVYLPFD
KSSIF+ VN AS+LAA MGF G+LP+RYLGLP+L+GRLRS+DC PLIQ+ITSRIRS ARVLSFAGRLQL+ S Y+ +
Subjt: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD--------------EVYLPFD
Query: EGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRF
EGGL IRDG++W AST+KILW AILRK + LK HV+M++G+G RCRVWLDPW+Q G+I+++
Subjt: EGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRF
Query: GERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIR---------------------EVRSWPSVEDKDRLGTRDRLSRWDRSILLSCILCGG
GERV+YDA SR++A L +F+G D EW W + W+ IR +W ++ KDRLGTRDR RWD S+ LSCILC G
Subjt: GERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIR---------------------EVRSWPSVEDKDRLGTRDRLSRWDRSILLSCILCGG
Query: NSESRS--------------------------GIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
ESR G GVELSWICHQGI KGVR+KLWR+LWCA IYFIW ERNHRLHGG +VIF
Subjt: NSESRS--------------------------GIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
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| A0A5A7V2L9 Putative reverse transcriptase | 1.2e-108 | 48.26 | Show/hide |
Query: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
MFSIMINGSLE FFHGRKG+RQGDPL FLFVM+MEVLS MLN PQ+F FH E V+L HLTFADDLMIFC AD S+ FI+E Q+FGEL GLF NL
Subjt: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
Query: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS----------------------
+K+S+F+ VN AS LAA+MGF +G+LP+RYLGLP+LSGRLRSSDC PLIQ+ITSRIRSW ARV SFAGRLQL+R
Subjt: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS----------------------
Query: ------------------------DEVYLPFDEGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDI
EV LPF+EGGLAIRDG SWN+AST+KILW AILRK +
Subjt: ------------------------DEVYLPFDEGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDI
Query: LKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRFGERVIYDAGSRQDARLVDFMGLDCEWRWLL---VSLDLMDIWDRIR----EVRSWPSVEDKDRLGTRD
LK V+ME+ G CRVWLDPW+QGG I+ E+ + S +D W W+L + W+ IR VR W + R
Subjt: LKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRFGERVIYDAGSRQDARLVDFMGLDCEWRWLL---VSLDLMDIWDRIR----EVRSWPSVEDKDRLGTRD
Query: RLSRWDRSILLSCILCGGN----------SESRSGIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
W +I S + G+ S R G GVELSWICH+GI KGVR+KLWR+LWCA IY+IW ERNHRLHGG R +VIF
Subjt: RLSRWDRSILLSCILCGGN----------SESRSGIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
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| A0A5D3D7P6 Reverse transcriptase | 2.6e-116 | 49.49 | Show/hide |
Query: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
MFSIMINGSLE FFHGRKG+RQGDPL FLFVMVMEVLSRMLN PQ+FQFH EK RFGEL GLFAN
Subjt: MFSIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANL
Query: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD--------------EVYLPFD
KSSIF+ VN AS+LAA MGF G+LP+RYLGLP+L+GRLRS+DC PLIQ+ITSRIRS ARVLSFAGRLQL+ S Y+ +
Subjt: SKSSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRSD--------------EVYLPFD
Query: EGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRF
EGGL IRDG++W AST+KILW AILRK + LK HV+M++G+G RCRVWLDPW+Q G+I++R
Subjt: EGGLAIRDGSSWNIASTMKILW--------------------------------------AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRF
Query: GERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIR---------------------EVRSWPSVEDKDRLGTRDRLSRWDRSILLSCILCGG
GERV+YDA SR++A L +F+G D EW W + W+ IR +W ++ KDRLGTRDR RWD S+ LSCILC G
Subjt: GERVIYDAGSRQDARLVDFMGLDCEWRWLLVSLDLMDIWDRIR---------------------EVRSWPSVEDKDRLGTRDRLSRWDRSILLSCILCGG
Query: NSESRS--------------------------GIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
ESR G GVELSWICHQGI KGVR+KLWR+LWCA IYFIW ERNHRLHGG +VIF
Subjt: NSESRS--------------------------GIRGVELSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSMVIF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 8.0e-14 | 29.38 | Show/hide |
Query: SIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANLSK
+I++NG E F + G RQG PL LF +V+EVL+R + + E+V+L+ FADD++++ S + + F ++ G N+ K
Subjt: SIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANLSK
Query: SSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSG--RLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLR
S FL NR SQ+ + FTI I+YLG+ + L + PL+++I W S+ GR+ +++
Subjt: SSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSG--RLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLR
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| P08548 LINE-1 reverse transcriptase homolog | 1.2e-09 | 25.99 | Show/hide |
Query: SIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANLSK
+I++NG + F R G RQG PL LF +VMEVL+ + H SE+++L+ FADD++++ S + + E + + + G N K
Subjt: SIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANLSK
Query: SSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSG--RLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLR
S F+ N + ++ FT+ ++YLG+ + L + + L ++I + W S+ GR+ +++
Subjt: SSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLSG--RLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLR
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| P0C2F6 Putative ribonuclease H protein At1g65750 | 4.4e-04 | 19.7 | Show/hide |
Query: LPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS----------------------------------------------DEVYLPFDEGG
+PVL R+ ++++++SR+ W + LSFAGRL L ++ +V P EGG
Subjt: LPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS----------------------------------------------DEVYLPFDEGG
Query: LAIRDGSSWNIASTMKILWAILR----------------------KW-------------------DILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQ
L +R S N A K+ W +L+ +W D++ V GDG++ R W D W+ G +++
Subjt: LAIRDGSSWNIASTMKILWAILR----------------------KW-------------------DILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQ
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| P11369 LINE-1 retrotransposable element ORF2 protein | 2.4e-10 | 27.12 | Show/hide |
Query: SIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANLSK
+I +NG E + G RQG PL +LF +V+EVL+R + + E+V+++ L ADD++++ S + FGE++G N +K
Subjt: SIMINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQFHQFSEKVRLTHLTFADDLMIFCVADNYSMSFIKETSQRFGELLGLFANLSK
Query: SSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLS--GRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLR
S FL N+ ++ F+I I+YLG+ + L + L ++I +R W S+ GR+ +++
Subjt: SSIFLMEVNRVEASQLAANMGFTIGHLPIRYLGLPVLS--GRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | 6.0e-17 | 31.05 | Show/hide |
Query: FTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS---------------------------------------------
F G LP+RYLGLP+L+ ++ +SD PL+++I RI W AR LSFAGRLQL+ S
Subjt: FTIGHLPIRYLGLPVLSGRLRSSDCDPLIQQITSRIRSWCARVLSFAGRLQLLRS---------------------------------------------
Query: -DEVYLPFDEGGLAIRD------GSSWNIASTMKI---LW-AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRFGERVIYDAG
+V P DEGGL IR GS W+I+ + +W IL+ + VK ++ +G W D W + G +I G R D G
Subjt: -DEVYLPFDEGGLAIRD------GSSWNIASTMKI---LW-AILRKWDILKDHVKMEMGDGRRCRVWLDPWIQGGSIIQRFGERVIYDAG
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| AT4G05095.1 BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT4G04650.1) | 2.4e-05 | 29.41 | Show/hide |
Query: LSRWDRSILLSCILCGGNSESRSGI---RGVE----------------------LSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSM
+ RW SI C+LC GN+E R + GV L+W+ + + + +L++ A IYF+W+ERN RLH R S
Subjt: LSRWDRSILLSCILCGGNSESRSGI---RGVE----------------------LSWICHQGIEKGVRKKLWRLLWCAMIYFIWQERNHRLHGGTVRGSM
Query: VI
I
Subjt: VI
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| ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase) | 3.4e-04 | 35.82 | Show/hide |
Query: MINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQ---FHQFSEKVRLTHLTFADD
+ING+ + +GLRQGDPL +LF++ EVLS + + + + R+ HL FADD
Subjt: MINGSLEEFFHGRKGLRQGDPLFWFLFVMVMEVLSRMLNSPPQNFQ---FHQFSEKVRLTHLTFADD
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