; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI06G15780 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI06G15780
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr6:14134729..14138290
RNA-Seq ExpressionCSPI06G15780
SyntenyCSPI06G15780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]7.1e-9950Show/hide
Query:  LQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGS
        L+S DC PLIQ IT RIR W+ARVLSFAGRLQLV SVLRSLQVYWASVFVLP  VH ++DKILRSYLWR KEEGRG +KVAW +VCLPF+EGGL IRDG 
Subjt:  LQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGS

Query:  SWNI-----LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILRWFNYPA--VRERVIYDAGSLQDARLVEFMGLDGERRWPL----------
        SWNI     +LL    SLWVAW+EAYILKG+SLW++D+ VGRSWC RAILR        V ERV+YDA S ++A+L +F+  +GE  WP           
Subjt:  SWNI-----LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILRWFNYPA--VRERVIYDAGSLQDARLVEFMGLDGERRWPL----------

Query:  --------------------------------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAISD----------------------------------
                                         I P   RV W  LLW   NIPKHS CAWLAI D                                  
Subjt:  --------------------------------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAISD----------------------------------

Query:  --------------------RIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH
                            RIG+WG ELSWICH+GIGKGVR+KLWR+LW ATI FIW ER+H LH G   +P+++F LI + IRARA SW +  H
Subjt:  --------------------RIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH

KAA0059752.1 F17F8.5 [Cucumis melo var. makuwa]4.0e-10253.81Show/hide
Query:  GDNTVEASQLAANMGFTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSY
        G N   AS LAA MGF  G++P+RYL LPLL+ RL+S+D  PLIQ IT RIR W+ARVLSFAGRLQLV  VLRSLQVYWASVFVLP  VH ++DKIL SY
Subjt:  GDNTVEASQLAANMGFTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSY

Query:  LWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR------------
        LWR KEEGRG +KVAW +VCLPF+E GL IRDG SWNI        L+L  S SLWVAWV+AYILKGRSLW++D+ VGRSW  RAILR            
Subjt:  LWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR------------

Query:  ---------WFN--------YPAVRERVIYDAGSLQDARLVEFMGLDGERRWPL----------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAISDRI
                 W +           V ERV+YDA S ++ARL +F+  DGE  WP            +RP   +V W  LLW   NIPK+S CAWLAI DR+
Subjt:  ---------WFN--------YPAVRERVIYDAGSLQDARLVEFMGLDGERRWPL----------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAISDRI

Query:  G-------YWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH
        G       YW             + VR+KLWR+LW ATI FIW ER+H LH G   +P+VIF LI S IRAR  SW +  H
Subjt:  G-------YWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH

KAA0062333.1 putative reverse transcriptase [Cucumis melo var. makuwa]3.4e-10154.07Show/hide
Query:  GDNTVEASQLAANMGFTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSY
        G N+  AS LAA+MGF +G++PVRYL LPLLS RL+SSDC PLIQ IT RIR W ARV SFAGRLQL+  VLRSLQV+WASVFVLP  VH  +DKILRSY
Subjt:  GDNTVEASQLAANMGFTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSY

Query:  LWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR------------
        LWR KEEGRG VKVAW EVCLPF+EGGLAIRDG SWN+        L+L  S SLWVAWVEAYILKGRSLWE+D+ VGRSWC RAILR            
Subjt:  LWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR------------

Query:  -------------WFNYPAVRERVIYDAGSLQDARLVEFMGLDG----ERRWPLTIRPHSSRVGWS-------VLLWDERNIPKHSV-CAW---------
                     W     + E+ +    S++D R V  +G  G       W   IRP   RV W+         ++  R +   ++ C++         
Subjt:  -------------WFNYPAVRERVIYDAGSLQDARLVEFMGLDG----ERRWPLTIRPHSSRVGWS-------VLLWDERNIPKHSV-CAW---------

Query:  -----LAISDRIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASW
             +A S RIG+WG ELSWICH+GIGKGVR+KLWR+LW ATI +IW ER+H LH G    P+VIF LI + IRARA SW
Subjt:  -----LAISDRIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASW

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]3.5e-9851.55Show/hide
Query:  PLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGL
        P  S  L SS     I  IT RIR W+ARVLSFAGRLQLV SVLRSLQVYWASVFVLP  VH ++DKILRSYLW+ KEEGRG +KVAW +VCLPF+EGGL
Subjt:  PLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGL

Query:  AIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR-------------------------WFNYPA----VRERV
         IRDG SWNI        L+L  S SLWVAW+EAYILKG+SLW++D+ VGRSWCFRAILR                         W    A    V ERV
Subjt:  AIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR-------------------------WFNYPA----VRERV

Query:  IYDAGSLQDARLVEFMGLDGERRWPL------------------------------------------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAI
        +YDA S ++ARL +F+  +GE  WP                                            I P  SRV W  LLW   NIPKHS CAWLAI
Subjt:  IYDAGSLQDARLVEFMGLDGERRWPL------------------------------------------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAI

Query:  SD----------RIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH
         D          RIG+WG ELSWI H+GIGKGVR+KLWR+LW ATI FIW ER+H LH G   +P+++F LI + IRARA SW +  H
Subjt:  SD----------RIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH

XP_031737043.1 uncharacterized protein LOC116402131 [Cucumis sativus]1.3e-11655.96Show/hide
Query:  MGDNTVEASQLAANMGFTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRS
        +G N+ +AS+LAANMGF+IGH+PVRYL LPLL  RLQS DCDPLIQ IT RIR WSARVLSFAGRLQLV SVLRSLQVYWASVF+LPMKVHRD+DKILRS
Subjt:  MGDNTVEASQLAANMGFTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRS

Query:  YLWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSL--WEIDAGVGRSWC-----FRAILRWFNY
        YLWR KEEGRG  KVAWDEVCLPFDEGGLAIRDGSSWNI        LLLVKS SLWVAWVEAYILKGRS+  W +D GV    C      + ILRW   
Subjt:  YLWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSL--WEIDAGVGRSWC-----FRAILRWFNY

Query:  PA----------------VRERVIYDAGSLQDARLVEFMGLDGERRWPL------------------------------------------TIRPHSSRV
         A                  ERVIYDAGS +DARLV+FM  DG+ RWPL                                          TIRPHSSRV
Subjt:  PA----------------VRERVIYDAGSLQDARLVEFMGLDGERRWPL------------------------------------------TIRPHSSRV

Query:  GWSVLLWDERNIPKHSVCAWLAISD------------------------------------------------------RIGYWGFELSWICHQGIGKGV
        GWS LLWD  NIPKHS  AWLAI D                                                      RIGYWG ELSWIC+QGIGKGV
Subjt:  GWSVLLWDERNIPKHSVCAWLAISD------------------------------------------------------RIGYWGFELSWICHQGIGKGV

Query:  RKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIF
        R+KLW LLW ATI FIW+ER+H+LH GAV EPM+ F
Subjt:  RKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIF

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein1.7e-9851.55Show/hide
Query:  PLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGL
        P  S  L SS     I  IT RIR W+ARVLSFAGRLQLV SVLRSLQVYWASVFVLP  VH ++DKILRSYLW+ KEEGRG +KVAW +VCLPF+EGGL
Subjt:  PLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGL

Query:  AIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR-------------------------WFNYPA----VRERV
         IRDG SWNI        L+L  S SLWVAW+EAYILKG+SLW++D+ VGRSWCFRAILR                         W    A    V ERV
Subjt:  AIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR-------------------------WFNYPA----VRERV

Query:  IYDAGSLQDARLVEFMGLDGERRWPL------------------------------------------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAI
        +YDA S ++ARL +F+  +GE  WP                                            I P  SRV W  LLW   NIPKHS CAWLAI
Subjt:  IYDAGSLQDARLVEFMGLDGERRWPL------------------------------------------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAI

Query:  SD----------RIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH
         D          RIG+WG ELSWI H+GIGKGVR+KLWR+LW ATI FIW ER+H LH G   +P+++F LI + IRARA SW +  H
Subjt:  SD----------RIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH

A0A5A7TZS0 Reverse transcriptase domain-containing protein3.5e-9950Show/hide
Query:  LQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGS
        L+S DC PLIQ IT RIR W+ARVLSFAGRLQLV SVLRSLQVYWASVFVLP  VH ++DKILRSYLWR KEEGRG +KVAW +VCLPF+EGGL IRDG 
Subjt:  LQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGS

Query:  SWNI-----LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILRWFNYPA--VRERVIYDAGSLQDARLVEFMGLDGERRWPL----------
        SWNI     +LL    SLWVAW+EAYILKG+SLW++D+ VGRSWC RAILR        V ERV+YDA S ++A+L +F+  +GE  WP           
Subjt:  SWNI-----LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILRWFNYPA--VRERVIYDAGSLQDARLVEFMGLDGERRWPL----------

Query:  --------------------------------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAISD----------------------------------
                                         I P   RV W  LLW   NIPKHS CAWLAI D                                  
Subjt:  --------------------------------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAISD----------------------------------

Query:  --------------------RIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH
                            RIG+WG ELSWICH+GIGKGVR+KLWR+LW ATI FIW ER+H LH G   +P+++F LI + IRARA SW +  H
Subjt:  --------------------RIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH

A0A5A7UV01 F17F8.52.0e-10253.81Show/hide
Query:  GDNTVEASQLAANMGFTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSY
        G N   AS LAA MGF  G++P+RYL LPLL+ RL+S+D  PLIQ IT RIR W+ARVLSFAGRLQLV  VLRSLQVYWASVFVLP  VH ++DKIL SY
Subjt:  GDNTVEASQLAANMGFTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSY

Query:  LWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR------------
        LWR KEEGRG +KVAW +VCLPF+E GL IRDG SWNI        L+L  S SLWVAWV+AYILKGRSLW++D+ VGRSW  RAILR            
Subjt:  LWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR------------

Query:  ---------WFN--------YPAVRERVIYDAGSLQDARLVEFMGLDGERRWPL----------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAISDRI
                 W +           V ERV+YDA S ++ARL +F+  DGE  WP            +RP   +V W  LLW   NIPK+S CAWLAI DR+
Subjt:  ---------WFN--------YPAVRERVIYDAGSLQDARLVEFMGLDGERRWPL----------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAISDRI

Query:  G-------YWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH
        G       YW             + VR+KLWR+LW ATI FIW ER+H LH G   +P+VIF LI S IRAR  SW +  H
Subjt:  G-------YWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH

A0A5A7V2L9 Putative reverse transcriptase1.7e-10154.07Show/hide
Query:  GDNTVEASQLAANMGFTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSY
        G N+  AS LAA+MGF +G++PVRYL LPLLS RL+SSDC PLIQ IT RIR W ARV SFAGRLQL+  VLRSLQV+WASVFVLP  VH  +DKILRSY
Subjt:  GDNTVEASQLAANMGFTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSY

Query:  LWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR------------
        LWR KEEGRG VKVAW EVCLPF+EGGLAIRDG SWN+        L+L  S SLWVAWVEAYILKGRSLWE+D+ VGRSWC RAILR            
Subjt:  LWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR------------

Query:  -------------WFNYPAVRERVIYDAGSLQDARLVEFMGLDG----ERRWPLTIRPHSSRVGWS-------VLLWDERNIPKHSV-CAW---------
                     W     + E+ +    S++D R V  +G  G       W   IRP   RV W+         ++  R +   ++ C++         
Subjt:  -------------WFNYPAVRERVIYDAGSLQDARLVEFMGLDG----ERRWPLTIRPHSSRVGWS-------VLLWDERNIPKHSV-CAW---------

Query:  -----LAISDRIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASW
             +A S RIG+WG ELSWICH+GIGKGVR+KLWR+LW ATI +IW ER+H LH G    P+VIF LI + IRARA SW
Subjt:  -----LAISDRIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASW

A0A5D3BDZ6 Zf-RVT domain-containing protein1.7e-9851.55Show/hide
Query:  PLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGL
        P  S  L SS     I  IT RIR W+ARVLSFAGRLQLV SVLRSLQVYWASVFVLP  VH ++DKILRSYLW+ KEEGRG +KVAW +VCLPF+EGGL
Subjt:  PLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGL

Query:  AIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR-------------------------WFNYPA----VRERV
         IRDG SWNI        L+L  S SLWVAW+EAYILKG+SLW++D+ VGRSWCFRAILR                         W    A    V ERV
Subjt:  AIRDGSSWNI--------LLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILR-------------------------WFNYPA----VRERV

Query:  IYDAGSLQDARLVEFMGLDGERRWPL------------------------------------------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAI
        +YDA S ++ARL +F+  +GE  WP                                            I P  SRV W  LLW   NIPKHS CAWLAI
Subjt:  IYDAGSLQDARLVEFMGLDGERRWPL------------------------------------------TIRPHSSRVGWSVLLWDERNIPKHSVCAWLAI

Query:  SD----------RIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH
         D          RIG+WG ELSWI H+GIGKGVR+KLWR+LW ATI FIW ER+H LH G   +P+++F LI + IRARA SW +  H
Subjt:  SD----------RIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVH

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.8e-1532.61Show/hide
Query:  LPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGG
        +P+L +R+       +++ ++ R+  W  + LSFAGRL L  +VL S+ V+  S  +LP  +   +D++ R++LW S  E + +  V W +VC P  EGG
Subjt:  LPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGG

Query:  LAIRDGSSWNILLLVKSSSLWVAWVEAYILKGRSLWEI
        L +R   S N  L+ K     V W    + +  SLW +
Subjt:  LAIRDGSSWNILLLVKSSSLWVAWVEAYILKGRSLWEI

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.9e-2945.75Show/hide
Query:  FTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVA
        F  G +PVRYL LPLL++++ +SD  PL++ I  RI  W+AR LSFAGRLQL+ SV+ SL  +W S F LP    ++ID I  S+LW   E    + KVA
Subjt:  FTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVA

Query:  WDEVCLPFDEGGLAIRD------GSSWNILLLVKSSSLWVAWVEAYILKGRSL
        W +VC P DEGGL IR       GS W+I      ++   +W+   ILK R+L
Subjt:  WDEVCLPFDEGGLAIRD------GSSWNILLLVKSSSLWVAWVEAYILKGRSL

AT4G29090.1 Ribonuclease H-like superfamily protein4.4e-0634.29Show/hide
Query:  SLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNILLLVK
        +L  Y  + F+LP  V + I  +L  + WR+K+E +G    AWD +     EGG+  +D  ++N+ LL K
Subjt:  SLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGRGEVKVAWDEVCLPFDEGGLAIRDGSSWNILLLVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGATAATACTGTGGAAGCTTCTCAGCTTGCTGCGAACATGGGTTTTACCATTGGTCACATCCCTGTTCGTTATCTGTGTCTTCCTCTTCTCTCAAGAAGGTTACA
AAGCTCTGATTGTGATCCCCTTATTCAACTAATTACCGGTCGTATTCGGTGTTGGTCTGCTAGAGTGTTATCTTTTGCAGGTAGACTTCAGCTTGTTCTCTCAGTCCTAA
GGAGTCTTCAGGTTTATTGGGCTAGTGTGTTCGTGCTTCCGATGAAAGTCCATAGAGACATTGATAAGATTTTGAGGTCTTATCTGTGGAGAAGTAAGGAGGAGGGTAGA
GGTGAAGTTAAAGTTGCCTGGGATGAAGTTTGTCTTCCTTTTGATGAGGGAGGTCTTGCTATTCGCGATGGATCGTCTTGGAATATATTGCTGCTAGTTAAATCTAGTAG
TTTGTGGGTTGCTTGGGTGGAAGCTTACATCCTTAAAGGGAGATCGTTGTGGGAGATCGATGCTGGGGTGGGACGATCTTGGTGTTTTAGGGCCATCTTGCGGTGGTTCA
ATTATCCAGCAGTTAGGGAGAGGGTGATCTATGATGCGGGTAGTCTGCAAGATGCGAGGCTTGTGGAGTTCATGGGTCTGGATGGTGAACGGAGGTGGCCGCTTACTATT
CGTCCTCATAGTAGTAGGGTTGGCTGGTCGGTTTTACTGTGGGATGAGCGAAATATTCCTAAGCACTCCGTTTGTGCTTGGTTGGCTATCAGCGATAGGATCGGGTATTG
GGGGTTTGAGTTATCTTGGATTTGTCATCAAGGGATTGGGAAGGGAGTGAGGAAAAAGTTGTGGCGTCTTCTCTGGTATGCTACAATTGATTTCATTTGGCAAGAGCGTG
ATCATCATCTTCATAGAGGTGCAGTTCATGAGCCTATGGTTATTTTCCAGCTCATTCGGTCGTGTATTAGAGCTCGTGCTGCTTCTTGGTTCGATGGAGTTCATGGTGCT
GTGAGGTCCACATTGTTGTTGCATAAAATTTTCATTACCTTTTCAAAAAAAACATCGAACCACCGAGTAGTTAGATGTGAACTTTCAAGGAATCCGACACCGTTCTATGT
CCGGTCGTCTCTTTCTAGACCATTGGCCCTTTCTTCGGAGTTTTGGGACGGAACCAAAAAACAGAGCCTTCGAGCCCGTTCTAAGTCCTGTCGTCTCTTTCTAGGCACAT
TGGCCCTTTCTTCGGTGTTTTGGGATGGAACCAAAAAATCGAGTCTGGGGCATCAACGTTTGGCTTTTTCTATTGGCCCTTTCTTCGACATTTTGGGACTGAACCAAAAA
ACTGAGTCTGGGGCATCACCGCCATTGGCCCTTTCATCGACGTTTTGGGACGAAACTAAAAAACTGAGTCTTGGGCATCACCGTTCGGCTTTTGTGAGCAAGAAACTTCA
ATATCACTCAAAATTGGAGCACCCACCTAAGTTCAAGATACAAGAGCGTAACAATGCTCACAAAACAAGCAACTGGACAAAACAACCAAAAGAATCCAAAAACAACCCAC
CCGAAAGAAAGCAACCCCACAGCCCGGGGACAAGGGTGAATACGACTGCTATTACACTTATTCCTAATAGGAATGGTGCTGATCGGTTGGAGGATTTCAGGCCTATATCC
TACTATAACGTTATGTACAAGTGCATTTCAAGAATATTGGCAGATAGGCTTCGTGTGTGGCTTCCTTCTTTTTCTCAGTTGAATAGGATTGGATGCAGCGGGTATTCCTA
CATTCTTTCATTCAGAACTGAGGCCACAATCCCGAGAGTTAGGGAGTGGAACTTCCCTAGTGGGAGGCCTCAGATGACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGATAATACTGTGGAAGCTTCTCAGCTTGCTGCGAACATGGGTTTTACCATTGGTCACATCCCTGTTCGTTATCTGTGTCTTCCTCTTCTCTCAAGAAGGTTACA
AAGCTCTGATTGTGATCCCCTTATTCAACTAATTACCGGTCGTATTCGGTGTTGGTCTGCTAGAGTGTTATCTTTTGCAGGTAGACTTCAGCTTGTTCTCTCAGTCCTAA
GGAGTCTTCAGGTTTATTGGGCTAGTGTGTTCGTGCTTCCGATGAAAGTCCATAGAGACATTGATAAGATTTTGAGGTCTTATCTGTGGAGAAGTAAGGAGGAGGGTAGA
GGTGAAGTTAAAGTTGCCTGGGATGAAGTTTGTCTTCCTTTTGATGAGGGAGGTCTTGCTATTCGCGATGGATCGTCTTGGAATATATTGCTGCTAGTTAAATCTAGTAG
TTTGTGGGTTGCTTGGGTGGAAGCTTACATCCTTAAAGGGAGATCGTTGTGGGAGATCGATGCTGGGGTGGGACGATCTTGGTGTTTTAGGGCCATCTTGCGGTGGTTCA
ATTATCCAGCAGTTAGGGAGAGGGTGATCTATGATGCGGGTAGTCTGCAAGATGCGAGGCTTGTGGAGTTCATGGGTCTGGATGGTGAACGGAGGTGGCCGCTTACTATT
CGTCCTCATAGTAGTAGGGTTGGCTGGTCGGTTTTACTGTGGGATGAGCGAAATATTCCTAAGCACTCCGTTTGTGCTTGGTTGGCTATCAGCGATAGGATCGGGTATTG
GGGGTTTGAGTTATCTTGGATTTGTCATCAAGGGATTGGGAAGGGAGTGAGGAAAAAGTTGTGGCGTCTTCTCTGGTATGCTACAATTGATTTCATTTGGCAAGAGCGTG
ATCATCATCTTCATAGAGGTGCAGTTCATGAGCCTATGGTTATTTTCCAGCTCATTCGGTCGTGTATTAGAGCTCGTGCTGCTTCTTGGTTCGATGGAGTTCATGGTGCT
GTGAGGTCCACATTGTTGTTGCATAAAATTTTCATTACCTTTTCAAAAAAAACATCGAACCACCGAGTAGTTAGATGTGAACTTTCAAGGAATCCGACACCGTTCTATGT
CCGGTCGTCTCTTTCTAGACCATTGGCCCTTTCTTCGGAGTTTTGGGACGGAACCAAAAAACAGAGCCTTCGAGCCCGTTCTAAGTCCTGTCGTCTCTTTCTAGGCACAT
TGGCCCTTTCTTCGGTGTTTTGGGATGGAACCAAAAAATCGAGTCTGGGGCATCAACGTTTGGCTTTTTCTATTGGCCCTTTCTTCGACATTTTGGGACTGAACCAAAAA
ACTGAGTCTGGGGCATCACCGCCATTGGCCCTTTCATCGACGTTTTGGGACGAAACTAAAAAACTGAGTCTTGGGCATCACCGTTCGGCTTTTGTGAGCAAGAAACTTCA
ATATCACTCAAAATTGGAGCACCCACCTAAGTTCAAGATACAAGAGCGTAACAATGCTCACAAAACAAGCAACTGGACAAAACAACCAAAAGAATCCAAAAACAACCCAC
CCGAAAGAAAGCAACCCCACAGCCCGGGGACAAGGGTGAATACGACTGCTATTACACTTATTCCTAATAGGAATGGTGCTGATCGGTTGGAGGATTTCAGGCCTATATCC
TACTATAACGTTATGTACAAGTGCATTTCAAGAATATTGGCAGATAGGCTTCGTGTGTGGCTTCCTTCTTTTTCTCAGTTGAATAGGATTGGATGCAGCGGGTATTCCTA
CATTCTTTCATTCAGAACTGAGGCCACAATCCCGAGAGTTAGGGAGTGGAACTTCCCTAGTGGGAGGCCTCAGATGACCTGA
Protein sequenceShow/hide protein sequence
MGDNTVEASQLAANMGFTIGHIPVRYLCLPLLSRRLQSSDCDPLIQLITGRIRCWSARVLSFAGRLQLVLSVLRSLQVYWASVFVLPMKVHRDIDKILRSYLWRSKEEGR
GEVKVAWDEVCLPFDEGGLAIRDGSSWNILLLVKSSSLWVAWVEAYILKGRSLWEIDAGVGRSWCFRAILRWFNYPAVRERVIYDAGSLQDARLVEFMGLDGERRWPLTI
RPHSSRVGWSVLLWDERNIPKHSVCAWLAISDRIGYWGFELSWICHQGIGKGVRKKLWRLLWYATIDFIWQERDHHLHRGAVHEPMVIFQLIRSCIRARAASWFDGVHGA
VRSTLLLHKIFITFSKKTSNHRVVRCELSRNPTPFYVRSSLSRPLALSSEFWDGTKKQSLRARSKSCRLFLGTLALSSVFWDGTKKSSLGHQRLAFSIGPFFDILGLNQK
TESGASPPLALSSTFWDETKKLSLGHHRSAFVSKKLQYHSKLEHPPKFKIQERNNAHKTSNWTKQPKESKNNPPERKQPHSPGTRVNTTAITLIPNRNGADRLEDFRPIS
YYNVMYKCISRILADRLRVWLPSFSQLNRIGCSGYSYILSFRTEATIPRVREWNFPSGRPQMT